CX043382

Overview
NameCX043382
Unique NameCX043382
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length768
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043382 vs. ExPASy Swiss-Prot
Match: CHIB_POPTR (Acidic endochitinase WIN6.2B OS=Populus trichocarpa PE=2 SV=2)

HSP 1 Score: 196.052 bits (497), Expect = 1.842e-49
Identity = 97/198 (48.99%), Postives = 115/198 (58.08%), Query Frame = -2
Query:  177 NETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPNYPCRGKYYGRGPIQLSWNYNYLRCXXXXXXXXXXLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGG-NAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQRPYGLNLM 767
            ++ MRKREIAAF  QT HET G WP A G +Y WGYC +                              NYNY  C             P+L+ TDP ++FK+A+WFWMT Q PKPSCH VI + W PSA D  AGR+PGYG+ TNIINGGIECGQGG N A  NRIGF+ T+C   G   G +LDCY QRP+G  L+
Sbjct:  132 DDLMRKREIAAFLGQTSHETNGWWPAAQGDQYDWGYCHM------------------------------NYNYGLCGDDLNLPLL--QEPELVETDPFIAFKTALWFWMTPQSPKPSCHAVITESWTPSAADSEAGRVPGYGVITNIINGGIECGQGGPNNANENRIGFYKTYCDSLGTTYGSNLDCYQQRPFGYGLL 297          
BLAST of CX043382 vs. ExPASy Swiss-Prot
Match: CHI8_ORYSJ (Chitinase 8 OS=Oryza sativa subsp. japonica GN=Cht8 PE=2 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.194e-48
Identity = 99/191 (51.83%), Postives = 120/191 (62.83%), Query Frame = -2
Query:  192 KREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEV----SPPSDYCDPNYPCRGKYYGRGPIQLSWNYNYLRCXXXXXXXXXXLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQRPY 752
            +RE+AAFF QT HETTGG   +   ++ WGYCF  E+    SPP             YYGRGPIQL+   NY               NPDL++TD V+SFK+AIWFWMTAQ  KPSCH+VI+  W PSA D  AGR+PGYG+ TNIINGGIECG G N A  +RIG++  +C   G   G +LDCYNQR +
Sbjct:   85 RRELAAFFGQTSHETTGGTRGS-SDQFQWGYCFKEEINKATSPP-------------YYGRGPIQLTGQSNYQAAGNALGLDLV--GNPDLVSTDAVVSFKTAIWFWMTAQGNKPSCHDVILGRWTPSAADTAAGRVPGYGVITNIINGGIECGVGQNDANVDRIGYYKRYCDMLGAGYGSNLDCYNQRNF 259          
BLAST of CX043382 vs. ExPASy Swiss-Prot
Match: CHIT_AVESA (Endochitinase (Fragments) OS=Avena sativa PE=1 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 3.596e-45
Identity = 91/189 (48.15%), Postives = 116/189 (61.38%), Query Frame = -2
Query:  192 MRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPNYPCRGKYYGRGPIQLSWNYNYLRCXXXXXXXXXXLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQRPY 758
            +RKRE+AAF AQT HETTGGWP AP G Y        E+   SDY           +GRGPIQ+S+NYNY               NPDL+ +D  + FK+A+WFWMT Q PKPS H+VI   W PS+ D  AGR+PGYG+ TNII+GG+ECG+G  + V +RIG++            D+LDCYNQ+P+
Sbjct:   43 VRKREVAAFLAQTSHETTGGWPTAPDGPY--------ELGSTSDY-----------FGRGPIQISYNYNYGAAGKAIGVDLL--RNPDLVTSDNTVEFKTALWFWMTPQSPKPSSHDVITGRWSPSSTDKAAGRVPGYGVLTNIIDGGVECGKGQESHVADRIGYYK-----------DNLDCYNQKPF 199          
BLAST of CX043382 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSJ (Chitinase 7 OS=Oryza sativa subsp. japonica GN=Cht7 PE=2 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 6.781e-44
Identity = 89/201 (44.28%), Postives = 125/201 (62.19%), Query Frame = -2
Query:  168 RKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPN--YPCR-GK-YYGRGPIQLSWNYNYLRCXXXXXXXXXXLNNPDLLATDPVLSFKSAIWFWMTAQPP-KPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQRPYGLNLMAQS 755
            RKRE+AAF AQT H T+GG        Y+WGYC+       SD+C PN  +PC  GK Y+ RGP+Q+++NYNY               NP+L+ATDP ++FK+A+W WMTA+ P +PS H V+  +W P+  D  AGR PGYGLTTNI+ GG++C  G   A  +R+ F+  +C   G+  G +LDC+ Q P+  ++M+ S
Sbjct:  148 RKREVAAFLAQTSHATSGG-------PYSWGYCYKEVKGATSDFCVPNARWPCAPGKAYHARGPMQIAYNYNYGAAGEAIGADLL--GNPELVATDPTVAFKTALWLWMTARSPSQPSPHAVVTGQWTPTPADSAAGRAPGYGLTTNILTGGLQCAGGNGGA--DRVAFYKRYCDVLGVGYGPNLDCFGQAPFDGDIMSAS 337          
BLAST of CX043382 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSI (Chitinase 7 OS=Oryza sativa subsp. indica GN=Cht7 PE=2 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 8.856e-44
Identity = 89/201 (44.28%), Postives = 124/201 (61.69%), Query Frame = -2
Query:  168 RKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPN--YPCR-GK-YYGRGPIQLSWNYNYLRCXXXXXXXXXXLNNPDLLATDPVLSFKSAIWFWMTAQPP-KPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDCYNQRPYGLNLMAQS 755
            RKRE+AAF AQT H T+GG        Y+WGYC+       SD+C PN  +PC  GK Y+ RGP+Q+++NYNY               NP+L+ATDP ++FK+A+W WMTA+ P +PS H V+  +W P+  D  AGR PGYGLTTNI+ GG++C  G   A  +R+ F+  +C   G+  G +LDC+ Q P+   +M+ S
Sbjct:  148 RKREVAAFLAQTSHATSGG-------PYSWGYCYKEVKGATSDFCVPNARWPCAPGKAYHARGPMQIAYNYNYGAAGEAIGADLL--GNPELVATDPTVAFKTALWLWMTARSPSQPSPHAVVTGQWTPTPADSAAGRAPGYGLTTNILTGGLQCAGGNGGA--DRVAFYKRYCDVLGVGYGPNLDCFGQAPFDGGIMSAS 337          
BLAST of CX043382 vs. ExPASy Swiss-Prot
Match: CHI5_ORYSJ (Chitinase 5 OS=Oryza sativa subsp. japonica GN=Cht5 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.518e-27
Identity = 72/187 (38.50%), Postives = 96/187 (51.34%), Query Frame = -2
Query:  210 KREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPS-DYCDPN---YPCRG--KYYGRGPIQLSWNYNYLRCXXXXXXXXXXLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDC 752
            KREIAAFFA   HET                C+I+E++  S DYCD N   +PC+   KYYGRGP+Q+SWNYNY             L +PD +A DP +SFK+A+WFWM                     N+V+   L G+G T   ING +EC      AV  R+ ++  +C +FG+ PG +L C
Sbjct:  138 KREIAAFFAHVTHETGH-------------MCYINEINGASMDYCDKNNKQWPCQPGKKYYGRGPLQISWNYNY--GPAGQNIGFDGLRDPDRVAQDPTISFKTALWFWM---------------------NNVHQVMLQGFGATIRAINGALECNGKNPGAVNARVNYYKDYCRQFGVDPGGNLYC 288          
BLAST of CX043382 vs. ExPASy Swiss-Prot
Match: CHIP_BETVU (Acidic endochitinase SP2 OS=Beta vulgaris GN=SP2 PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.088e-25
Identity = 73/189 (38.62%), Postives = 89/189 (47.09%), Query Frame = -2
Query:  210 KREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPP--SDYCDPN----YPCRG--KYYGRGPIQLSWNYNYLRCXXXXXXXXXXLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDC 752
            KREIAAFFA   HETT               C I E        YCD +    YPC    KYYGRGP+QLSWNYNY             L NP+ +ATD   SFK+A+WFWMT                     +V++    G+G TT  ING +EC         +RI F+  +C  FG+ PGD+L C
Sbjct:  136 KREIAAFFAHISHETTN-------------LCHIEERDGDVGDAYCDQDKAAQYPCAAGKKYYGRGPLQLSWNYNY--ALAGQAIGFDGLGNPEKVATDVNTSFKAAMWFWMT---------------------NVHSVMNQGFGATTKAINGALECNGQNQDQANDRIQFYKKYCADFGVAPGDNLTC 288          
BLAST of CX043382 vs. ExPASy Swiss-Prot
Match: CHIB_MAIZE (Endochitinase B (Fragment) OS=Zea mays PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.088e-25
Identity = 67/191 (35.08%), Postives = 95/191 (49.74%), Query Frame = -2
Query:  210 NETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPN---YPCRG--KYYGRGPIQLSWNYNYLRCXXXXXXXXXXLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDC 767
            ++   KREIAAFFA   HET               +C+ISE++  + YCDP    +PC    KYYGRGP+Q+SWNYNY             L +P  +A D V++FK+A+WFWM       S H V+                 G+G TT  +   +ECG    A +  R+G++  +C + G+ PG +L C
Sbjct:  115 SQVQGKREIAAFFAHATHETGH-------------FCYISEINKSNAYCDPTKRQWPCAAGQKYYGRGPLQISWNYNY--GPAGRAIGFDGLGDPGRVARDAVVAFKAALWFWMN------SVHGVVPQ---------------GFGATTRAMQRALECGGNNPAQMNARVGYYRQYCRQLGVDPGPNLTC 269          
BLAST of CX043382 vs. ExPASy Swiss-Prot
Match: CHIT_DIOJA (Acidic endochitinase OS=Dioscorea japonica PE=1 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 1.420e-25
Identity = 66/182 (36.26%), Postives = 96/182 (52.75%), Query Frame = -2
Query:  210 RKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPNYPCRGKYYGRGPIQLSWNYNYLRCXXXXXXXXXXLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDC 755
            RKREIAA+FA   HET           +A  YC  S+  P    C+PN     +Y+GRGP+QLSWNYNY+             N+PD++  DP++SFK+++WFW+     +     VI+D  +            G+G T  IINGG EC     A +  R+G++  +C + G+ PG++L C
Sbjct:   96 RKREIAAYFAHVTHETGHLCYIEERDGHANNYCQESQQYP----CNPNK----EYFGRGPMQLSWNYNYIDAGKELHFDGL--NDPDIVGRDPIISFKTSLWFWI-----RKGVQYVILDPNQ------------GFGATIRIINGGQECDGHNTAQMMARVGYYQEYCAQLGVSPGNNLPC 250          
BLAST of CX043382 vs. ExPASy Swiss-Prot
Match: CHI4_ORYSJ (Chitinase 4 OS=Oryza sativa subsp. japonica GN=Cht4 PE=2 SV=2)

HSP 1 Score: 116.316 bits (290), Expect = 1.855e-25
Identity = 68/187 (36.36%), Postives = 95/187 (50.80%), Query Frame = -2
Query:  210 KREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPS-DYCDPN---YPCRG--KYYGRGPIQLSWNYNYLRCXXXXXXXXXXLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGQGGNAAVRNRIGFFTTFCGKFGIQPGDSLDC 752
            KREIAAFFA   HET                C+I+E++  + DYCD +   +PC+   KYYGRGP+Q+SWN+NY             L +PD +A DP +SFK+A+WFWM                     N+V+     G+G T   ING +EC      AV  R+ ++  +C +FG+ PG +L C
Sbjct:  135 KREIAAFFAHVTHETGH-------------MCYINEINGANMDYCDKSNKQWPCQPGKKYYGRGPLQISWNFNY--GPAGKNIGFDGLRDPDKVAQDPTISFKTALWFWM---------------------NNVHQVMSQGFGATIRAINGALECNGKNPGAVNARVNYYKDYCRQFGVSPGGNLYC 285          
The following BLAST results are available for this feature:
BLAST of CX043382 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
CHIB_POPTR1.842e-4948.99Acidic endochitinase WIN6.2B OS=Populus trichocarp... [more]
CHI8_ORYSJ1.194e-4851.83Chitinase 8 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHIT_AVESA3.596e-4548.15Endochitinase (Fragments) OS=Avena sativa PE=1 SV=... [more]
CHI7_ORYSJ6.781e-4444.28Chitinase 7 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHI7_ORYSI8.856e-4444.28Chitinase 7 OS=Oryza sativa subsp. indica GN=Cht7 ... [more]
CHI5_ORYSJ1.518e-2738.50Chitinase 5 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHIP_BETVU1.088e-2538.62Acidic endochitinase SP2 OS=Beta vulgaris GN=SP2 P... [more]
CHIB_MAIZE1.088e-2535.08Endochitinase B (Fragment) OS=Zea mays PE=1 SV=1[more]
CHIT_DIOJA1.420e-2536.26Acidic endochitinase OS=Dioscorea japonica PE=1 SV... [more]
CHI4_ORYSJ1.855e-2536.36Chitinase 4 OS=Oryza sativa subsp. japonica GN=Cht... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_10F10_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-10F10-L20-1-6.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043382 ID=CX043382; Name=CX043382; organism=Citrus sinensis; type=EST; length=768bp
TGAAGACTCATTGATCCATGTTGGATCAGTCTTATTTAATTTACTTACAA
TAAGAGCGTAACAAACTAACAATTTAGTTGTCCACCTACAAGTGTGACAT
CTAAAGTTTTTATTAAGTAGCTTTTATTAAGCTTATTTTACTAAAACGTT
GATCATGATGATCACATAGATTGTGCCATCAGATTAAGGCCATAAGGTCG
TTGGTTGTAGCAATCAAGACTGTCACCAGGCTGAATCCCAAACTTGCCAC
AGAAAGTGGTAAAGAACCCAATACGGTTACGTACAGCGGCATTCCCACCT
TGGCCACATTCAATTCCACCGTTGATTATATTTGTGGTTAGACCGTATCC
CGGAAGCCGGCCGGCGTTTACGTCATTTGCTGATGGTTTCCATTCGTCGA
TAATGACTTCGTGGCACGATGGCTTTGGTGGCTGTGCAGTCATCCAGAAC
CAGATTGCTGACTTGAATGATAGTACTGGATCAGTAGCAAGAAGGTCTGG
ATTGTTCAACAACTCCTCTCCTAGCCCTAGGCCTTCTCCGCACCGTAAGT
AATTGTAATTCCAAGAGAGTTGAATTGGACCTCGGCCATAGTACTTCCCT
CGACATGGATAGTTAGGATCACAGTAGTCGGACGGAGGGCTAACTTCGCT
TATAAAGCAATATCCCCAAGCATATTCGCCACCAGGTGCATCGGGCCATC
CCCCAGTAGTTTCATGGCCAGTTTGGGCAAAAAAGGCAGCGATTTCTCTT
TTACGCATGGTTTCATTT
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