EG358216

Overview
NameEG358216
Unique NameEG358216
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length425
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EG358216 vs. ExPASy Swiss-Prot
Match: OLPA_TOBAC (Osmotin-like protein OS=Nicotiana tabacum GN=OLPA PE=1 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 6.860e-28
Identity = 51/80 (63.75%), Postives = 62/80 (77.50%), Query Frame = 1
Query:    1 TADIVGQCPNELRVPGGCNGPCPVFKTEEHCCNSGKCGPTKFSRFFKERCPDAYSYPKDDATSVFTCPG-GTNYKVVFCP 237
            TA+I G+CP  LRVPGGCN PC  F  +++CC  G CGPT+ SR+FK+RCPDAYSYP+DD TS FTC    T+YKV+FCP
Sbjct:  148 TANINGECPGSLRVPGGCNNPCTTFGGQQYCCTQGPCGPTELSRWFKQRCPDAYSYPQDDPTSTFTCTSWTTDYKVMFCP 227          
BLAST of EG358216 vs. ExPASy Swiss-Prot
Match: OS35_SOLCO (Osmotin-like protein OSML15 OS=Solanum commersonii PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.170e-27
Identity = 51/79 (64.56%), Postives = 60/79 (75.95%), Query Frame = 1
Query:    4 ADIVGQCPNELRVPGGCNGPCPVFKTEEHCCNSGKCGPTKFSRFFKERCPDAYSYPKDDATSVFTCPG-GTNYKVVFCP 237
            A+I G+CP  LRVPGGCN PC  F  +++CC  G CGPT  SRFFK+RCPDAYSYP+DD TS FTC    T+YKV+FCP
Sbjct:  149 ANINGECPGSLRVPGGCNNPCTTFGGQQYCCTQGPCGPTDLSRFFKQRCPDAYSYPQDDPTSTFTCQSWTTDYKVMFCP 227          
BLAST of EG358216 vs. ExPASy Swiss-Prot
Match: IAAT_MAIZE (Alpha-amylase/trypsin inhibitor OS=Zea mays PE=1 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.996e-27
Identity = 52/80 (65.00%), Postives = 60/80 (75.00%), Query Frame = 1
Query:    7 DIVGQCPNELRVPGGCNGPCPVFKTEEHCC---NSGKCGPTKFSRFFKERCPDAYSYPKDDATSVFTCPGGTNYKVVFCP 237
            D+  +CP ELR  G CN  CPVFK +E+CC    +  C PT +SR+FK +CPDAYSYPKDDATS FTCP GTNYKVVFCP
Sbjct:  127 DVNARCPAELRQDGVCNNACPVFKKDEYCCVGSAANNCHPTNYSRYFKGQCPDAYSYPKDDATSTFTCPAGTNYKVVFCP 206          
BLAST of EG358216 vs. ExPASy Swiss-Prot
Match: ZEAM_MAIZE (Zeamatin OS=Zea mays GN=Zlp PE=1 SV=2)

HSP 1 Score: 120.553 bits (301), Expect = 2.607e-27
Identity = 52/80 (65.00%), Postives = 60/80 (75.00%), Query Frame = 1
Query:    7 DIVGQCPNELRVPGGCNGPCPVFKTEEHCC---NSGKCGPTKFSRFFKERCPDAYSYPKDDATSVFTCPGGTNYKVVFCP 237
            D+  +CP ELR  G CN  CPVFK +E+CC    +  C PT +SR+FK +CPDAYSYPKDDATS FTCP GTNYKVVFCP
Sbjct:  148 DVNARCPAELRQDGVCNNACPVFKKDEYCCVGSAANDCHPTNYSRYFKGQCPDAYSYPKDDATSTFTCPAGTNYKVVFCP 227          
BLAST of EG358216 vs. ExPASy Swiss-Prot
Match: THM2_THADA (Thaumatin-2 OS=Thaumatococcus daniellii PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 2.207e-26
Identity = 51/79 (64.56%), Postives = 62/79 (78.48%), Query Frame = 1
Query:    4 ADIVGQCPNELRVPGG-CNGPCPVFKTEEHCCNSGKCGPTKFSRFFKERCPDAYSYPKDDATSVFTCPGGTNYKVVFCP 237
            ADIVGQCP +L+ PGG CN  C VF+T E+CC +GKCGPT++SRFFK  CPDA+SY  D  T+V TCPG +NY+V FCP
Sbjct:  150 ADIVGQCPAKLKAPGGGCNDACTVFQTSEYCCTTGKCGPTEYSRFFKRLCPDAFSYVLDKPTTV-TCPGSSNYRVTFCP 227          
BLAST of EG358216 vs. ExPASy Swiss-Prot
Match: THM1_THADA (Thaumatin-1 OS=Thaumatococcus daniellii PE=1 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 2.207e-26
Identity = 51/79 (64.56%), Postives = 62/79 (78.48%), Query Frame = 1
Query:    4 ADIVGQCPNELRVPGG-CNGPCPVFKTEEHCCNSGKCGPTKFSRFFKERCPDAYSYPKDDATSVFTCPGGTNYKVVFCP 237
            ADIVGQCP +L+ PGG CN  C VF+T E+CC +GKCGPT++SRFFK  CPDA+SY  D  T+V TCPG +NY+V FCP
Sbjct:  128 ADIVGQCPAKLKAPGGGCNDACTVFQTSEYCCTTGKCGPTEYSRFFKRLCPDAFSYVLDKPTTV-TCPGSSNYRVTFCP 205          
BLAST of EG358216 vs. ExPASy Swiss-Prot
Match: PRR3_JUNAS (Pathogenesis-related protein OS=Juniperus ashei PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 6.219e-21
Identity = 43/81 (53.09%), Postives = 55/81 (67.90%), Query Frame = 1
Query:    4 ADIVGQCPNELRVPGGCNGPCPVFKTEEHCCNSG---KCGPTKFSRFFKERCPDAYSYPKDDATSVFTCPGGTNYKVVFCP 237
            ADI   CP+EL+V GGCN  C VFKT+++CC +     C  T +S+ FK +CP AYSY KDD T+ F C  GT+Y +VFCP
Sbjct:  146 ADINAVCPSELKVDGGCNSACNVFKTDQYCCRNAYVDNCPATNYSKIFKNQCPQAYSYAKDD-TATFACASGTDYSIVFCP 225          
BLAST of EG358216 vs. ExPASy Swiss-Prot
Match: TLP1_CASSA (Thaumatin-like protein 1 OS=Castanea sativa GN=TL1 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 2.289e-15
Identity = 37/89 (41.57%), Postives = 48/89 (53.93%), Query Frame = 1
Query:    4 ADIVGQCPNELRVPGG------CNGPCPVFKTEEHCCNSG-----KCGPTKFSRFFKERCPDAYSYPKDDATSVFTCPGGTNYKVVFCP 237
            A++   CP EL+V G       C   C  F   ++CC         C  TK+SR FK++CP AYSY  DD+TS FTC G  +Y + FCP
Sbjct:  155 ANVNAVCPAELQVKGSDASVLACKSACTAFNQPQYCCTGAFDTARTCPATKYSRIFKQQCPQAYSYAYDDSTSTFTCSGAPDYVITFCP 243          
BLAST of EG358216 vs. ExPASy Swiss-Prot
Match: PR5_ARATH (Pathogenesis-related protein 5 OS=Arabidopsis thaliana GN=At1g75040 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.904e-15
Identity = 38/88 (43.18%), Postives = 48/88 (54.55%), Query Frame = 1
Query:    4 ADIVGQCPNELRVPG-----GCNGPCPVFKTEEHCCNSGK-----CGPTKFSRFFKERCPDAYSYPKDDATSVFTCPGGTNYKVVFCP 237
            +D+   CP+ L+V        C   C  F T+++CC         C PT +SR FK  CPDAYSY  DD TS FTC  G NY++ FCP
Sbjct:  153 SDLNAACPDMLKVMDQNNVVACKSACERFNTDQYCCRGANDKPETCPPTDYSRIFKNACPDAYSYAYDDETSTFTCT-GANYEITFCP 239          
BLAST of EG358216 vs. ExPASy Swiss-Prot
Match: TLP1_PYRPY (Thaumatin-like protein 1 OS=Pyrus pyrifolia GN=TL1 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.938e-14
Identity = 38/89 (42.70%), Postives = 46/89 (51.69%), Query Frame = 1
Query:    4 ADIVGQCPNELRVPG------GCNGPCPVFKTEEHCCNSG-----KCGPTKFSRFFKERCPDAYSYPKDDATSVFTCPGGTNYKVVFCP 237
            A+I   CP EL   G      GC   C      ++CC         C PT FS+ FK +CP AYSY  DD +S FTC GG NY++ FCP
Sbjct:  156 ANINTVCPAELSDKGSDGSVIGCKSACLALNQPQYCCTGAYGTPDTCPPTDFSKVFKNQCPQAYSYAYDDKSSTFTCFGGPNYEITFCP 244          
The following BLAST results are available for this feature:
BLAST of EG358216 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 26
Match NameE-valueIdentityDescription
OLPA_TOBAC6.860e-2863.75Osmotin-like protein OS=Nicotiana tabacum GN=OLPA ... [more]
OS35_SOLCO1.170e-2764.56Osmotin-like protein OSML15 OS=Solanum commersonii... [more]
IAAT_MAIZE1.996e-2765.00Alpha-amylase/trypsin inhibitor OS=Zea mays PE=1 S... [more]
ZEAM_MAIZE2.607e-2765.00Zeamatin OS=Zea mays GN=Zlp PE=1 SV=2[more]
THM2_THADA2.207e-2664.56Thaumatin-2 OS=Thaumatococcus daniellii PE=2 SV=1[more]
THM1_THADA2.207e-2664.56Thaumatin-1 OS=Thaumatococcus daniellii PE=1 SV=1[more]
PRR3_JUNAS6.219e-2153.09Pathogenesis-related protein OS=Juniperus ashei PE... [more]
TLP1_CASSA2.289e-1541.57Thaumatin-like protein 1 OS=Castanea sativa GN=TL1... [more]
PR5_ARATH3.904e-1543.18Pathogenesis-related protein 5 OS=Arabidopsis thal... [more]
TLP1_PYRPY1.938e-1442.70Thaumatin-like protein 1 OS=Pyrus pyrifolia GN=TL1... [more]

Pages

back to top
Properties
Property NameValue
Genbank description1e6 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0001e6, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358216 ID=EG358216; Name=EG358216; organism=Citrus sinensis; type=EST; length=425bp
ACGGCTGATATTGTCGGGCAGTGCCCGAATGAATTGAGGGTTCCCGGAGG
ATGTAATGGGCCATGTCCCGTGTTCAAGACCGAAGAGCACTGTTGCAATT
CAGGCAAATGTGGACCTACAAAATTCTCCAGGTTTTTCAAGGAAAGGTGC
CCGGATGCTTATAGTTACCCTAAAGATGATGCAACAAGCGTCTTCACTTG
TCCTGGTGGGACTAATTATAAGGTTGTGTTCTGCCCGTGAAGATTGAATC
AGCTGCCTATCATTTGTTGGTTGGAATTATCTGCTATACGTTGTAAGGTC
GCTGCAATATATGTGTAAGGAATAAGGCTTTAATTTGCCTTTGTGGCTTC
AAGCCGTGTCACATTAATAAATCTTCTAAAGTAGAGTTTATATAAAGAAA
AAAAAAAAAAAAAAAAAAAAAAAAG
back to top