CN186095
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186095 vs. ExPASy Swiss-Prot
Match: PSA2B_ARATH (Proteasome subunit alpha type-2-B OS=Arabidopsis thaliana GN=PAB2 PE=1 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 5.732e-17 Identity = 52/157 (33.12%), Postives = 86/157 (54.78%), Query Frame = -3 Query: 321 DARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAI 791 D R LV+++R +A ++ Y +PV L + A Q +TQ +RP GV +V D++ GP+L++ DP+G +F KA++ G A FLEK+ D + + TAI TL+ + + + IE+G + + FRVL+ EID++L + Sbjct: 82 DFRVLVRKSRKQAEQYLRLYKEPIPVTQLVRETATVMQEFTQSGGVRPFGVSLLVAGYDDK-GPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTED--MELDDAIHTAILTLKEGFEGEISSKNIEIGKIGTDK-VFRVLTPAEIDDYLAEV 234
BLAST of CN186095 vs. ExPASy Swiss-Prot
Match: PSA2A_ARATH (Proteasome subunit alpha type-2-A OS=Arabidopsis thaliana GN=PAB1 PE=1 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 5.732e-17 Identity = 52/157 (33.12%), Postives = 86/157 (54.78%), Query Frame = -3 Query: 321 DARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAI 791 D R LV+++R +A ++ Y +PV L + A Q +TQ +RP GV +V D++ GP+L++ DP+G +F KA++ G A FLEK+ D + + TAI TL+ + + + IE+G + + FRVL+ EID++L + Sbjct: 82 DFRVLVRKSRKQAEQYLRLYKEPIPVTQLVRETATVMQEFTQSGGVRPFGVSLLVAGYDDK-GPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTED--MELDDAIHTAILTLKEGFEGEISSKNIEIGKIGADK-VFRVLTPAEIDDYLAEV 234
BLAST of CN186095 vs. ExPASy Swiss-Prot
Match: PSMA_PICTO (Proteasome subunit alpha OS=Picrophilus torridus GN=psmA PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 7.486e-17 Identity = 52/155 (33.55%), Postives = 83/155 (53.55%), Query Frame = -3 Query: 330 ADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHL 794 ADAR L+ AR + + YG M ++ L K +AD+ Q YTQ+ +RP GV + +D GPRLF CDPAG +K S G + + +LEK+ K + + E ++ I+ L+S + ++ E E+ + K F V + EE+ ++L Sbjct: 83 ADARVLIDFARISDQQEKVTYGSLMNIENLVKRVADQMQQYTQYGGVRPYGVSIIFAGLD-SIGPRLFDCDPAGTINEYKCVSIGAGKDQVTAYLEKEYKEN--LSEDEAIRMGIAALKSAVADESSMKEPEIASI-KMGETFHVFTSEEVSKYL 233
BLAST of CN186095 vs. ExPASy Swiss-Prot
Match: PSA7L_MACFA (Proteasome subunit alpha type-7-like OS=Macaca fascicularis GN=PSMA7L PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 7.486e-17 Identity = 54/180 (30.00%), Postives = 91/180 (50.56%), Query Frame = -3 Query: 258 TADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISERD*EVVSRPIINAETKKQK 797 TADAR ++ +AR E + + V+ + ++IA Q YTQ RP G+ A+++ D++ PRL++ DP+G + KA + G + FLEK D + E ++ AI L V+Q K IE+ ++ + P ++ S +E++ ++T I + E AE KK K Sbjct: 79 TADARVVINRARVECQSHKLTVEDPVTVEYITRFIATLKQKYTQSNGRRPFGISALIVGFDDDGIPRLYQTDPSGTYHAWKANAIGRSAKTVREFLEKNYTEDAIASDNEAIKLAIKALLEVVQSGGK--NIELAIIRRNQP-LKMFSAKEVELYVTEIEKEKEE--------AEKKKSK 247
BLAST of CN186095 vs. ExPASy Swiss-Prot
Match: PSA2_ORYSJ (Proteasome subunit alpha type-2 OS=Oryza sativa subsp. japonica GN=PAB1 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 7.486e-17 Identity = 52/157 (33.12%), Postives = 86/157 (54.78%), Query Frame = -3 Query: 321 DARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAI 791 D R LV+++R +A ++ Y +PV L + A Q +TQ +RP GV ++ D+ GP+L++ DP+G +F KA++ G A FLEK+ D + + TAI TL+ + A+ IE+G++ + + EF+VLS EI + L + Sbjct: 82 DFRVLVRKSRKQAQQYYRLYKETIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLIAGYDDN-GPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTED--MELDDAIHTAILTLKEGYEGQISANNIEIGII-RSDREFKVLSPAEIKDFLEEV 234
BLAST of CN186095 vs. ExPASy Swiss-Prot
Match: PSA2_ORYSI (Proteasome subunit alpha type-2 OS=Oryza sativa subsp. indica GN=PAB1 PE=2 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 7.486e-17 Identity = 52/157 (33.12%), Postives = 86/157 (54.78%), Query Frame = -3 Query: 321 DARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAI 791 D R LV+++R +A ++ Y +PV L + A Q +TQ +RP GV ++ D+ GP+L++ DP+G +F KA++ G A FLEK+ D + + TAI TL+ + A+ IE+G++ + + EF+VLS EI + L + Sbjct: 82 DFRVLVRKSRKQAQQYYRLYKETIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLIAGYDDN-GPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTED--MELDDAIHTAILTLKEGYEGQISANNIEIGII-RSDREFKVLSPAEIKDFLEEV 234
BLAST of CN186095 vs. ExPASy Swiss-Prot
Match: PSMA_THEGJ (Proteasome subunit alpha OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=psmA PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 9.777e-17 Identity = 53/160 (33.12%), Postives = 85/160 (53.12%), Query Frame = -3 Query: 315 ADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISE 794 ADAR LV +AR EA +R YG +P+ VL K I D Q +TQ+ +RP G ++ ++E+ P L++ DP+G +F KA + G A+ E+ +D + ++ AI L L+E S IEV ++ + ++ L EE+ ++L I E Sbjct: 85 ADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQAHTQYGGVRPFGAALLMAGVNEK--PELYETDPSGAYFEWKAVAIGSGRNTAMAIFEEHYSDD--IDMEGAIKLAILALAKTLEEPSPES-IEVAYITLDEKRWKKLDKEEVAKYLNEILE 239
BLAST of CN186095 vs. ExPASy Swiss-Prot
Match: PSMA_SULTO (Proteasome subunit alpha OS=Sulfolobus tokodaii GN=psmA PE=3 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 1.668e-16 Identity = 51/152 (33.55%), Postives = 76/152 (50.00%), Query Frame = -3 Query: 345 ADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQ--EDFKASEIEVGVVSKENPEFRVLSIEE 794 +D R L+ AR +A + R Y + +D L K ++D Q+YTQH +RP GV ++ ID P+L +P+G F + A + G A + EK + D Q+T+ I L S L+ E S IEVG ++ FR +S EE Sbjct: 85 SDGRILIDYARSQALQHRLIYDEPINIDYLTKLVSDVKQMYTQHGGVRPFGVALIIGGIDRGKTPKLLMTEPSGQFMPYYAVAIGQGGYTATEYFEKNYRED--LNMQDTILLGIRALASTLKPGEKLAPSNIEVGFADVDSGMFRKMSFEE 234
BLAST of CN186095 vs. ExPASy Swiss-Prot
Match: PSA7_BOVIN (Proteasome subunit alpha type-7 OS=Bos taurus GN=PSMA7 PE=1 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.668e-16 Identity = 56/180 (31.11%), Postives = 92/180 (51.11%), Query Frame = -3 Query: 258 TADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISERD*EVVSRPIINAETKKQK 797 TADAR ++ +AR E R + V+ + ++IA Q YTQ RP G+ A+++ D + PRL++ DP+G + KA + G + FLEK ++ T T++ I L V+Q K IE+ V+ ++ P ++L+ EEI++++ I + E E KKQK Sbjct: 77 TADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDEAIETDDLTIKLVIKALLEVVQSGGK--NIELAVMRRDQP-LKILNPEEIEKYVAEIEKEKEE--------NEKKKQK 245
BLAST of CN186095 vs. ExPASy Swiss-Prot
Match: PSA2_CAEEL (Proteasome subunit alpha type-2 OS=Caenorhabditis elegans GN=pas-2 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.668e-16 Identity = 54/155 (34.84%), Postives = 79/155 (50.97%), Query Frame = -3 Query: 330 DARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECG-PRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHL 791 D R LV++AR A E+ YG EMP L IA Q YTQ +RP G ++ D+ G P LF+CDP+G +F KAT+ G + A FLEK+ A + + TA+ TL+ + +EV V + F L+ +++ +HL Sbjct: 78 DFRILVKKARKIAMEYEMMYGEEMPTIQLVTDIAAVMQEYTQSGGVRPFGASLLIAGWDKNPGRPLLFQCDPSGAYFAWKATALGKNDVNAKTFLEKRFSE--ALELDDGIHTALLTLRESFDVGMNENNVEVAVCNSTG--FHRLTKQQVHDHL 228 The following BLAST results are available for this feature:
BLAST of CN186095 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 146
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186095 ID=CN186095; Name=CN186095; organism=Citrus sinensis; type=EST; length=799bpback to top |