CN186091

Overview
NameCN186091
Unique NameCN186091
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length714
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN186091 vs. ExPASy Swiss-Prot
Match: GUN20_ARATH (Endoglucanase 20 OS=Arabidopsis thaliana GN=At4g23560 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.269e-11
Identity = 33/66 (50.00%), Postives = 45/66 (68.18%), Query Frame = 3
Query:  516 YTLALHKALMFFNAQRSGKLPKHNNVSWRGNSCLKDGKSASSSISKDLVGGFYDAGDAIKFNFPQS 713
            Y  AL+K+++FF  QRSGKLP +  V WR +S L DG  A    + +L+GG+YDAGD +KF +P S
Sbjct:   24 YGDALNKSILFFEGQRSGKLPTNQRVKWRADSALSDGSLA----NVNLIGGYYDAGDNVKFVWPMS 85          
BLAST of CN186091 vs. ExPASy Swiss-Prot
Match: GUN13_ORYSJ (Endoglucanase 13 OS=Oryza sativa subsp. japonica GN=GLU6 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.269e-11
Identity = 35/67 (52.24%), Postives = 42/67 (62.69%), Query Frame = 3
Query:  513 NYTLALHKALMFFNAQRSGKLPKHNNVSWRGNSCLKDGKSASSSISKDLVGGFYDAGDAIKFNFPQS 713
            +Y  A  K L+FF AQRSGKLP    V WRG+S L DG S       DLVGG+YD+GD +KF  P +
Sbjct:   38 DYAGAFDKCLLFFEAQRSGKLPDDRLVRWRGDSALTDGFSQ----GVDLVGGYYDSGDHVKFGLPMA 100          
BLAST of CN186091 vs. ExPASy Swiss-Prot
Match: GUN13_ORYSI (Endoglucanase 13 OS=Oryza sativa subsp. indica GN=GLU6 PE=3 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 2.269e-11
Identity = 35/67 (52.24%), Postives = 42/67 (62.69%), Query Frame = 3
Query:  513 NYTLALHKALMFFNAQRSGKLPKHNNVSWRGNSCLKDGKSASSSISKDLVGGFYDAGDAIKFNFPQS 713
            +Y  A  K L+FF AQRSGKLP    V WRG+S L DG S       DLVGG+YD+GD +KF  P +
Sbjct:   38 DYAGAFDKCLLFFEAQRSGKLPDDRLVRWRGDSALTDGFSQ----GVDLVGGYYDSGDHVKFGLPMA 100          
BLAST of CN186091 vs. ExPASy Swiss-Prot
Match: GUN24_ARATH (Endoglucanase 24 OS=Arabidopsis thaliana GN=At4g39010 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.963e-11
Identity = 33/67 (49.25%), Postives = 45/67 (67.16%), Query Frame = 3
Query:  513 NYTLALHKALMFFNAQRSGKLPKHNNVSWRGNSCLKDGKSASSSISKDLVGGFYDAGDAIKFNFPQS 713
            +Y+ AL K+++FF  QRSG LP    ++WR NS L DG + +     DL GG+YDAGD +KFNFP +
Sbjct:   29 DYSDALSKSILFFEGQRSGYLPNDQRMTWRRNSGLSDGWTHNI----DLTGGYYDAGDNVKFNFPMA 91          
BLAST of CN186091 vs. ExPASy Swiss-Prot
Match: GUN20_ORYSJ (Endoglucanase 20 OS=Oryza sativa subsp. japonica GN=GLU15 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.870e-11
Identity = 31/67 (46.27%), Postives = 45/67 (67.16%), Query Frame = 3
Query:  513 NYTLALHKALMFFNAQRSGKLPKHNNVSWRGNSCLKDGKSASSSISKDLVGGFYDAGDAIKFNFPQS 713
            +Y  AL KA++FF  QRSG+LP +   +WRG+S L DG+      + +L GG+YDAGD +KF +P +
Sbjct:   40 DYGDALAKAILFFEGQRSGRLPANQRATWRGDSALTDGREE----NVNLTGGYYDAGDNVKFGYPMA 102          
The following BLAST results are available for this feature:
BLAST of CN186091 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
GUN20_ARATH2.269e-1150.00Endoglucanase 20 OS=Arabidopsis thaliana GN=At4g23... [more]
GUN13_ORYSJ2.269e-1152.24Endoglucanase 13 OS=Oryza sativa subsp. japonica G... [more]
GUN13_ORYSI2.269e-1152.24Endoglucanase 13 OS=Oryza sativa subsp. indica GN=... [more]
GUN24_ARATH2.963e-1149.25Endoglucanase 24 OS=Arabidopsis thaliana GN=At4g39... [more]
GUN20_ORYSJ3.870e-1146.27Endoglucanase 20 OS=Oryza sativa subsp. japonica G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002F15_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002F15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186091 ID=CN186091; Name=CN186091; organism=Citrus sinensis; type=EST; length=714bp
AGGATTTGACAGCCAGATCAGAGCACCACCGTCACCACCAAATCACACCA
CACAACTCTACAAAACCAGACCGGAGCATTCACAGTACAAACTTTCCATC
TTAATTCTTGAGAGAGAAAGAGATCTAACATATCTTTAGCTGAGGGGAGA
GTGAGTGAGTGTGAGATTTGATTTGGTAACAAACAATGAGTATGTTTGGA
AGAGATCCGTGGGGTGGCCCACTGGAGATCAACGCGGCGGACTCAGCCAC
TGACGACGATCGGAGCAGGAACCTTCAGGATTTCGACAGGGCAGCTCTGT
CTCGGCCCTTGGATGAGACCCAGCAGAGCTGGCTTCTGGGTCCCACCGAA
AAGAAGAAGAAGAAGTGCGTAGATCTGGGTTGCATCATCGTCAGCCGGAA
GATCTTCGTCTGGACTGTCGGCACTCTTCTCGTCTCCGCACTCTTAGCCG
GCTTCATCACTCTTATTGTCAAAACGGTGCCGCGTCATCACCACTCTCAT
GCTCGCCCTGATAATTACACTCTCGCTTTGCACAAGGCCCTCATGTTCTT
CAATGCCCAACGATCTGGCAAATTACCCAAGCATAATAACGTTTCTTGGA
GGGGAAATTCTTGTCTGAAGGATGGCAAATCGGCTTCCTCTAGTATTTCC
AAGGATCTGGTTGGGGGTTTTTACGATGCTGGGGATGCCATTAAGTTTAA
TTTTCCTCAATCTT
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