DC900160

Overview
NameDC900160
Unique NameDC900160
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length718
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC900160 vs. ExPASy Swiss-Prot
Match: SCP28_ARATH (Serine carboxypeptidase-like 28 OS=Arabidopsis thaliana GN=SCPL28 PE=2 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 4.311e-25
Identity = 49/163 (30.06%), Postives = 82/163 (50.31%), Query Frame = 1
Query:    1 LISDSTYDIFTRVCNYSQIRRQYASGSLTAVCSQVISQVSREISRFVDTYDVTLDVCLPSVLLQSKMLSQLQDKEEIDVCVEDETTKYLNRKDVQKALHAQLIGVTSWTVCSEVLKYDMQNLEIPTIHVLGKLAKSGIRVLVYSGDQDSVLPLTGTRTLVNGL 489
            LISD +Y+  T+ C    I   +   +  A  +Q +S+        +D Y++    C       S    Q       D CV   T KY+N  +V K+ HA+L G T WT CS V++ + ++     + ++  L ++ +R+ ++SGD D+VLPL+GTR  +N +
Sbjct:  241 LISDESYNDLTKWCLNDSIL--FPKLNCNAALNQALSEFGD-----IDPYNINSPACTTHA--SSNEWMQAWRYRGNDECVVGYTRKYMNDPNVHKSFHARLNGSTPWTPCSRVIRKNWKDSPKSMLPIIKNLLQAHLRIWIFSGDSDAVLPLSGTRHSINAM 394          

HSP 2 Score: 53.5286 bits (127), Expect = 4.311e-25
Identity = 25/47 (53.19%), Postives = 32/47 (68.09%), Query Frame = 2
Query:  557 GWTQVYGD-ILSFATIRGASHEAPLSQPRRSLALFNAFLGGKXLPGA 694
            GW+QVY D +L++ T+R A HE PLSQPR +L LF  FL    LP +
Sbjct:  414 GWSQVYEDGLLTYTTVRAAGHEVPLSQPRLALFLFTHFLANHSLPSS 460          
BLAST of DC900160 vs. ExPASy Swiss-Prot
Match: SCP29_ARATH (Serine carboxypeptidase-like 29 OS=Arabidopsis thaliana GN=SCPL29 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 5.608e-25
Identity = 49/168 (29.17%), Postives = 82/168 (48.81%), Query Frame = 1
Query:    4 ISDSTYDIFTRVCNYSQIRRQYASGSLTAVCSQVISQVSREISRFVDTYDVTLDVCLPSVLLQSKMLSQLQD-----KEEIDVCVEDETTKYLNRKDVQKALHAQL-IGVTSWTVCSEVLKYDMQNLEIPTIHVLGKLAKSGIRVLVYSGDQDSVLPLTGTRTLVNGL 489
            ISD TY +    C +            +  C++++    +EI   +D Y V    C+ +   QS ML + +       E+ D C E  TT Y N  +VQKALH    +  + W  CS+V+     +     +++  +L  +G+R+ V+SGD D+V+P+T TR  ++ L
Sbjct:  242 ISDQTYSLLQLQCGFESFIHS------SKQCNKILEIADKEIGN-IDQYSVFTPACVANAS-QSNMLLKKRPMTSRVSEQYDPCTEKHTTVYFNLPEVQKALHVPPGLAPSKWDTCSDVVSEHWNDSPSSVLNIYHELIAAGLRIWVFSGDADAVVPVTSTRYSIDAL 401          

HSP 2 Score: 53.5286 bits (127), Expect = 5.608e-25
Identity = 24/46 (52.17%), Postives = 32/46 (69.57%), Query Frame = 2
Query:  548 QAAGWTQVYGDILSFATIRGASHEAPLSQPRRSLALFNAFLGGKXL 685
            Q  GW+Q Y   L+F T+RGA HE PL +P+++LALF AF+ G  L
Sbjct:  417 QVGGWSQQYAG-LNFVTVRGAGHEVPLHRPKQALALFKAFISGTPL 461          
BLAST of DC900160 vs. ExPASy Swiss-Prot
Match: CBP21_HORVU (Serine carboxypeptidase II-1 (Fragment) OS=Hordeum vulgare GN=CXP;2-1 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 7.343e-25
Identity = 51/166 (30.72%), Postives = 82/166 (49.40%), Query Frame = 1
Query:    1 LISDSTYDIFTRVCNYSQIRRQYASGSLTAVCSQVISQVSREISRFVDTYDVTLDVCLPSVLLQSKMLSQLQD--KEEIDVCVEDETTKYLNRKDVQKALHAQLIGVT-SWTVCSEVLKYDMQNLEIPTIHVLGKLAKSGIRVLVYSGDQDSVLPLTGTRTLVNGL 489
            LISD TY      C +     +      +  C++ I+ V+      +D Y +    C  + L + +++   +       D C E  +TKY N  +VQKA  A + G+  SWT CS+VL    ++     + +  +L  +GIR+ V+SGD DSV+PLT TR  ++ L
Sbjct:   96 LISDDTYQKLQLACEFDSAEHE------SEACNK-INNVAEAEEGLIDAYSIYTPTCKKTSLHRRRLIKGRRPWLPRGYDPCTEQYSTKYYNLPEVQKAFRANVTGIPYSWTACSDVLSDHWKDSPRSMLPIYRELIAAGIRIWVFSGDADSVVPLTATRYSIDAL 254          

HSP 2 Score: 50.0618 bits (118), Expect = 7.343e-25
Identity = 25/53 (47.17%), Postives = 33/53 (62.26%), Query Frame = 2
Query:  530 PG*EGRQAAGWTQVYGDILSFATIRGASHEAPLSQPRRSLALFNAFLGGKXLP 688
            P  +  + AGW QVY   L+  TIRGA HE PL +P+++L LF  FL  K +P
Sbjct:  264 PWYDEEEVAGWCQVYKG-LTLVTIRGAGHEVPLHRPQQALKLFEHFLQDKPMP 315          
BLAST of DC900160 vs. ExPASy Swiss-Prot
Match: CBP2_HORVU (Serine carboxypeptidase 2 OS=Hordeum vulgare GN=CBP2 PE=1 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 2.725e-24
Identity = 56/197 (28.43%), Postives = 86/197 (43.65%), Query Frame = 1
Query:    1 LISDSTYDIFTRVCNYSQIRRQYASGSLTAVCSQVISQVSREISRFVDTYDVTLDVCLPSVLLQSKMLSQLQDKEEI-------DVCVEDETTKYLNRKDVQKALHAQLIGVTS--WTVCSEVLKYDMQNLEIPTIHVLGKLAKSGIRVLVYSGDQDSVLPLTGTRTLVNGLAKEIGLNTTVPYRTWVG--RKTGCW 558
            ++SD TY      C +            +  C       + E    +D Y +   VC  S    S  LS+ + +          D C E  +T Y NR+DVQ ALHA + G  +  WT CS+ +     +     + +  +L  +G+R+ V+SGD D+V+PLT TR  +  L    GL TT  +  W    ++ G W
Sbjct:  241 IVSDDTYRRLKDACLHDSFIHP------SPACDAATDVATAEQGN-IDMYSLYTPVCNISSSSSSSSLSRRRTRGRYPWLTGSYDPCTERYSTAYYNRRDVQTALHANVTGAMNYTWTNCSDTINTHWHDAPRSMLPIYRELIAAGLRIWVFSGDTDAVVPLTATRYSIGAL----GLATTTSWYPWYDDLQEVGGW 426          

HSP 2 Score: 54.299 bits (129), Expect = 2.725e-24
Identity = 24/49 (48.98%), Postives = 34/49 (69.39%), Query Frame = 2
Query:  545 RQAAGWTQVYGDILSFATIRGASHEAPLSQPRRSLALFNAFLGGKXLPG 691
            ++  GW+QVY   L+  ++RGA HE PL +PR++L LF  FL GK +PG
Sbjct:  421 QEVGGWSQVYKG-LTLVSVRGAGHEVPLHRPRQALILFQQFLQGKPMPG 468          
BLAST of DC900160 vs. ExPASy Swiss-Prot
Match: CBP23_HORVU (Serine carboxypeptidase II-3 OS=Hordeum vulgare GN=CXP;2-3 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.321e-23
Identity = 56/185 (30.27%), Postives = 89/185 (48.11%), Query Frame = 1
Query:    1 LISDSTYDIFTRVCNYSQIRRQYASGSLTAVCSQVISQVSREISRFVDTYDVTLDVCLPSVLLQSKMLSQLQDKEEIDVCVEDETTKYLNRKDVQKALHAQLIGVTS-WTVCSEVLKYDMQNLEIPTIHVLGKLAKSGIRVLVYSGDQDSVLPLTGTRTLVNGLAKEIGLNTTVPYRTWVGRKTG 552
            LISD T D  ++ CN++      AS +L    S  + +   +I    D Y++    C    L+   +   +   +  D C +     YLNR DVQKALHA +  +   W+ CS+VL   + + +   + ++ +L K+ IRV VYSGD D  +P+T +R  VN    ++ L     +R W     G
Sbjct:  287 LISDETADGISKNCNFTAYGAGVASNALCDAASDEVGESLADI----DIYNIYAPNCQSEKLVTPPIAPSI---DNFDPCTDYYVEAYLNRPDVQKALHANVTRLDHPWSACSDVLTRWVDSAKT-VLPIIQELMKNSIRVWVYSGDTDGRVPVTSSRLSVN----QLQLPVAAKWRPWFSSTKG 459          

HSP 2 Score: 47.7506 bits (112), Expect = 1.321e-23
Identity = 23/47 (48.94%), Postives = 27/47 (57.45%), Query Frame = 2
Query:  548 QAAGWTQVYGDILSFATIRGASHEAPLSQPRRSLALFNAFLGGKXLP 688
            +  G+   Y   LS  T+RGA HE P  QPRR+L L   FL GK LP
Sbjct:  462 EVGGYIVQYKGDLSLVTVRGAGHEVPSYQPRRALVLVQNFLAGKALP 508          
BLAST of DC900160 vs. ExPASy Swiss-Prot
Match: SCP34_ARATH (Serine carboxypeptidase-like 34 OS=Arabidopsis thaliana GN=SCPL34 PE=2 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 1.839e-22
Identity = 55/214 (25.70%), Postives = 101/214 (47.20%), Query Frame = 1
Query:    1 LISDSTYDIFTRVCNYSQIRRQYASGSLTAVCSQVISQVSREISRFVDTYDVTLDVCLPSV--------------------LLQSKMLSQLQDKEEI----DVCVEDETTKYLNRKDVQKALHAQLIGVT-SWTVCSEVLKY--DMQNLEIPTIHVLGKLAKSGIRVLVYSGDQDSVLPLTGTRTLVNGLAKEIGLNTTVPYRTWVGR-KTGCW 558
            +ISD+ Y+   + C++ Q         +T  C+  + +   ++ + +D Y +    C+P+                     +L+ +++S  +    +    D C  + T KY+NRKDVQ+ALHA +  ++  WT CS+ + +  D     +PT+     L  +G+RV V+SGD D  +P+T TR  +    K++GL     +  W  + + G W
Sbjct:  256 VISDALYEKVNKNCDFKQ-------KLVTKECNDALDEYF-DVYKILDMYSLYAPKCVPTSTNSSTSHSVAGNRPLPAFRSILRPRLISHNEGWRRMAAGYDPCASEYTEKYMNRKDVQEALHANVTNISYPWTHCSDTVSFWSDAPASMLPTLRT---LVSAGLRVWVFSGDTDGRIPVTATRYSL----KKLGLKIVQDWTPWYTKLQVGGW 454          

HSP 2 Score: 49.6766 bits (117), Expect = 1.839e-22
Identity = 24/47 (51.06%), Postives = 29/47 (61.70%), Query Frame = 2
Query:  548 QAAGWTQVYGDILSFATIRGASHEAPLSQPRRSLALFNAFLGGKXLP 688
            Q  GWT  Y D L F T+RGA H+ P  +PR +L L + FLG K LP
Sbjct:  450 QVGGWTVEY-DGLMFVTVRGAGHQVPTFKPREALQLIHHFLGNKKLP 495          
BLAST of DC900160 vs. ExPASy Swiss-Prot
Match: SCP35_ARATH (Serine carboxypeptidase-like 35 OS=Arabidopsis thaliana GN=SCPL35 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 3.114e-22
Identity = 53/161 (32.92%), Postives = 81/161 (50.31%), Query Frame = 1
Query:  139 VDTYDVTLDVCL----------PSVLLQSKMLS--QLQDK--EEIDVCVEDETTKYLNRKDVQKALHAQLIGVT-SWTVCSEVLKY--DMQNLEIPTIHVLGKLAKSGIRVLVYSGDQDSVLPLTGTRTLVNGLAKEIGLNTTVPYRTWVGR-KTGCWMDT 567
            +D Y +   VCL          P +++  ++L+   L DK     D C E     Y NRKDVQ ALHA +  +   ++ CS V+K   D  +  IP I    KL   G+R+ +YSGD D  +P+T TR  +    K++GL    P+R+W  + +   W++T
Sbjct:  284 IDIYSIYTPVCLSSLLSSSPRKPKIVVSPRLLTFDDLWDKFPAGYDPCTESYAENYFNRKDVQVALHANVTNLPYPYSPCSGVIKRWSDAPSTMIPIIQ---KLLTGGLRIWIYSGDTDGRVPVTSTRYSI----KKMGLKVESPWRSWFHKSQVAGWVET 437          

HSP 2 Score: 49.6766 bits (117), Expect = 3.114e-22
Identity = 21/47 (44.68%), Postives = 28/47 (59.57%), Query Frame = 2
Query:  548 QAAGWTQVYGDILSFATIRGASHEAPLSQPRRSLALFNAFLGGKXLP 688
            Q AGW + Y   L+F T+RGA H+ P   P +SL LF+ F+    LP
Sbjct:  430 QVAGWVETYAGGLNFVTVRGAGHQVPALAPAQSLTLFSHFISSVPLP 476          
BLAST of DC900160 vs. ExPASy Swiss-Prot
Match: SCP37_ARATH (Serine carboxypeptidase-like 37 OS=Arabidopsis thaliana GN=SCPL37 PE=2 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 6.856e-22
Identity = 47/140 (33.57%), Postives = 73/140 (52.14%), Query Frame = 1
Query:  124 EISRFVDTYDVTLDVCLPSVLLQSKMLSQLQDKEEIDVCVEDETTKYLNRKDVQKALHAQLIGVT-SWTVCSEVL--KYDMQNLEIPTIHVLGKLAKSGIRVLVYSGDQDSVLPLTGTRTLVNGLAKEIGLNTTVPYRTW 534
            +  + +DTY++   VCL S L  S++  +     E+D C +D    YLNRK VQKA+HA    +   WT C+  L   +   + + P I +L +L   G+RV++Y+GD D  +P   T  +V    KE+ L     +R W
Sbjct:  300 DAKKHLDTYNIYAPVCLNSTL--SRISKKCTTVLEVDPCSKDYLKAYLNRKKVQKAIHANTTKLPYEWTSCNNELTENWSENDRDTPMIPILHELMGEGVRVMIYNGDVDLEIPFASTLAVV----KEMNLTVVKEFRPW 433          

HSP 2 Score: 43.5134 bits (101), Expect = 6.856e-22
Identity = 19/49 (38.78%), Postives = 28/49 (57.14%), Query Frame = 2
Query:  542 GRQAAGWTQVYGDILSFATIRGASHEAPLSQPRRSLALFNAFLGGKXLP 688
            G Q  G+T+ Y   L+F T++GA H  P  QP  +L +F +F+    LP
Sbjct:  436 GGQLGGFTEDYKGNLTFVTVKGAGHSVPTDQPIHALNIFTSFIRNTPLP 484          
BLAST of DC900160 vs. ExPASy Swiss-Prot
Match: SCP26_ARATH (Serine carboxypeptidase-like 26 OS=Arabidopsis thaliana GN=SCPL26 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 8.931e-22
Identity = 45/167 (26.95%), Postives = 77/167 (46.11%), Query Frame = 1
Query:    1 LISDSTYDIFTRVCNYSQIRRQYASGSLTAVCSQVISQVSREISRFVDTYDVTLDVCLPSVLLQSKMLSQLQDK---EEIDVCVEDETTKYLNRKDVQKALHAQLIGVT-SWTVCSEVLKYDMQNLEIPTIHVLGKLAKSGIRVLVYSGDQDSVLPLTGTRTLVNGL 489
            LISD TY      C +       +S   ++ C++ +     E    +D Y +    C           S+++        D C E  +  Y N  +VQKA+HA + G+   W  CS+++     +  +  + +  +L  +G+R+ V+SGD DSV+P+TGTR  +  L
Sbjct:  231 LISDLTYHNLRITCEFG------SSEHPSSKCTKAMEAADLEQGN-IDPYSIYTVTCKKEAAALRSRFSRVRHPWMWRAYDPCTEKYSGMYFNSPEVQKAMHANITGLAYPWKGCSDIVGEKWADSPLSMLPIYKELIAAGLRIWVFSGDTDSVVPITGTRYSIRAL 390          

HSP 2 Score: 51.9878 bits (123), Expect = 8.931e-22
Identity = 25/47 (53.19%), Postives = 30/47 (63.83%), Query Frame = 2
Query:  548 QAAGWTQVYGDILSFATIRGASHEAPLSQPRRSLALFNAFLGGKXLP 688
            Q  GW+QVY   L+  TI GA HE PL +PRR+  LF +FL  K LP
Sbjct:  406 QVGGWSQVYKG-LTLVTIHGAGHEVPLFRPRRAFLLFQSFLDNKPLP 451          
BLAST of DC900160 vs. ExPASy Swiss-Prot
Match: SCP30_ARATH (Putative serine carboxypeptidase-like 30 OS=Arabidopsis thaliana GN=SCPL30 PE=2 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 2.555e-21
Identity = 55/197 (27.92%), Postives = 89/197 (45.18%), Query Frame = 1
Query:    1 LISDSTYDIFTRVCNYSQIRRQYASGSLTAVCSQVISQVSREISRFVDTYDVTLDVCLPSVLLQSKMLS-QLQDKEEI-------------DVCVEDETTKYLNRKDVQKALHAQL-IGVTSWTVCSEVLKYDMQNLEIPTIHVLGKLAKSGIRVLVYSGDQDSVLPLTGTRTLVNGLAKEIGLNTTVPYRTWVGRK 546
            +ISD T+    R+CN+S              C++ I++V ++ +  +D Y +    C       S   S Q +    I             D C++D    Y NR DVQKALHA   + + +W++C+  + ++   +    + +  KL   G+R+ VYSGD D  +P+ GTR  +N L    GL     +R W   K
Sbjct:  249 VISDETHRNINRLCNFSS-----DDVWNNDKCNEAIAEVDKQYNE-IDIYSLYTSACKGDSAKSSYFASAQFKTNYHISSKRMPPRRLAGYDPCLDDYVKVYYNRADVQKALHASDGVNLKNWSICNMEIFHNWTYVVQSVLPIYQKLIAGGLRIWVYSGDTDGCIPVLGTRYSLNAL----GLPIKTAWRPWYHEK 435          

HSP 2 Score: 45.0542 bits (105), Expect = 2.555e-21
Identity = 23/47 (48.94%), Postives = 29/47 (61.70%), Query Frame = 2
Query:  545 RQAAGWTQVYGDILSFATIRGASHEAPLSQPRRSLALFNAFLGGKXL 685
            +Q +GW Q Y D L+FAT RGA H  P  +P  SLA  +AF+ G  L
Sbjct:  435 KQVSGWVQEY-DGLTFATFRGAGHTVPSFKPSSSLAFISAFVKGVPL 480          
The following BLAST results are available for this feature:
BLAST of DC900160 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
SCP28_ARATH4.311e-2530.06Serine carboxypeptidase-like 28 OS=Arabidopsis tha... [more]
SCP29_ARATH5.608e-2529.17Serine carboxypeptidase-like 29 OS=Arabidopsis tha... [more]
CBP21_HORVU7.343e-2530.72Serine carboxypeptidase II-1 (Fragment) OS=Hordeum... [more]
CBP2_HORVU2.725e-2428.43Serine carboxypeptidase 2 OS=Hordeum vulgare GN=CB... [more]
CBP23_HORVU1.321e-2330.27Serine carboxypeptidase II-3 OS=Hordeum vulgare GN... [more]
SCP34_ARATH1.839e-2225.70Serine carboxypeptidase-like 34 OS=Arabidopsis tha... [more]
SCP35_ARATH3.114e-2232.92Serine carboxypeptidase-like 35 OS=Arabidopsis tha... [more]
SCP37_ARATH6.856e-2233.57Serine carboxypeptidase-like 37 OS=Arabidopsis tha... [more]
SCP26_ARATH8.931e-2226.95Serine carboxypeptidase-like 26 OS=Arabidopsis tha... [more]
SCP30_ARATH2.555e-2127.92Putative serine carboxypeptidase-like 30 OS=Arabid... [more]

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Properties
Property NameValue
Genbank descriptionDC900160 VSS Citrus sinensis cDNA clone VS27V80 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900160 ID=DC900160; Name=DC900160; organism=Citrus sinensis; type=EST; length=718bp
CTGATATCAGATTCAACCTACGACATTTTCACTAGGGTGTGTAATTATTC
TCAAATACGAAGACAGTATGCGAGTGGCTCTCTTACCGCTGTCTGCTCTC
AAGTAATAAGCCAAGTTTCTAGAGAGATTAGCAGATTTGTTGACACTTAC
GATGTTACACTTGATGTCTGTTTACCCTCAGTTCTTTTACAATCTAAGAT
GCTGAGTCAACTGCAAGATAAAGAGGAAATAGATGTTTGTGTCGAAGACG
AAACAACTAAATACCTTAATCGAAAAGATGTGCAGAAGGCTCTCCATGCT
CAGCTCATAGGAGTCACCAGTTGGACTGTTTGTAGCGAAGTCCTCAAATA
TGACATGCAAAATCTTGAAATCCCTACCATTCATGTTCTAGGCAAGCTCG
CCAAGTCTGGCATCAGGGTGTTGGTTTACAGCGGAGATCAAGATTCAGTC
CTCCCGCTAACTGGTACACGGACTCTAGTAAACGGATTAGCGAAGGAAAT
CGGACTAAATACAACTGTGCCTTACAGAACCTGGGTAGGAAGGAAGACAG
GCTGCTGGATGGACACAAGTATATGGTGACATTTTATCTTTTGCAACCAT
TAGAGGTGCATCACATGAAGCTCCATTGTCGCAGCCAAGGCGATCACTTG
CCCTTTTCAATGCATTTCTAGGAGGGAAGNCACTACCTGGAGCATAATTG
CATGTTGACCAATTCATG
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