CN186066
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186066 vs. ExPASy Swiss-Prot
Match: CUL5_PONAB (Cullin-5 OS=Pongo abelii GN=CUL5 PE=2 SV=3) HSP 1 Score: 91.6633 bits (226), Expect = 5.219e-18 Identity = 71/230 (30.87%), Postives = 119/230 (51.74%), Query Frame = -2 Query: 149 LCEKFRSYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADR--LSYREIEQATEIPASDLKRCLQSLACVRG--KNVLRKEPM---SKDIGEDDAFFVNDKFTS-KFYKVK-------IGTVVAQKESEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNNIIAEVTKQLQSRFLANPTEIKKRIESLIERDFLERDNVDRKLYRYLA 793 L + +Y H+GR+L W M + I GQ ++L V+T+Q+ VL +N R +S+ ++ ATE+P ++L+R L SL + VL EP KD E F VN +F+ K KV+ IG + Q +E ++E + + + R + + AI++IMK R+ + + + E+ + L++ FL IK++IE LIE ++ RD D + Y+A Sbjct: 554 LIPEVEEFYKKNHSGRKLHWHHLMSNGIITFKNEVGQ-YDLEVTTFQLAVLFAWNQRPREKISFENLKLATELPDAELRRTLWSLVAFPKLKRQVLLYEPQVNSPKDFTEGTLFSVNQEFSLIKNAKVQKRGKINLIGRL--QLTTERMREEENEGIVQLRILRTQEAIIQIMKMRKKISNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYIRRDESDINTFIYMA 780
BLAST of CN186066 vs. ExPASy Swiss-Prot
Match: CUL5_HUMAN (Cullin-5 OS=Homo sapiens GN=CUL5 PE=1 SV=4) HSP 1 Score: 91.6633 bits (226), Expect = 5.219e-18 Identity = 71/230 (30.87%), Postives = 119/230 (51.74%), Query Frame = -2 Query: 149 LCEKFRSYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADR--LSYREIEQATEIPASDLKRCLQSLACVRG--KNVLRKEPM---SKDIGEDDAFFVNDKFTS-KFYKVK-------IGTVVAQKESEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNNIIAEVTKQLQSRFLANPTEIKKRIESLIERDFLERDNVDRKLYRYLA 793 L + +Y H+GR+L W M + I GQ ++L V+T+Q+ VL +N R +S+ ++ ATE+P ++L+R L SL + VL EP KD E F VN +F+ K KV+ IG + Q +E ++E + + + R + + AI++IMK R+ + + + E+ + L++ FL IK++IE LIE ++ RD D + Y+A Sbjct: 554 LIPEVEEFYKKNHSGRKLHWHHLMSNGIITFKNEVGQ-YDLEVTTFQLAVLFAWNQRPREKISFENLKLATELPDAELRRTLWSLVAFPKLKRQVLLYEPQVNSPKDFTEGTLFSVNQEFSLIKNAKVQKRGKINLIGRL--QLTTERMREEENEGIVQLRILRTQEAIIQIMKMRKKISNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYIRRDESDINTFIYMA 780
BLAST of CN186066 vs. ExPASy Swiss-Prot
Match: CUL5_RAT (Cullin-5 OS=Rattus norvegicus GN=Cul5 PE=1 SV=3) HSP 1 Score: 90.5077 bits (223), Expect = 1.163e-17 Identity = 70/230 (30.43%), Postives = 118/230 (51.30%), Query Frame = -2 Query: 149 LCEKFRSYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADR--LSYREIEQATEIPASDLKRCLQSLACVRG--KNVLRKEPM---SKDIGEDDAFFVNDKFTS-KFYKVK-------IGTVVAQKESEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNNIIAEVTKQLQSRFLANPTEIKKRIESLIERDFLERDNVDRKLYRYLA 793 L + +Y H+GR+L W M + I GQ ++L V+T+Q+ VL +N R +S+ ++ ATE+P ++L+R L SL + VL +P KD E F VN F+ K KV+ IG + Q +E ++E + + + R + + AI++IMK R+ + + + E+ + L++ FL IK++IE LIE ++ RD D + Y+A Sbjct: 554 LIPEVEEFYKKNHSGRKLHWHHLMSNGIITFKNEVGQ-YDLEVTTFQLAVLFAWNQRPREKISFENLKLATELPDAELRRTLWSLVAFPKLKRQVLLYDPQVNSPKDFTEGTLFSVNQDFSLIKNAKVQKRGKINLIGRL--QLTTERMREEENEGIVQLRILRTQEAIIQIMKMRKKISNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYIRRDEADINTFIYMA 780
BLAST of CN186066 vs. ExPASy Swiss-Prot
Match: CUL5_MOUSE (Cullin-5 OS=Mus musculus GN=Cul5 PE=1 SV=3) HSP 1 Score: 88.9669 bits (219), Expect = 3.383e-17 Identity = 69/230 (30.00%), Postives = 118/230 (51.30%), Query Frame = -2 Query: 149 LCEKFRSYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADR--LSYREIEQATEIPASDLKRCLQSLACVRG--KNVLRKEPM---SKDIGEDDAFFVNDKFTS-KFYKVK-------IGTVVAQKESEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNNIIAEVTKQLQSRFLANPTEIKKRIESLIERDFLERDNVDRKLYRYLA 793 L + +Y H+GR+L W M + I GQ ++L V+T+Q+ VL +N R +S+ ++ ATE+P ++L+R L SL + VL +P KD E F VN F+ K KV+ IG + Q +E ++E + + + R + + AI++IMK R+ + + + E+ + L++ FL IK+++E LIE ++ RD D + Y+A Sbjct: 554 LIPEVEEFYKKNHSGRKLHWHHLMSNGIITFKNEVGQ-YDLEVTTFQLAVLFAWNQRPREKISFENLKLATELPDAELRRTLWSLVAFPKLKRQVLLYDPQVNSPKDFTEGTLFSVNQDFSLIKNAKVQKRGKINLIGRL--QLTTERMREEENEGIVQLRILRTQEAIIQIMKMRKKISNAQLQTELVEILKNMFLPQKKMIKEQMEWLIEHRYIRRDEADINTFIYMA 780
BLAST of CN186066 vs. ExPASy Swiss-Prot
Match: CUL5_RABIT (Cullin-5 OS=Oryctolagus cuniculus GN=CUL5 PE=2 SV=3) HSP 1 Score: 87.0409 bits (214), Expect = 1.285e-16 Identity = 69/230 (30.00%), Postives = 116/230 (50.43%), Query Frame = -2 Query: 149 LCEKFRSYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNADR--LSYREIEQATEIPASDLKRCLQSLACVRG--KNVLRKEPM---SKDIGEDDAFFVNDKFTS-KFYKVK-------IGTVVAQKESEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNNIIAEVTKQLQSRFLANPTEIKKRIESLIERDFLERDNVDRKLYRYLA 793 L + +Y H+GR+L W M + I GQ ++L V+T+Q+ VL +N R +S+ ++ ATE+P ++L+R L SL + VL EP KD E F VN +F+ K KV+ IG + Q +E ++E + + + R + ++IMK R+ + + + E+ + L++ FL IK++IE LIE ++ RD D + Y+A Sbjct: 554 LIPEVEEFYKKNHSGRKLHWHHLMSNGIITFKNEVGQ-YDLEVTTFQLAVLFAWNQRPREKISFENLKLATELPDAELRRTLWSLVAFPKLKRQVLLYEPQVNSPKDFTEGTLFSVNQEFSLIKNAKVQKRGKINLIGRL--QLTTERMREEENEGIVQLRILRTRKLYIQIMKMRKKISNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKYIRRDESDINTFIYMA 780
BLAST of CN186066 vs. ExPASy Swiss-Prot
Match: CUL5_CAEEL (Cullin-5 OS=Caenorhabditis elegans GN=cul-5 PE=1 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 9.212e-15 Identity = 61/229 (26.64%), Postives = 113/229 (49.34%), Query Frame = -2 Query: 149 KFRSYYLGTHTGRRLSWQTNMGSADIKATFGKGQKHELNVSTYQMCVLMLFNNA--DRLSYREIEQATEIPASDLKRCLQSLAC---VRGKNVLRKEPMS----KDIGEDDAFFVNDKF-------TSKFYKVK-IGTVVAQKESEPEKQETRQRVEEDRKPQIEAAIVRIMKSRRVLDHNNIIAEVTKQLQSRFLANPTEIKKRIESLIERDFLERDNVDRKLYRYLA 784 + ++Y H GR+L W + S + G + +L +T+QM VL FN+ D++S + ATE+P ++L R L SL +R + +L P + +D + F +N F + + KV IG + E+ EK+ + + R+ +++ IV+I+K+R+ + E+ + L+ F+ N IK++I+ LIE ++ER D + Y++ Sbjct: 539 EMEAFYKKQHNGRKLCWMHHWSSGTMVFGTANGGRFDLECTTFQMAVLFCFNDRAHDKISLETLRLATELPDAELNRTLLSLVAYPKMRYQILLCDVPSTTVTARDFTDSTKFLINHDFNVVKNGKSQQRGKVNLIGRLQLSLEANAEKEH--ESIVALRELRVQEGIVKILKTRKTYTLAQLTMELVEILKPLFIPNRKIIKEQIDWLIENKYMERRADDINTFVYIS 765 The following BLAST results are available for this feature:
BLAST of CN186066 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 36
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN186066 ID=CN186066; Name=CN186066; organism=Citrus sinensis; type=EST; length=800bpback to top |