DC900142
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900142 vs. ExPASy Swiss-Prot
Match: RL37_ICTPU (60S ribosomal protein L37 OS=Ictalurus punctatus GN=rpl37 PE=3 SV=3) HSP 1 Score: 117.472 bits (293), Expect = 3.270e-26 Identity = 52/73 (71.23%), Postives = 60/73 (82.19%), Query Frame = 1 Query: 1 KRRNKTHTLCVRCGRRSFHLQKSRCAACAYPAARKRTYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGT 219 KRRNKTHTLC RCG +++HLQKS C C YPA RKR YNWS KA RR TTGTGRMR+++ V RRF++GFREGT Sbjct: 10 KRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRSTTGTGRMRHMKVVFRRFRNGFREGT 82
BLAST of DC900142 vs. ExPASy Swiss-Prot
Match: RL37_CANAL (60S ribosomal protein L37 (Fragment) OS=Candida albicans GN=RPL37 PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 5.577e-26 Identity = 49/72 (68.06%), Postives = 62/72 (86.11%), Query Frame = 1 Query: 1 KRRNKTHTLCVRCGRRSFHLQKSRCAACAYPAARKRTYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREG 216 KR NK+HTLC RCGRRSFH+QK C++C YPAA+ R++NW++KA RR+TTGTGRM YL+HV RRFK+GF+ G Sbjct: 8 KRHNKSHTLCNRCGRRSFHVQKKTCSSCGYPAAKMRSHNWALKAKRRRTTGTGRMAYLKHVTRRFKNGFQTG 79
BLAST of DC900142 vs. ExPASy Swiss-Prot
Match: RL37B_YEAST (60S ribosomal protein L37-B OS=Saccharomyces cerevisiae GN=RPL37B PE=1 SV=2) HSP 1 Score: 116.701 bits (291), Expect = 5.577e-26 Identity = 49/73 (67.12%), Postives = 62/73 (84.93%), Query Frame = 1 Query: 1 KRRNKTHTLCVRCGRRSFHLQKSRCAACAYPAARKRTYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGT 219 KR NK+HTLC RCGRRSFH+QK C++C YP+A+ R++NW+ KA RR TTGTGRMRYL+HV RRFK+GF+ G+ Sbjct: 10 KRHNKSHTLCNRCGRRSFHVQKKTCSSCGYPSAKTRSHNWAAKAKRRHTTGTGRMRYLKHVSRRFKNGFQTGS 82
BLAST of DC900142 vs. ExPASy Swiss-Prot
Match: RL37_EMENI (60S ribosomal protein L37 OS=Emericella nidulans GN=rpl37 PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 2.768e-25 Identity = 52/73 (71.23%), Postives = 59/73 (80.82%), Query Frame = 1 Query: 1 KRRNKTHTLCVRCGRRSFHLQKSRCAACAYPAARKRTYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGT 219 KR NKTHTLC RCGRRS+H+QKS CA C YPAA+ R YNWS KA RRKTTG+GR +LR V RRFK+GF+ GT Sbjct: 10 KRHNKTHTLCRRCGRRSYHIQKSTCANCGYPAAKTRKYNWSEKAKRRKTTGSGRTAHLRDVHRRFKNGFQVGT 82
BLAST of DC900142 vs. ExPASy Swiss-Prot
Match: RL37_DEBHA (60S ribosomal protein L37 OS=Debaryomyces hansenii GN=RPL37 PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 3.615e-25 Identity = 48/72 (66.67%), Postives = 60/72 (83.33%), Query Frame = 1 Query: 1 KRRNKTHTLCVRCGRRSFHLQKSRCAACAYPAARKRTYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREG 216 KR NK+H LC RCG+RSFH+QK CA+C YPAA+ R++NW+ KA RR+TTGTGRM YL+HV RRFK+GF+ G Sbjct: 10 KRHNKSHVLCNRCGKRSFHVQKKTCASCGYPAAKLRSHNWATKAKRRRTTGTGRMAYLKHVSRRFKNGFQTG 81
BLAST of DC900142 vs. ExPASy Swiss-Prot
Match: RL37B_SCHPO (60S ribosomal protein L37-B OS=Schizosaccharomyces pombe GN=rpl37b PE=1 SV=4) HSP 1 Score: 112.464 bits (280), Expect = 1.052e-24 Identity = 48/71 (67.61%), Postives = 57/71 (80.28%), Query Frame = 1 Query: 4 RRNKTHTLCVRCGRRSFHLQKSRCAACAYPAARKRTYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREG 216 R NK+HT+C RCG+RSFH+QKS CA C YPAA+ R+YNW KA RR+TTGTGRM YL+ V R FK+GFR G Sbjct: 11 RHNKSHTICRRCGKRSFHIQKSTCACCGYPAAKTRSYNWGAKAKRRRTTGTGRMSYLKKVHRSFKNGFRSG 81
BLAST of DC900142 vs. ExPASy Swiss-Prot
Match: RL37A_SCHPO (60S ribosomal protein L37-A OS=Schizosaccharomyces pombe GN=rpl37a PE=1 SV=2) HSP 1 Score: 112.079 bits (279), Expect = 1.374e-24 Identity = 48/71 (67.61%), Postives = 57/71 (80.28%), Query Frame = 1 Query: 4 RRNKTHTLCVRCGRRSFHLQKSRCAACAYPAARKRTYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREG 216 R NK+HT+C RCG+RSFH+QKS CA C YPAA+ R+YNW KA RR+TTGTGRM YL+ V R FK+GFR G Sbjct: 11 RHNKSHTICRRCGKRSFHIQKSTCACCGYPAAKTRSYNWGAKAKRRRTTGTGRMSYLKKVHRSFKNGFRAG 81
BLAST of DC900142 vs. ExPASy Swiss-Prot
Match: RL37_DICDI (60S ribosomal protein L37 OS=Dictyostelium discoideum GN=rpl37 PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 6.818e-24 Identity = 46/73 (63.01%), Postives = 59/73 (80.82%), Query Frame = 1 Query: 1 KRRNKTHTLCVRCGRRSFHLQKSRCAACAYPAARKRTYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREGT 219 +R K+HTLC RCG+ SFH+QK CA+C YP+A+ R+YNWS+KA RRKTTGTGR RYL+ V +RF SGF+E + Sbjct: 10 RRHTKSHTLCRRCGKSSFHIQKKTCASCGYPSAKTRSYNWSIKAQRRKTTGTGRTRYLKTVHKRFNSGFKEAS 82
BLAST of DC900142 vs. ExPASy Swiss-Prot
Match: RL37_SCHMA (60S ribosomal protein L37 OS=Schistosoma mansoni GN=RPL37 PE=3 SV=3) HSP 1 Score: 108.997 bits (271), Expect = 1.163e-23 Identity = 47/72 (65.28%), Postives = 57/72 (79.17%), Query Frame = 1 Query: 1 KRRNKTHTLCVRCGRRSFHLQKSRCAACAYPAARKRTYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREG 216 KR NK+HT C RCGR+S+H+QK C++C YP+AR R YNWS KA RR+TTGTGRM +L+ V RRFK GFR G Sbjct: 10 KRHNKSHTQCRRCGRKSYHIQKKTCSSCGYPSARLRKYNWSEKAKRRRTTGTGRMLHLKRVHRRFKQGFRSG 81
BLAST of DC900142 vs. ExPASy Swiss-Prot
Match: RL372_DROME (Probable 60S ribosomal protein L37-B OS=Drosophila melanogaster GN=RpL37b PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 2.591e-23 Identity = 46/72 (63.89%), Postives = 58/72 (80.56%), Query Frame = 1 Query: 1 KRRNKTHTLCVRCGRRSFHLQKSRCAACAYPAARKRTYNWSVKAIRRKTTGTGRMRYLRHVPRRFKSGFREG 216 KR NKTHT+C RCG S+HLQKS+C+ C YPAA+ R++NWS KA RK GTGRMRYL+++ RRF++G REG Sbjct: 10 KRHNKTHTICRRCGNSSYHLQKSKCSQCGYPAAKTRSFNWSRKAKGRKAQGTGRMRYLKNLRRRFRNGLREG 81 The following BLAST results are available for this feature:
BLAST of DC900142 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900142 ID=DC900142; Name=DC900142; organism=Citrus sinensis; type=EST; length=487bpback to top |