CN186016

Overview
NameCN186016
Unique NameCN186016
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length742
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN186016 vs. ExPASy Swiss-Prot
Match: PPIF_HUMAN (Peptidyl-prolyl cis-trans isomerase, mitochondrial OS=Homo sapiens GN=PPIF PE=1 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.411e-51
Identity = 100/165 (60.61%), Postives = 116/165 (70.30%), Query Frame = 3
Query:  144 VYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAERRQNGTPKSKVVIADSGE 638
            VY DV+  GKP GR+V+ L    VPKTAENFRALCTGEKG G       YKGSTFHR+IPSFM Q            +SIYG +FPDENF LKH GPG+LSMANAGP+TNGSQFFI T+ T WLDG+HVVFG V  GMDVV K+E+   ++G    K+VI D G+
Sbjct:   48 VYLDVDANGKPLGRVVLELKADVVPKTAENFRALCTGEKGFG-------YKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVKEGMDVVKKIESFGSKSGRTSKKIVITDCGQ 205          
BLAST of CN186016 vs. ExPASy Swiss-Prot
Match: PPIA2_RHIOR (Peptidyl-prolyl cis-trans isomerase A2 OS=Rhizopus oryzae GN=cyp1 PE=3 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.411e-51
Identity = 104/164 (63.41%), Postives = 117/164 (71.34%), Query Frame = 3
Query:  144 VYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAERRQNGTPKSKVVIADSG 635
            VYFD+ I GKPAGRI   LF   VPKTA+NFRALCTGE+G G       YKGS FHR+IP FMLQ            +SIYGEKF DENFKLKH+ PGLLSMANAGP+TNGSQFFITTV  SWLDG HVVFGKV   M++V K+E+    +G  K+KVVI D G
Sbjct:    3 VYFDISIDGKPAGRIEFQLFEDVVPKTAKNFRALCTGEQGFG-------YKGSKFHRVIPQFMLQGGDFTRGDGTGGKSIYGEKFADENFKLKHSEPGLLSMANAGPNTNGSQFFITTVPCSWLDGAHVVFGKVTKNMELVSKIESLGSASGAVKAKVVIEDCG 159          
BLAST of CN186016 vs. ExPASy Swiss-Prot
Match: PPIB_MOUSE (Peptidyl-prolyl cis-trans isomerase B OS=Mus musculus GN=Ppib PE=2 SV=2)

HSP 1 Score: 202.601 bits (514), Expect = 1.843e-51
Identity = 103/171 (60.23%), Postives = 121/171 (70.76%), Query Frame = 3
Query:  129 EITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAERRQN-GTPKSKVVIADSGE 638
            ++T KVYFD++I  +  GR+V GLFGK VPKT +NF AL TGEKG G       YK S FHR+I  FM+Q            +SIYGE+FPDENFKLKH GPG +SMANAG DTNGSQFFITTV TSWLDG+HVVFGKVL GMDVV KVE+ +  +   P   V+I DSG+
Sbjct:   41 KVTVKVYFDLQIGDESVGRVVFGLFGKTVPKTVDNFVALATGEKGFG-------YKNSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTSWLDGKHVVFGKVLEGMDVVRKVESTKTDSRDKPLKDVIIVDSGK 204          
BLAST of CN186016 vs. ExPASy Swiss-Prot
Match: PPIB_ASPNG (Peptidyl-prolyl cis-trans isomerase B OS=Aspergillus niger GN=cypB PE=3 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 2.407e-51
Identity = 105/190 (55.26%), Postives = 129/190 (67.89%), Query Frame = 3
Query:   72 VLLATFSSIQAKKSDQNLKEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVE-AERRQNGTPKSKVVIADSGE 638
            VL    + + A+ +     +IT+KV+FD+E   KP GR+V+GL+GK VPKTAENFRAL TGEKG G       Y+GSTFHR+I  FM+Q            +SIYGEKF DENFKL+HT  GLLSMANAG DTNGSQFFITTV T WLDGRHVVFG+VL G ++V ++E   + ++  P   V I  SGE
Sbjct:   13 VLAVGLALVHAEDAQPRGPKITSKVFFDIEHGDKPLGRVVLGLYGKTVPKTAENFRALATGEKGFG-------YEGSTFHRVIKDFMIQGGDFTRGDGTGGKSIYGEKFADENFKLRHTRKGLLSMANAGKDTNGSQFFITTVPTPWLDGRHVVFGEVLEGYEIVAQIENVPKGRSDRPVETVKIVKSGE 195          
BLAST of CN186016 vs. ExPASy Swiss-Prot
Match: PPIB_YARLI (Peptidyl-prolyl cis-trans isomerase B OS=Yarrowia lipolytica GN=CPR2 PE=3 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 7.002e-51
Identity = 109/191 (57.07%), Postives = 130/191 (68.06%), Query Frame = 3
Query:   69 VVLLATFSSIQAKKSDQNLKEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVE-AERRQNGTPKSKVVIADSGE 638
            V LLA F  +Q  +++ +  EIT+KVYFD++   +  G+IVMGL+G  VPKT ENFRALCTGE G G       YKGS FHR+I +FM+Q            ESIYG KFPDENF+LKHT P  LSMANAG DTNGSQFFITTV TSWLDG+HVVFG+VL G D+V  +E A       PK  + IAD+GE
Sbjct:   12 VALLAFF--VQPAQAEPDA-EITHKVYFDIKQGEESLGKIVMGLYGDVVPKTVENFRALCTGETGKG-------YKGSKFHRVIKNFMIQGGDFTRGDGTGGESIYGRKFPDENFQLKHTKPYKLSMANAGRDTNGSQFFITTVVTSWLDGKHVVFGEVLEGQDIVDAIENAPTGARSNPKVDITIADAGE 192          
BLAST of CN186016 vs. ExPASy Swiss-Prot
Match: PPIB_SCHMA (Peptidyl-prolyl cis-trans isomerase B OS=Schistosoma mansoni GN=CYP PE=2 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 7.002e-51
Identity = 99/177 (55.93%), Postives = 126/177 (71.19%), Query Frame = 3
Query:  108 KSDQNLKEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAERRQN-GTPKSKVVIADSG 635
            +S+ N  ++T+KV+FD+E+ GKP  RI++GLFGK VPKT ENF+ L  G +   K G+   YKGSTFHR+I SFM+Q             SIYG++FPDENFKL+H G G LSMANAGPDTNGSQFFITTV TSWLDG+HVVFGKV+ GM++V ++E+E   +   P   + IA  G
Sbjct:   22 RSEANGPKVTDKVFFDIEVDGKPLARIIIGLFGKTVPKTVENFKQLSIGTQL--KDGRTASYKGSTFHRVIKSFMIQGGDFTNHDGTGGFSIYGDRFPDENFKLRHVGAGWLSMANAGPDTNGSQFFITTVKTSWLDGKHVVFGKVVEGMNIVRQIESETTDSRDRPVKSIKIASCG 196          
BLAST of CN186016 vs. ExPASy Swiss-Prot
Match: PPIB_ASPFU (Peptidyl-prolyl cis-trans isomerase B OS=Aspergillus fumigatus GN=cpr2 PE=3 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 7.002e-51
Identity = 105/171 (61.40%), Postives = 122/171 (71.35%), Query Frame = 3
Query:  129 EITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAERRQNG-TPKSKVVIADSGE 638
            +IT+KV+FD+E   KP GRIV+GL+GK VPKTAENFRAL TGEKG G       Y+GSTFHR+I SFM+Q            +SIYGEKF DENFKL+HT  GLLSMANAG DTNGSQFFITTV T WLDGRHVVFG+VL G +VV ++E   +  G  P   V I  SG+
Sbjct:   33 KITSKVFFDIEHGDKPLGRIVLGLYGKTVPKTAENFRALATGEKGFG-------YEGSTFHRVIKSFMIQGGDFTRGDGTGGKSIYGEKFADENFKLRHTRKGLLSMANAGKDTNGSQFFITTVPTPWLDGRHVVFGEVLEGYEVVEQIENVPKGPGDKPAETVKIVKSGQ 196          
BLAST of CN186016 vs. ExPASy Swiss-Prot
Match: CP20C_ARATH (Peptidyl-prolyl cis-trans isomerase CYP20-3, chloroplastic OS=Arabidopsis thaliana GN=CYP20-3 PE=1 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 7.002e-51
Identity = 106/171 (61.99%), Postives = 120/171 (70.18%), Query Frame = 3
Query:  129 EITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEA-ERRQNGTPKSKVVIADSGE 638
            ++TNKVYFDVEI G+ AGRIVMGLFG+ VPKT ENFRALCTGEK  G       YKGS+FHRII  FM+Q             SIYG KF DENF LKHTGPG+LSMANAGP+TNGSQFFI TV TSWLD +HVVFG+V+ GM +V  +E+ E R    PK    I   GE
Sbjct:   92 KVTNKVYFDVEIGGEVAGRIVMGLFGEVVPKTVENFRALCTGEKKYG-------YKGSSFHRIIKDFMIQGGDFTEGNGTGGISIYGAKFEDENFTLKHTGPGILSMANAGPNTNGSQFFICTVKTSWLDNKHVVFGQVIEGMKLVRTLESQETRAFDVPKKGCRIYACGE 255          
BLAST of CN186016 vs. ExPASy Swiss-Prot
Match: PPID_RHIOR (Peptidyl-prolyl cis-trans isomerase D OS=Rhizopus oryzae GN=cyp12 PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 9.145e-51
Identity = 106/166 (63.86%), Postives = 114/166 (68.67%), Query Frame = 3
Query:  141 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAERRQNGTPKSKVVIADSGE 638
            +VYFD+ I  KP GRIV  LF   VPKTAENFRALCTGEKG GKSGKPL Y+GS FHRII +FM+Q            ESIYGEKF DENF LKH  P LLSMANAGP TNGSQFFITTV T  LDG+HVVFGKVL G  VV  +E     +  P    VIA  GE
Sbjct:    5 RVYFDITIGNKPEGRIVFELFKDIVPKTAENFRALCTGEKGEGKSGKPLSYQGSLFHRIIKNFMIQGGDFTAGNGTGGESIYGEKFEDENFVLKHEKPFLLSMANAGPGTNGSQFFITTVPTPHLDGKHVVFGKVLKGKAVVRALENLETVSDRPVEDAVIAKCGE 170          
BLAST of CN186016 vs. ExPASy Swiss-Prot
Match: PPIB_RAT (Peptidyl-prolyl cis-trans isomerase B OS=Rattus norvegicus GN=Ppib PE=2 SV=3)

HSP 1 Score: 200.29 bits (508), Expect = 9.145e-51
Identity = 102/171 (59.65%), Postives = 118/171 (69.01%), Query Frame = 3
Query:  129 EITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAERRQN-GTPKSKVVIADSGE 638
            ++T KVYFD +I  +P GR+  GLFGK VPKT +NF AL TGEKG G       YK S FHR+I  FM+Q            +SIYGE+FPDENFKLKH GPG +SMANAG DTNGSQFFITTV TSWLDG+HVVFGKVL GMDVV KVE  +  +   P   V+I D G+
Sbjct:   41 KVTVKVYFDFQIGDEPVGRVTFGLFGKTVPKTVDNFVALATGEKGFG-------YKNSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTSWLDGKHVVFGKVLEGMDVVRKVENTKTDSRDKPLKDVIIVDCGK 204          
The following BLAST results are available for this feature:
BLAST of CN186016 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 234
Match NameE-valueIdentityDescription
PPIF_HUMAN1.411e-5160.61Peptidyl-prolyl cis-trans isomerase, mitochondrial... [more]
PPIA2_RHIOR1.411e-5163.41Peptidyl-prolyl cis-trans isomerase A2 OS=Rhizopus... [more]
PPIB_MOUSE1.843e-5160.23Peptidyl-prolyl cis-trans isomerase B OS=Mus muscu... [more]
PPIB_ASPNG2.407e-5155.26Peptidyl-prolyl cis-trans isomerase B OS=Aspergill... [more]
PPIB_YARLI7.002e-5157.07Peptidyl-prolyl cis-trans isomerase B OS=Yarrowia ... [more]
PPIB_SCHMA7.002e-5155.93Peptidyl-prolyl cis-trans isomerase B OS=Schistoso... [more]
PPIB_ASPFU7.002e-5161.40Peptidyl-prolyl cis-trans isomerase B OS=Aspergill... [more]
CP20C_ARATH7.002e-5161.99Peptidyl-prolyl cis-trans isomerase CYP20-3, chlor... [more]
PPID_RHIOR9.145e-5163.86Peptidyl-prolyl cis-trans isomerase D OS=Rhizopus ... [more]
PPIB_RAT9.145e-5159.65Peptidyl-prolyl cis-trans isomerase B OS=Rattus no... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002D19_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002D19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186016 ID=CN186016; Name=CN186016; organism=Citrus sinensis; type=EST; length=742bp
AGTAACGAGAAACAACGAAGTGATACATGGCTTCGACAAATTTGCTTCCA
CTCACGATGCTATGGGCTGTTGTCCTGTTGGCCACTTTCTCTTCAATTCA
GGCGAAGAAATCGGATCAGAATTTGAAAGAAATCACAAACAAAGTTTACT
TTGACGTTGAGATTGCCGGAAAACCTGCCGGACGTATTGTAATGGGTCTC
TTTGGAAAGGCAGTCCCTAAAACTGCAGAAAATTTCCGAGCTTTGTGCAC
AGGGGAGAAAGGGATTGGCAAGAGTGGGAAGCCACTCCACTACAAGGGAA
GTACGTTTCATAGGATTATTCCCAGCTTTATGCTTCAAGGAGGTGATTTC
ACTCTTGGTGATGGAAGAGGTGGAGAGTCAATTTATGGAGAGAAGTTCCC
TGACGAAAATTTCAAACTGAAGCACACCGGCCCAGGGCTTTTGTCAATGG
CAAATGCTGGGCCAGACACCAATGGTTCACAATTCTTCATTACAACTGTG
ACAACTAGCTGGTTGGATGGCAGGCATGTTGTATTTGGAAAGGTGCTATC
GGGGATGGATGTAGTTTACAAGGTTGAAGCTGAAAGGAGGCAGAATGGCA
CTCCGAAGAGCAAAGTCGTCATTGCAGACAGCGGTGAACTTCCTCTGTGA
TTTCCCCCATAATTATATAATTACGCTATACACCTTTTTAATCCTCTCGT
CTTTTCAACCTTCATGAAGATACTCTTAATTTGCCTATTTAT
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