CN186013

Overview
NameCN186013
Unique NameCN186013
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length786
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CN186013 vs. ExPASy Swiss-Prot
Match: METK2_PETHY (S-adenosylmethionine synthetase 2 OS=Petunia hybrida GN=SAM2 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 7.784e-19
Identity = 42/53 (79.25%), Postives = 49/53 (92.45%), Query Frame = -3 
Query:  149 METFLFTSESVNEGYPDKLCDHISDAILDACLEQDPDRKLACETCTKDLVMVV 307
            METFLFTSESVNEG+PDKLCD +SDAILDACLEQDP+ K+ACETCTK  +++V
Sbjct:    1 METFLFTSESVNEGHPDKLCDQVSDAILDACLEQDPESKVACETCTKTSMVMV 53
[Close]
BLAST of CN186013 vs. ExPASy Swiss-Prot
Match: METK1_TOBAC (S-adenosylmethionine synthetase 1 OS=Nicotiana tabacum GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 7.784e-19
Identity = 44/53 (83.02%), Postives = 50/53 (94.34%), Query Frame = -3 
Query:  152 METFLFTSESVNEGYPDKLCDHISDAILDACLEQDPDRKLACETCTK-DLVMV 307
            METFLFTSESVNEG+PDKLCD +SDAILDACLEQDP+ K+ACETCTK ++VMV
Sbjct:    1 METFLFTSESVNEGHPDKLCDQVSDAILDACLEQDPESKVACETCTKTNMVMV 53
[Close]
BLAST of CN186013 vs. ExPASy Swiss-Prot
Match: METK1_PETHY (S-adenosylmethionine synthetase 1 OS=Petunia hybrida GN=SAM1 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 7.784e-19
Identity = 44/53 (83.02%), Postives = 50/53 (94.34%), Query Frame = -3 
Query:  152 METFLFTSESVNEGYPDKLCDHISDAILDACLEQDPDRKLACETCTK-DLVMV 307
            METFLFTSESVNEG+PDKLCD +SDAILDACLEQDP+ K+ACETCTK ++VMV
Sbjct:    1 METFLFTSESVNEGHPDKLCDQVSDAILDACLEQDPESKVACETCTKTNMVMV 53
[Close]
BLAST of CN186013 vs. ExPASy Swiss-Prot
Match: METK_MEDTR (S-adenosylmethionine synthetase OS=Medicago truncatula GN=METK PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.017e-18
Identity = 44/52 (84.62%), Postives = 49/52 (94.23%), Query Frame = -3 
Query:  152 ETFLFTSESVNEGYPDKLCDHISDAILDACLEQDPDRKLACETCTK-DLVMV 304
            ETFLFTSESVNEG+PDKLCD ISDA+LDACLEQDPD K+ACETCTK ++VMV
Sbjct:    3 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMV 54
[Close]
BLAST of CN186013 vs. ExPASy Swiss-Prot
Match: METK_PINBN (S-adenosylmethionine synthetase OS=Pinus banksiana GN=METK PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.328e-18
Identity = 44/53 (83.02%), Postives = 49/53 (92.45%), Query Frame = -3 
Query:  152 METFLFTSESVNEGYPDKLCDHISDAILDACLEQDPDRKLACETCTK-DLVMV 307
            METFLFTSESVNEG+PDKLCD ISDA+LDACL QDPD K+ACETCTK ++VMV
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLAQDPDSKVACETCTKTNMVMV 53
[Close]
BLAST of CN186013 vs. ExPASy Swiss-Prot
Match: METK_CARPA (S-adenosylmethionine synthetase OS=Carica papaya GN=SAMS PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.328e-18
Identity = 44/53 (83.02%), Postives = 49/53 (92.45%), Query Frame = -3 
Query:  152 METFLFTSESVNEGYPDKLCDHISDAILDACLEQDPDRKLACETCTK-DLVMV 307
            METFLFTSESVNEG+PDKLCD ISDA+LDACL QDPD K+ACETCTK ++VMV
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLAQDPDSKVACETCTKTNMVMV 53
[Close]
BLAST of CN186013 vs. ExPASy Swiss-Prot
Match: METK5_VITVI (S-adenosylmethionine synthetase 5 OS=Vitis vinifera GN=METK5 PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.328e-18
Identity = 44/53 (83.02%), Postives = 49/53 (92.45%), Query Frame = -3 
Query:  152 METFLFTSESVNEGYPDKLCDHISDAILDACLEQDPDRKLACETCTK-DLVMV 307
            METFLFTSESVNEG+PDKLCD ISDA+LDACL QDPD K+ACETCTK ++VMV
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLAQDPDSKVACETCTKTNMVMV 53
[Close]
BLAST of CN186013 vs. ExPASy Swiss-Prot
Match: METK3_PICSI (S-adenosylmethionine synthetase 3 OS=Picea sitchensis GN=METK3 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.328e-18
Identity = 44/53 (83.02%), Postives = 49/53 (92.45%), Query Frame = -3 
Query:  152 METFLFTSESVNEGYPDKLCDHISDAILDACLEQDPDRKLACETCTK-DLVMV 307
            METFLFTSESVNEG+PDKLCD ISDA+LDACL QDPD K+ACETCTK ++VMV
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLTQDPDSKVACETCTKTNMVMV 53
[Close]
BLAST of CN186013 vs. ExPASy Swiss-Prot
Match: METK2_PINCO (S-adenosylmethionine synthetase 2 OS=Pinus contorta GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.328e-18
Identity = 44/53 (83.02%), Postives = 49/53 (92.45%), Query Frame = -3 
Query:  152 METFLFTSESVNEGYPDKLCDHISDAILDACLEQDPDRKLACETCTK-DLVMV 307
            METFLFTSESVNEG+PDKLCD ISDA+LDACL QDPD K+ACETCTK ++VMV
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLTQDPDSKVACETCTKTNMVMV 53
[Close]
BLAST of CN186013 vs. ExPASy Swiss-Prot
Match: METK_PHALU (S-adenosylmethionine synthetase OS=Phaseolus lunatus GN=SAMS PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.734e-18
Identity = 44/52 (84.62%), Postives = 49/52 (94.23%), Query Frame = -3 
Query:  152 ETFLFTSESVNEGYPDKLCDHISDAILDACLEQDPDRKLACETCTK-DLVMV 304
            ETFLFTSESVNEG+PDKLCD ISDA+LDACLEQDP+ K+ACETCTK +LVMV
Sbjct:    3 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNLVMV 54
The following BLAST results are available for this feature:
BLAST of CN186013 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 211
Match NameE-valueIdentityDescription
METK2_PETHY7.784e-1979.25S-adenosylmethionine synthetase 2 OS=Petunia hybri... [more]
METK1_TOBAC7.784e-1983.02S-adenosylmethionine synthetase 1 OS=Nicotiana tab... [more]
METK1_PETHY7.784e-1983.02S-adenosylmethionine synthetase 1 OS=Petunia hybri... [more]
METK_MEDTR1.017e-1884.62S-adenosylmethionine synthetase OS=Medicago trunca... [more]
METK_PINBN1.328e-1883.02S-adenosylmethionine synthetase OS=Pinus banksiana... [more]
METK_CARPA1.328e-1883.02S-adenosylmethionine synthetase OS=Carica papaya G... [more]
METK5_VITVI1.328e-1883.02S-adenosylmethionine synthetase 5 OS=Vitis vinifer... [more]
METK3_PICSI1.328e-1883.02S-adenosylmethionine synthetase 3 OS=Picea sitchen... [more]
METK2_PINCO1.328e-1883.02S-adenosylmethionine synthetase 2 OS=Pinus contort... [more]
METK_PHALU1.734e-1884.62S-adenosylmethionine synthetase OS=Phaseolus lunat... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002D17_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002D17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186013 ID=CN186013; Name=CN186013; organism=Citrus sinensis; type=EST; length=786bp
TTTTTTTTTTTTTTTTGAATTTACACTTCTATTAACTACCAAGTCCCATT
TATACTCTACACACATAATATTAATAAACTATATATGAATAAACAAACAT
AAAATCCTCAAATCAAAAGCAATTCTCGGCCGCAATATACAATAGCAATA
CAACCATAACCAAGTCTTTGGTACAGGTTTCACAAGCCAACTTCCTATCT
GGGTCTTGTTCGAGACAAGCATCGAGAATGGCATCGGAGATATGATCACA
GAGCTTGTCTGGATAACCCTCGTTCACAGATTCTGAAGTGAACAAAAAAG
TCTCCATTTTTTCTTCAAAAACTGTAGACTGCGGCACCAAAGATGACTGC
GTGTGAGGGGCTAACGATGGCGTCACTGTGCTTGAGGGGAGGGGCTGTGC
TAGGAGGCCGTGCACGTGAGGAAGAGAGGGGCTAAGCTGACACGAGGGAG
AGACATGCTCACAAGGAAGAAACTGAGAGGGGCTGAGCTGAAGTTCTGCG
TCGTGTGGAGAGGGAGAAACGCGAGGCTGAGAGGTGAGGGGGAGAGGCGT
GGGAAACAACCGCTTCAAGTTTTAAATTAACAGCATCAAACTAACCCAAC
AAAACTAAAACAAATATTCTCATACTGGGTAAAGTTCCATCAAGTGCAGC
AAAGTAAAAAGCATACAAACAAAAATAAAGGCATTTAGAAAAGAGATGTT
CCCTTTCCCTTCTTGTCTCCACCAATTTCAAAGTGCTTGCACCTCTTGAT
GGGATGTTGAGACACATGCTTGCAACCCTGGCATTG
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