CN185969
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185969 vs. ExPASy Swiss-Prot
Match: RL2_BACC2 (50S ribosomal protein L2 OS=Bacillus cereus (strain G9842) GN=rplB PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 4.836e-34 Identity = 69/127 (54.33%), Postives = 94/127 (74.02%), Query Frame = 1 Query: 364 MRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRS 744 M M+ + + +IG+ +PL + +GT++HNIE+ PG+GG+LVR+AGTSA++L + + LVRL SG +L+ + CRA+IG V N H K+ KAG+SRWLG+RP VRG MNPVDHPHGGGEGRS Sbjct: 114 MEVMSGPEADIKIGNALPLINIPVGTVVHNIELKPGRGGQLVRSAGTSAQVLGKE-GKYVLVRLTSGEVRLVLSACRASIGQVGNEQHELIKIGKAGRSRWLGKRPTVRGSVMNPVDHPHGGGEGRS 239
BLAST of CN185969 vs. ExPASy Swiss-Prot
Match: RL2_BACWK (50S ribosomal protein L2 OS=Bacillus weihenstephanensis (strain KBAB4) GN=rplB PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 6.316e-34 Identity = 69/127 (54.33%), Postives = 94/127 (74.02%), Query Frame = 1 Query: 364 MRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRS 744 M M+ + + +IG+ +PL + +GT++HNIE+ PG+GG+LVR+AGTSA++L + + LVRL SG +L+ + CRA+IG V N H K+ KAG+SRWLG+RP VRG MNPVDHPHGGGEGRS Sbjct: 114 MEVMSGPESDIKIGNALPLINIPVGTVVHNIELKPGRGGQLVRSAGTSAQVLGKE-GKYVLVRLTSGEVRLVLSACRASIGQVGNEQHELIKIGKAGRSRWLGKRPTVRGSVMNPVDHPHGGGEGRS 239
BLAST of CN185969 vs. ExPASy Swiss-Prot
Match: RL2_NEOSM (50S ribosomal protein L2 OS=Neorickettsia sennetsu (strain Miyayama) GN=rplB PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 1.077e-33 Identity = 70/120 (58.33%), Postives = 90/120 (75.00%), Query Frame = 1 Query: 403 GSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNH 762 G+CMPL + +GT +HN+E+ PG GG+LVR+AG+SA+++ ++ LV LPSG ++LI + C ATIG VSN KL KAG+SRWLGRRP VRGVAMNPVDHP GGGEG++ S G H Sbjct: 132 GACMPLGKVPLGTTVHNVELKPGAGGQLVRSAGSSARVIARD-GNYTLVTLPSGEKRLILSTCHATIGAVSNADRKNTKLGKAGRSRWLGRRPSVRGVAMNPVDHPMGGGEGKT-SGGRH 249
BLAST of CN185969 vs. ExPASy Swiss-Prot
Match: RL2_MESSB (50S ribosomal protein L2 OS=Mesorhizobium sp. (strain BNC1) GN=rplB PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 1.077e-33 Identity = 68/143 (47.55%), Postives = 96/143 (67.13%), Query Frame = 1 Query: 334 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNH 762 P++ D+++ VD+ G+ MPLA M +GTI+HN+E+ PG+GG++ R+AG+ A+++ ++RL SG ++L+ C AT+G VSNP H L KAG+ RWLG+RP RGV MNPVDHPHGGGEGR+ S G H Sbjct: 107 PQRLAAGDRVISSAQSVDVKP--GNAMPLAAMPVGTIVHNVELKPGKGGQIARSAGSYAQLVGRD-QGMAILRLNSGEQRLVSGTCMATVGAVSNPDHANVSLGKAGRKRWLGKRPHNRGVTMNPVDHPHGGGEGRT-SGGRH 245
BLAST of CN185969 vs. ExPASy Swiss-Prot
Match: RL2_DICT6 (50S ribosomal protein L2 OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) GN=rplB PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 1.077e-33 Identity = 72/124 (58.06%), Postives = 93/124 (75.00%), Query Frame = 1 Query: 373 MAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRS 744 M+ +++ +IG+ +PL + GT+IHN+E+ PG+GG+LVRAAGT+A+IL + + VRLPSG +L D CRATIG VSN H L KAG+SRWLGRRP VRG AMNPVDHPHGGGEG++ Sbjct: 117 MSGENVDIKIGNNLPLKNIPDGTLIHNLELYPGRGGQLVRAAGTAAQILGKE-GKWAYVRLPSGEIRLFDLNCRATIGQVSNVDHQNVSLGKAGRSRWLGRRPHVRGSAMNPVDHPHGGGEGKA 239
BLAST of CN185969 vs. ExPASy Swiss-Prot
Match: RL2_MAGSM (50S ribosomal protein L2 OS=Magnetococcus sp. (strain MC-1) GN=rplB PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.407e-33 Identity = 68/151 (45.03%), Postives = 102/151 (67.55%), Query Frame = 1 Query: 310 GDPSKQEKPKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNH 762 G+ S P++ V D ++ +++ + G+CMPL M IGTIIHN+E+ PG+GG++ R+AG +++ + + +++PSG +L+ C AT+G VSNP + K+ KAG++RW+G+RP VRGV MNPVDHPHGGGEGR+ S G H Sbjct: 99 GEKSYILAPQRLQVGDTVVSAKTLDNVDVKPGNCMPLRVMPIGTIIHNVELKPGKGGQVARSAGNYIQLMGKE-GKYAQLKMPSGEMRLVLLECMATVGMVSNPDNSNTKIGKAGRTRWMGKRPSVRGVVMNPVDHPHGGGEGRT-SGGRH 247
BLAST of CN185969 vs. ExPASy Swiss-Prot
Match: RL2_DESPS (50S ribosomal protein L2 OS=Desulfotalea psychrophila GN=rplB PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.838e-33 Identity = 75/143 (52.45%), Postives = 103/143 (72.03%), Query Frame = 1 Query: 334 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNH 762 P+ +V DKI+ A +++ Q G+C+PLA + +GTIIHNIE+ G+G ++VR+AGTSA+++ + + LVRLPSG + CRA +G V N + ++KL KAG+SRWLG+RP VRGVAMNPVDHP GGGEG+S S G H Sbjct: 107 PEGVSVGDKIV---AGDNVDIQPGNCLPLANIPLGTIIHNIEMKIGKGAQIVRSAGTSAQLMAKE-GDYVLVRLPSGEVRKFHRLCRACVGQVGNREYESQKLGKAGRSRWLGKRPHVRGVAMNPVDHPMGGGEGKS-SGGRH 244
BLAST of CN185969 vs. ExPASy Swiss-Prot
Match: RL2_BRASB (50S ribosomal protein L2 OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=rplB PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.838e-33 Identity = 75/143 (52.45%), Postives = 98/143 (68.53%), Query Frame = 1 Query: 334 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNH 762 P++ V D I+ +VD+ G+ MPL M +GTI+HNIEV G+GG+L R+AGT A+I+ + +VRL SG ++L+ RCR TIG VSNP H + KAG+ RW+GRRP RGVAMNP+DHPHGGGEGR+ S G H Sbjct: 107 PQRLAVGDTIVAGN-YVDVKP--GNVMPLGNMPVGTIVHNIEVKIGKGGQLARSAGTYAQIVGRD-QDYVIVRLNSGEQRLVHGRCRGTIGAVSNPDHMNTSIGKAGRKRWMGRRPHNRGVAMNPIDHPHGGGEGRT-SGGRH 244
BLAST of CN185969 vs. ExPASy Swiss-Prot
Match: RL2_THEPX (50S ribosomal protein L2 OS=Thermoanaerobacter sp. (strain X514) GN=rplB PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.400e-33 Identity = 68/120 (56.67%), Postives = 92/120 (76.67%), Query Frame = 1 Query: 385 DINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRS 744 +++ ++G+ +PL + +GTIIHNIE+ PG+GG+LVRAAGT+A+++ + + VR+PSG +LI CRATIG VSN H K+ KAG+SRWLG RP VRG AMNPVDHPHGGGEG++ Sbjct: 121 NVDIKVGNALPLRNIPVGTIIHNIELIPGKGGQLVRAAGTAAQLMAKE-GDYVQVRMPSGEIRLIKADCRATIGQVSNLDHENVKIGKAGRSRWLGIRPTVRGSAMNPVDHPHGGGEGKA 239
BLAST of CN185969 vs. ExPASy Swiss-Prot
Match: RL2_THEP3 (50S ribosomal protein L2 OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=rplB PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.400e-33 Identity = 68/120 (56.67%), Postives = 92/120 (76.67%), Query Frame = 1 Query: 385 DINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRS 744 +++ ++G+ +PL + +GTIIHNIE+ PG+GG+LVRAAGT+A+++ + + VR+PSG +LI CRATIG VSN H K+ KAG+SRWLG RP VRG AMNPVDHPHGGGEG++ Sbjct: 121 NVDIKVGNALPLRNIPVGTIIHNIELIPGKGGQLVRAAGTAAQLMAKE-GDYVQVRMPSGEIRLIKADCRATIGQVSNLDHENVKIGKAGRSRWLGIRPTVRGSAMNPVDHPHGGGEGKA 239 The following BLAST results are available for this feature:
BLAST of CN185969 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN185969 ID=CN185969; Name=CN185969; organism=Citrus sinensis; type=EST; length=763bpback to top |