CN185969
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185969 vs. ExPASy Swiss-Prot
Match: RL2_RICRS (50S ribosomal protein L2 OS=Rickettsia rickettsii (strain Sheila Smith) GN=rplB PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.400e-33 Identity = 69/143 (48.25%), Postives = 101/143 (70.63%), Query Frame = 1 Query: 334 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNH 762 P+K +V D+++ D + +IG+C+PL C+ IGT +HN+E+ G+GG++ R+AGTS ++ + S + ++L SG +L+ C+ATIG++SNP L KAG++RWLG RP VRGVAMNPVDHPHGGGEG++ S G H Sbjct: 107 PQKLSVGDRVISSQ---DADIKIGNCLPLKCIPIGTTLHNVEMKVGKGGQIARSAGTSVDLVGKD-SGYAQIKLRSGEFRLVPLDCKATIGSISNPDQKNINLGKAGRNRWLGWRPHVRGVAMNPVDHPHGGGEGKT-SGGRH 244
BLAST of CN185969 vs. ExPASy Swiss-Prot
Match: RL2_RICRO (50S ribosomal protein L2 OS=Rickettsia rickettsii (strain Iowa) GN=rplB PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.400e-33 Identity = 69/143 (48.25%), Postives = 101/143 (70.63%), Query Frame = 1 Query: 334 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNH 762 P+K +V D+++ D + +IG+C+PL C+ IGT +HN+E+ G+GG++ R+AGTS ++ + S + ++L SG +L+ C+ATIG++SNP L KAG++RWLG RP VRGVAMNPVDHPHGGGEG++ S G H Sbjct: 107 PQKLSVGDRVISSQ---DADIKIGNCLPLKCIPIGTTLHNVEMKVGKGGQIARSAGTSVDLVGKD-SGYAQIKLRSGEFRLVPLDCKATIGSISNPDQKNINLGKAGRNRWLGWRPHVRGVAMNPVDHPHGGGEGKT-SGGRH 244
BLAST of CN185969 vs. ExPASy Swiss-Prot
Match: RL2_RICPU (50S ribosomal protein L2 OS=Rickettsia peacockii (strain Rustic) GN=rplB PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.400e-33 Identity = 69/143 (48.25%), Postives = 101/143 (70.63%), Query Frame = 1 Query: 334 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNH 762 P+K +V D+++ D + +IG+C+PL C+ IGT +HN+E+ G+GG++ R+AGTS ++ + S + ++L SG +L+ C+ATIG++SNP L KAG++RWLG RP VRGVAMNPVDHPHGGGEG++ S G H Sbjct: 107 PQKLSVGDRVISSQ---DADIKIGNCLPLKCIPIGTTLHNVEMKVGKGGQIARSAGTSVDLVGKD-SGYAQIKLRSGEFRLVPLDCKATIGSISNPDQKNINLGKAGRNRWLGWRPHVRGVAMNPVDHPHGGGEGKT-SGGRH 244
BLAST of CN185969 vs. ExPASy Swiss-Prot
Match: RL2_RICCN (50S ribosomal protein L2 OS=Rickettsia conorii GN=rplB PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.400e-33 Identity = 69/143 (48.25%), Postives = 101/143 (70.63%), Query Frame = 1 Query: 334 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNH 762 P+K +V D+++ D + +IG+C+PL C+ IGT +HN+E+ G+GG++ R+AGTS ++ + S + ++L SG +L+ C+ATIG++SNP L KAG++RWLG RP VRGVAMNPVDHPHGGGEG++ S G H Sbjct: 107 PQKLSVGDRVISSQ---DADIKIGNCLPLKCIPIGTTLHNVEMKVGKGGQIARSAGTSVDLVGKD-SGYAQIKLRSGEFRLVPLDCKATIGSISNPDQKNINLGKAGRNRWLGWRPHVRGVAMNPVDHPHGGGEGKT-SGGRH 244
BLAST of CN185969 vs. ExPASy Swiss-Prot
Match: RL2_RICAE (50S ribosomal protein L2 OS=Rickettsia africae (strain ESF-5) GN=rplB PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.400e-33 Identity = 69/143 (48.25%), Postives = 101/143 (70.63%), Query Frame = 1 Query: 334 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNH 762 P+K +V D+++ D + +IG+C+PL C+ IGT +HN+E+ G+GG++ R+AGTS ++ + S + ++L SG +L+ C+ATIG++SNP L KAG++RWLG RP VRGVAMNPVDHPHGGGEG++ S G H Sbjct: 107 PQKLSVGDRVISSQ---DADIKIGNCLPLKCIPIGTTLHNVEMKVGKGGQIARSAGTSVDLVGKD-SGYAQIKLRSGEFRLVPLDCKATIGSISNPDQKNINLGKAGRNRWLGWRPHVRGVAMNPVDHPHGGGEGKT-SGGRH 244
BLAST of CN185969 vs. ExPASy Swiss-Prot
Match: RL2_METSB (50S ribosomal protein L2 OS=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) GN=rplB PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.400e-33 Identity = 74/151 (49.01%), Postives = 102/151 (67.55%), Query Frame = 1 Query: 310 GDPSKQEKPKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNH 762 G+ S P++ +V D+++ D+ G+ MPLA M +GTI+HNIE+ G+GG +VR+AGT A+++ + ++RL SG ++LI +C AT+G VSNP H + KAG+SRWLGRRP RGV MNPVDHPHGGGEGR+ S G H Sbjct: 99 GEQSYIIAPQRLSVGDEVVSSQ-QADVKP--GNAMPLASMPVGTIVHNIEMKIGKGGAMVRSAGTFAQVVGRD-QGYVIIRLNSGEQRLIHGQCFATVGAVSNPDHMNASIGKAGRSRWLGRRPHNRGVTMNPVDHPHGGGEGRT-SGGRH 244
BLAST of CN185969 vs. ExPASy Swiss-Prot
Match: RL2_HYDS0 (50S ribosomal protein L2 OS=Hydrogenobaculum sp. (strain Y04AAS1) GN=rplB PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.400e-33 Identity = 71/120 (59.17%), Postives = 87/120 (72.50%), Query Frame = 1 Query: 403 GSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNH 762 G+ MPL + +GT IHNIE+NPG+G KLVRAAG SA+++ + + VRLPSG +LI+ +C ATIG V H KL KAG+SRWLG RP VRG AMNPVDHPHGGGEG++K G H Sbjct: 137 GNAMPLRFIPVGTFIHNIELNPGRGAKLVRAAGLSAQVIGK-IEGYAQVRLPSGEVRLINDKCMATIGVVGLAEHELVKLGKAGRSRWLGMRPNVRGTAMNPVDHPHGGGEGKTK--GKH 253
BLAST of CN185969 vs. ExPASy Swiss-Prot
Match: RL2_BRASO (50S ribosomal protein L2 OS=Bradyrhizobium sp. (strain ORS278) GN=rplB PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 4.094e-33 Identity = 74/143 (51.75%), Postives = 98/143 (68.53%), Query Frame = 1 Query: 334 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNH 762 P++ V D I+ +VD+ G+ MPL M +GTI+HNIEV G+GG+L R+AGT A+++ + +VRL SG ++L+ RCR TIG VSNP H + KAG+ RW+GRRP RGVAMNP+DHPHGGGEGR+ S G H Sbjct: 107 PQRLAVGDTIVAGN-YVDVKP--GNVMPLGNMPVGTIVHNIEVKIGKGGQLARSAGTYAQLVGRD-HDYVIVRLNSGEQRLVHGRCRGTIGAVSNPDHMNTSIGKAGRKRWMGRRPHNRGVAMNPIDHPHGGGEGRT-SGGRH 244
BLAST of CN185969 vs. ExPASy Swiss-Prot
Match: RL2_THETN (50S ribosomal protein L2 OS=Thermoanaerobacter tengcongensis GN=rplB PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 6.984e-33 Identity = 65/120 (54.17%), Postives = 92/120 (76.67%), Query Frame = 1 Query: 385 DINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRS 744 +++ ++G+ +PL + +GTI+HNIE+ PG+GG+LVRAAG +A+++ + + +R+PSG +LI+ CRATIG VSN H K+ KAG+SRWLG RP VRG AMNPVDHPHGGGEG++ Sbjct: 121 NVDIKVGNALPLRNIPVGTIVHNIELIPGKGGQLVRAAGAAAQLMAKE-GDYVHIRMPSGEIRLINANCRATIGQVSNIDHENVKIGKAGRSRWLGIRPTVRGSAMNPVDHPHGGGEGKA 239
BLAST of CN185969 vs. ExPASy Swiss-Prot
Match: RL2_CARHZ (50S ribosomal protein L2 OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=rplB PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 6.984e-33 Identity = 67/124 (54.03%), Postives = 92/124 (74.19%), Query Frame = 1 Query: 373 MAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRS 744 M+ D + ++G+ +PLA + +GT++HNIE+ PG+GG+LVRAAGT+A++L + + ++RLPSG + + CRATIG V N H + KAG++RWLG RP VRGV MNPVDHPHGGGEGRS Sbjct: 117 MSGPDADIKVGNALPLANIPVGTLVHNIELYPGKGGQLVRAAGTAAQLLGKE-GRYAILRLPSGEMRKVLLECRATIGQVGNLEHENITIGKAGRARWLGIRPTVRGVVMNPVDHPHGGGEGRS 239 The following BLAST results are available for this feature:
BLAST of CN185969 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185969 ID=CN185969; Name=CN185969; organism=Citrus sinensis; type=EST; length=763bpback to top |