CN185969
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185969 vs. ExPASy Swiss-Prot
Match: RL2_BARBK (50S ribosomal protein L2 OS=Bartonella bacilliformis (strain ATCC 35685 / KC583) GN=rplB1 PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 2.032e-32 Identity = 68/143 (47.55%), Postives = 98/143 (68.53%), Query Frame = 1 Query: 334 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNH 762 P++ V D ++ A + ++ + G+ MPL M +G I+HN+E+ PG+GG++ R+AG A+++ ++RL SG ++L+ + C AT+G VSNP HG KAG+SRW G+RP VRGVAMNPVDHPHGGGEGR+ S G H Sbjct: 107 PQRLDVGDTVV---AGLSVDVKPGNAMPLGNMPVGAIVHNVEMKPGKGGQIARSAGAYAQLVGRD-QGMAILRLNSGEQRLVSSNCFATVGAVSNPDHGNINDGKAGRSRWRGKRPHVRGVAMNPVDHPHGGGEGRT-SGGRH 244
BLAST of CN185969 vs. ExPASy Swiss-Prot
Match: RL2_STRSY (50S ribosomal protein L2 OS=Streptococcus suis (strain 05ZYH33) GN=rplB PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.654e-32 Identity = 65/116 (56.03%), Postives = 86/116 (74.14%), Query Frame = 1 Query: 397 QIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRS 744 ++G+ +PLA + +GT++HNIE+ PG+GG+LVRAAG SA++L + + LVRL SG ++I CRAT+GTV N HG L KAG+SRW G RP VRG MNP DHPHGGGEG++ Sbjct: 125 KVGNALPLANIPVGTVVHNIELKPGRGGELVRAAGASAQVLGQE-GKYVLVRLQSGEVRMILGTCRATVGTVGNEQHGLVNLGKAGRSRWKGIRPTVRGSVMNPNDHPHGGGEGKA 239
BLAST of CN185969 vs. ExPASy Swiss-Prot
Match: RL2_STRS2 (50S ribosomal protein L2 OS=Streptococcus suis (strain 98HAH33) GN=rplB PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.654e-32 Identity = 65/116 (56.03%), Postives = 86/116 (74.14%), Query Frame = 1 Query: 397 QIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRS 744 ++G+ +PLA + +GT++HNIE+ PG+GG+LVRAAG SA++L + + LVRL SG ++I CRAT+GTV N HG L KAG+SRW G RP VRG MNP DHPHGGGEG++ Sbjct: 125 KVGNALPLANIPVGTVVHNIELKPGRGGELVRAAGASAQVLGQE-GKYVLVRLQSGEVRMILGTCRATVGTVGNEQHGLVNLGKAGRSRWKGIRPTVRGSVMNPNDHPHGGGEGKA 239
BLAST of CN185969 vs. ExPASy Swiss-Prot
Match: RL2_RHORT (50S ribosomal protein L2 OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=rplB PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.654e-32 Identity = 67/120 (55.83%), Postives = 89/120 (74.17%), Query Frame = 1 Query: 403 GSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNH 762 G+ MPL M +GTIIHN+E+ PG+GG+L R+AG A+++ + + + +RL SG +L+ C AT+G VSNP + +KL KAG+SRW+GRRP VRGV MNPVDHPHGGGEGR+ S G H Sbjct: 127 GNAMPLKNMPVGTIIHNVEMKPGKGGQLARSAGCYAQLIGKD-AGYAQLRLSSGELRLVRGECLATVGAVSNPDNQNEKLGKAGRSRWMGRRPHVRGVVMNPVDHPHGGGEGRT-SGGRH 244
BLAST of CN185969 vs. ExPASy Swiss-Prot
Match: RL2_RHOPS (50S ribosomal protein L2 OS=Rhodopseudomonas palustris (strain BisB5) GN=rplB PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.654e-32 Identity = 71/143 (49.65%), Postives = 99/143 (69.23%), Query Frame = 1 Query: 334 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNH 762 P++ +V D ++ ++VD+ G+ MPL M +GTI+HNIE+ G+GG++ R+AGT A+++ + +VRL SG ++L+ RC ATIG VSNP H + KAG+ RWLGRRP RGV MNP+DHPHGGGEGR+ S G H Sbjct: 107 PQRLSVGDSVIAG-SYVDVKP--GNVMPLGNMPVGTIVHNIELKIGKGGQIARSAGTYAQLVGRD-HDYVIVRLNSGEQRLVHGRCTATIGAVSNPDHMNISIGKAGRKRWLGRRPHNRGVVMNPIDHPHGGGEGRT-SGGRH 244
BLAST of CN185969 vs. ExPASy Swiss-Prot
Match: RL2_PARUW (50S ribosomal protein L2 OS=Protochlamydia amoebophila (strain UWE25) GN=rplB PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.654e-32 Identity = 64/118 (54.24%), Postives = 84/118 (71.19%), Query Frame = 1 Query: 400 IGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSS 753 IG CM L M +G++IHNIE+ PG+GGKLVR+AG SA+++ + + +R+PSG ++I+ CRAT G VSNP + KAG+ RW G RP VRG AMNPVDHPHGGGEG+ K + Sbjct: 133 IGCCMKLRLMPLGSVIHNIELYPGKGGKLVRSAGLSAQLMAR-SGGYATIRMPSGEVRMINENCRATFGAVSNPERNLRVEGKAGRMRWKGIRPTVRGTAMNPVDHPHGGGEGKHKGN 249
BLAST of CN185969 vs. ExPASy Swiss-Prot
Match: RL2_PARL1 (50S ribosomal protein L2 OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=rplB PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.654e-32 Identity = 63/120 (52.50%), Postives = 88/120 (73.33%), Query Frame = 1 Query: 403 GSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNH 762 G+ MPLA + +GTI+HN+E+ PG+GG++ R+AGT +++ + L+RL SG ++++ C A+IG VSNP H + KAG++RWLG+RP VRGV MNPVDHPHGGGEGR+ S G H Sbjct: 127 GNAMPLANIPVGTIVHNVEMKPGKGGQIARSAGTYVQLVGRD-QGYALLRLSSGEQRMVPATCMASIGAVSNPDHSNITIAKAGRNRWLGKRPHVRGVVMNPVDHPHGGGEGRT-SGGRH 244
BLAST of CN185969 vs. ExPASy Swiss-Prot
Match: RL2_BARQU (50S ribosomal protein L2 OS=Bartonella quintana GN=rplB PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.654e-32 Identity = 71/143 (49.65%), Postives = 98/143 (68.53%), Query Frame = 1 Query: 334 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNH 762 P++ V D I+ A +++ + G+ MPL M +GTIIHN+E+ PG+GG++ R+AGT A+++ ++RL SG ++L+ C AT+G VSNP H KAG+SRW G+RP VRGVAMNPVDHPHGGGEGR+ S G H Sbjct: 107 PQRLDVGDSII---AGSNVDVKPGNAMPLGNMPVGTIIHNVEMKPGKGGQIARSAGTYAQLVGRG-QGMVILRLNSGEQRLVSGSCFATVGAVSNPDHANINDGKAGRSRWRGKRPHVRGVAMNPVDHPHGGGEGRT-SGGRH 244
BLAST of CN185969 vs. ExPASy Swiss-Prot
Match: RL2_PELUB (50S ribosomal protein L2 OS=Pelagibacter ubique GN=rplB PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 3.466e-32 Identity = 70/143 (48.95%), Postives = 95/143 (66.43%), Query Frame = 1 Query: 334 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRSKSSGNH 762 P+K V DK+ + ++G+CMPL + +G IHN+E+ PG GGK+ R+AGTS I ++ L+++ SG + ID+RC ATIG +SNP K+ KAG+SRWLGRRP RGV MNPVDHPHGGGEG++ + G H Sbjct: 108 PQKIKVGDKVENGS---EKEIKVGNCMPLRDIPVGINIHNVELKPGAGGKIARSAGTSVTI-SGLDGNYSLIKMTSGEVRKIDSRCMATIGVLSNPDQKNIKIGKAGRSRWLGRRPHTRGVVMNPVDHPHGGGEGKT-AGGRH 245
BLAST of CN185969 vs. ExPASy Swiss-Prot
Match: RL2_SULSY (50S ribosomal protein L2 OS=Sulfurihydrogenibium sp. (strain YO3AOP1) GN=rplB PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 4.527e-32 Identity = 67/124 (54.03%), Postives = 87/124 (70.16%), Query Frame = 1 Query: 373 MAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGRS 744 MA D ++G+ +PL + +GT++HNIE+ PG+GG+LVRAAG SA+IL + +RLPSG +L+ +C ATIG V H +L KAG+SRWLG RP VRG AMNP DHPHGGGEGR+ Sbjct: 117 MAGPDAEIKVGNALPLENIPVGTLVHNIELTPGKGGQLVRAAGMSAQILGRE-GDYVQIRLPSGELRLVYKKCMATIGAVGLAEHELLELGKAGRSRWLGIRPTVRGTAMNPADHPHGGGEGRT 239 The following BLAST results are available for this feature:
BLAST of CN185969 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185969 ID=CN185969; Name=CN185969; organism=Citrus sinensis; type=EST; length=763bpback to top |