CN185965

Overview
NameCN185965
Unique NameCN185965
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length753
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185965 vs. ExPASy Swiss-Prot
Match: FTHFD_XENLA (10-formyltetrahydrofolate dehydrogenase OS=Xenopus laevis GN=aldh1l1 PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.195e-37
Identity = 77/180 (42.78%), Postives = 113/180 (62.78%), Query Frame = -3
Query:  215 IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGAPLLTXXXXXXXXXXXIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK--TVEEAIKSANNTRHGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 748
            I+DEF K++VE+ K   +GDP D +   GPQ  K   D+++ Y + G +EG  L+             EPTIFT+VT++M IAK E FGPVM + KF    ++  +K AN++  GLA+G+ TKD+N A  VS  ++AG +++N Y   D   P+GG+K SGFG+D G E+L+ YL+ K+V
Sbjct:  719 IHDEFVKRVVEEVKKMKIGDPLDRSTDHGPQNHKAHLDKLIEYCQTGVKEGGKLVYGGKQVERPGFFFEPTIFTDVTDEMFIAKEESFGPVMIISKFNDGDIDGVLKRANDSEFGLASGVFTKDINKALYVSEKLQAGTVFVNTYNKTDVAAPFGGFKQSGFGKDLGEEALNEYLKTKAV 898          
BLAST of CN185965 vs. ExPASy Swiss-Prot
Match: CROM_OMMSL (Omega-crystallin OS=Ommastrephes sloanei PE=2 SV=3)

HSP 1 Score: 155.992 bits (393), Expect = 2.038e-37
Identity = 73/179 (40.78%), Postives = 113/179 (63.13%), Query Frame = -3
Query:  212 IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGAPLLTXXXXXXXXXXXIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRHGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVV 748
            IYDEF K+ VEKA +   GDP++     GPQ+D++Q+ +I+ +I+ GK +GA L             +EPT+F++VT++M  ++ EIFGPV  +MKFK ++E I   NNT +G+AA I T D+N + T + ++  G +W+N Y  +    P+GGYK SG  R+ G  +L  Y +VK++V
Sbjct:  309 IYDEFVKRAVEKATSRKTGDPYEMDTEHGPQIDEEQYKKIMEFIKKGKDKGAQLKCGGNRHGDKGFYVEPTVFSDVTDEMKFSQEEIFGPVQLIMKFKDMDEVIDRCNNTDYGMAAAIFTNDINRSITFTHAMYCGTVWVNTYNHWFPQAPFGGYKKSGLYREMGKYTLQEYTEVKNIV 487          
BLAST of CN185965 vs. ExPASy Swiss-Prot
Match: BETB_OCHA4 (Betaine aldehyde dehydrogenase OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=betB PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 2.038e-37
Identity = 81/180 (45.00%), Postives = 113/180 (62.78%), Query Frame = -3
Query:  215 DEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGAPLL----TXXXXXXXXXXXIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRHGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 742
            + F ++LVE+ +   +GDP D A + GP V++ Q D++LSYIE GK EGA L                 IEPTIFT+VT+DM IA+ EIFGPVM++++F   +E I  AN+T  GLAAG+ T D+   + V   I+AG  WIN Y     + P+GGYK SG GR+ G+ +L +Y Q+K+V
Sbjct:  297 ERFVERLVERTRKIRIGDPLDEATQMGPLVNRAQRDKVLSYIEKGKAEGATLACGGGVPKLQGFDKGYFIEPTIFTDVTDDMTIAREEIFGPVMSVLEFSDEDEVIARANDTEFGLAAGVFTADIARGHRVIGQIKAGTCWINAYNLTPVEVPFGGYKQSGIGRENGIAALAHYSQIKTV 476          
BLAST of CN185965 vs. ExPASy Swiss-Prot
Match: BETB_RHOS5 (Betaine aldehyde dehydrogenase OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=betB PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.662e-37
Identity = 79/179 (44.13%), Postives = 110/179 (61.45%), Query Frame = -3
Query:  215 GIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGAPLLTXXXXXXXXXXXIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRHGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 751
            GI + F  +L E+A A  +GDP DP V+ GP V   Q +++LSYIE  + EG  L+            ++PT+F +VT+ M +A+ E+FGPVMA++ F+T EE I  AN T  GLAAG+ T DL  A+ V   ++AG  WIN Y     + P+GG KMSG GR+ G  ++ +Y QVKSV
Sbjct:  294 GIKEAFLARLAERADAIQMGDPLDPEVQMGPLVSPAQLEKVLSYIEKARAEGGRLVCGGEASVSPGCYVQPTVFADVTDGMTLAREEVFGPVMAVLDFETEEEVIARANATDFGLAAGVFTADLTRAHRVVAQLQAGTCWINAYNLTPVEAPFGGVKMSGVGRENGRAAVEHYTQVKSV 472          
BLAST of CN185965 vs. ExPASy Swiss-Prot
Match: BETB_RHOS4 (Betaine aldehyde dehydrogenase OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=betB PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.540e-37
Identity = 78/179 (43.58%), Postives = 112/179 (62.57%), Query Frame = -3
Query:  215 GIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGAPLLTXXXXXXXXXXXIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRHGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 751
            GI + F  +L E+A A  +GDP DP V+ GP V + Q +++L+YIE  + EG  L+            ++PT+F +VT+ M +A+ E+FGPVMA++ F+T EEAI  AN T  GLAAG+ T DL  A+ V   ++AG  WIN Y     + P+GG K+SG GR+ G  ++ +Y QVKSV
Sbjct:  294 GIKEAFLARLAERADAIRMGDPLDPEVQMGPLVSQAQLEKVLAYIEKARAEGGRLVCGGEASVSPGCYVQPTVFADVTDAMTLAREEVFGPVMAVLDFETEEEAIARANATDFGLAAGVFTADLTRAHRVVAQLQAGTCWINAYNLTPVEAPFGGVKLSGVGRENGRAAVQHYTQVKSV 472          
BLAST of CN185965 vs. ExPASy Swiss-Prot
Match: BETB_RHOS1 (Betaine aldehyde dehydrogenase OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=betB PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.540e-37
Identity = 78/179 (43.58%), Postives = 112/179 (62.57%), Query Frame = -3
Query:  215 GIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGAPLLTXXXXXXXXXXXIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRHGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 751
            GI + F  +L E+A A  +GDP DP V+ GP V + Q +++L+YIE  + EG  L+            ++PT+F +VT+ M +A+ E+FGPVMA++ F+T EEAI  AN T  GLAAG+ T DL  A+ V   ++AG  WIN Y     + P+GG K+SG GR+ G  ++ +Y QVKSV
Sbjct:  294 GIKEAFLARLAERADAIRMGDPLDPEVQMGPLVSQAQLEKVLAYIEKARAEGGRLVCGGEASVSPGCYVQPTVFADVTDAMTLAREEVFGPVMAVLDFETEEEAIARANATDFGLAAGVFTADLTRAHRVVAQLQAGTCWINAYNLTPVEAPFGGVKLSGVGRENGRAAVEHYTQVKSV 472          
BLAST of CN185965 vs. ExPASy Swiss-Prot
Match: ALDH4_BACSU (Putative aldehyde dehydrogenase dhaS OS=Bacillus subtilis GN=dhaS PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 7.744e-37
Identity = 74/177 (41.81%), Postives = 113/177 (63.84%), Query Frame = -3
Query:  215 YDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGAPLLTXXXXXXXXXXXIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRHGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSV 745
            YDE   ++   A++   G       + GP V K+Q +R+LSYI+ GK EGA  +T           + PT+F NV ++M IAK EIFGPV+  + ++TV+E I+ AN++ +GLAAG+ T+++  A+ ++  ++AG +W+NCY  FD+  P+GGYK SG GR+ G  +L NY +VKSV
Sbjct:  313 YDEVVDEMASYAESLRQGAGLHKDTQIGPLVSKEQHERVLSYIQKGKDEGAKAVTGGSCPFEAGYFVAPTVFANVEDEMTIAKEEIFGPVLTAIPYETVDEVIERANHSEYGLAAGLWTENVKQAHYIADRLQAGTVWVNCYNVFDAASPFGGYKQSGLGREMGSYALDNYTEVKSV 489          
BLAST of CN185965 vs. ExPASy Swiss-Prot
Match: BETB_YERPY (Betaine aldehyde dehydrogenase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=betB PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.321e-36
Identity = 78/182 (42.86%), Postives = 115/182 (63.19%), Query Frame = -3
Query:  203 FEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGAPLL----TXXXXXXXXXXXIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRHGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPL 736
            FE+K+VE+ K   +GDP D  V  GP V  +  D ++ YI+ GKREGA LL    +           + PT+FT+  +DM I + EIFGPVM+++ +++ EE I+ AN+T +GLAAG++T+DLN A+ V   ++AGI WIN +     + P GGYK SG GR+ G+ +L +Y Q+KS+   L
Sbjct:  302 FEQKIVERVKRIHIGDPSDERVNFGPLVSFQHRDSVMRYIDSGKREGATLLIGGCSLTEGALAHGAYVAPTVFTHCRDDMQIVREEIFGPVMSILSYQSEEEVIRRANDTEYGLAAGVVTQDLNRAHRVIHQLQAGICWINTWGESAPEMPVGGYKHSGVGRENGISTLEHYTQIKSIQVEL 483          
BLAST of CN185965 vs. ExPASy Swiss-Prot
Match: BETB_YERPS (Betaine aldehyde dehydrogenase OS=Yersinia pseudotuberculosis GN=betB PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.321e-36
Identity = 78/183 (42.62%), Postives = 115/183 (62.84%), Query Frame = -3
Query:  200 FEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGAPLL----TXXXXXXXXXXXIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRHGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPLS 736
            FE+K+VE+ K   +GDP D     GP V  +  D ++ YI+ GKREGA LL    +           + PT+FT+  +DM I + EIFGPVM+++ +++ EE I+ AN+T +GLAAG++T+DLN A+ V   ++AGI WIN +     + P GGYK SG GR+ G+ +L +Y Q+KS+   LS
Sbjct:  302 FEQKIVERVKRIHIGDPSDERTNFGPLVSFQHRDSVMRYIDSGKREGATLLIGGYSLTEGALAHGAYVAPTVFTHCRDDMQIVREEIFGPVMSILSYQSEEEVIRRANDTEYGLAAGVVTQDLNRAHRVIHQLQAGICWINTWGESAPEMPVGGYKHSGVGRENGISTLEHYTQIKSIQVELS 484          
BLAST of CN185965 vs. ExPASy Swiss-Prot
Match: BETB_YERPB (Betaine aldehyde dehydrogenase OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=betB PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.321e-36
Identity = 78/183 (42.62%), Postives = 115/183 (62.84%), Query Frame = -3
Query:  200 FEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGAPLL----TXXXXXXXXXXXIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKTVEEAIKSANNTRHGLAAGIMTKDLNVANTVSRSIRAGIIWINCYFAFDSDCPYGGYKMSGFGRDCGLESLHNYLQVKSVVTPLS 736
            FE+K+VE+ K   +GDP D     GP V  +  D ++ YI+ GKREGA LL    +           + PT+FT+  +DM I + EIFGPVM+++ +++ EE I+ AN+T +GLAAG++T+DLN A+ V   ++AGI WIN +     + P GGYK SG GR+ G+ +L +Y Q+KS+   LS
Sbjct:  302 FEQKIVERVKRIHIGDPSDERTNFGPLVSFQHRDSVMRYIDSGKREGATLLIGGYSLTEGALAHGAYVAPTVFTHCRDDMQIVREEIFGPVMSILSYQSEEEVIRRANDTEYGLAAGVVTQDLNRAHRVIHQLQAGICWINTWGESAPEMPVGGYKHSGVGRENGISTLEHYTQIKSIQVELS 484          
The following BLAST results are available for this feature:
BLAST of CN185965 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 428
Match NameE-valueIdentityDescription
FTHFD_XENLA1.195e-3742.7810-formyltetrahydrofolate dehydrogenase OS=Xenopus... [more]
CROM_OMMSL2.038e-3740.78Omega-crystallin OS=Ommastrephes sloanei PE=2 SV=3[more]
BETB_OCHA42.038e-3745.00Betaine aldehyde dehydrogenase OS=Ochrobactrum ant... [more]
BETB_RHOS52.662e-3744.13Betaine aldehyde dehydrogenase OS=Rhodobacter spha... [more]
BETB_RHOS44.540e-3743.58Betaine aldehyde dehydrogenase OS=Rhodobacter spha... [more]
BETB_RHOS14.540e-3743.58Betaine aldehyde dehydrogenase OS=Rhodobacter spha... [more]
ALDH4_BACSU7.744e-3741.81Putative aldehyde dehydrogenase dhaS OS=Bacillus s... [more]
BETB_YERPY1.321e-3642.86Betaine aldehyde dehydrogenase OS=Yersinia pseudot... [more]
BETB_YERPS1.321e-3642.62Betaine aldehyde dehydrogenase OS=Yersinia pseudot... [more]
BETB_YERPB1.321e-3642.62Betaine aldehyde dehydrogenase OS=Yersinia pseudot... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002C10_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185965 ID=CN185965; Name=CN185965; organism=Citrus sinensis; type=EST; length=753bp
TTTTTTTTTTTTTTTTTAAATATCAATGTAGTATTAATATTATTCCCTTT
AGAGGTAATACAAAAACCCTTGTATCTTATGAGAGCCCTTTAATGAGAAT
AATTTGCAAACCCCAAACTCAGAAAGTCTTGCAACTTTAATCAGCCACCA
CTTATTTTTTCAAACCTGGGTGGGTAAGTGTTCACAGCCAAGGAGAATGG
GAAAGGGGAGTCACAACGGACTTGACCTGCAAATAGTTATGTAGAGATTC
CAGTCCACAGTCTCTACCAAATCCACTCATCTTGTATCCTCCGTAAGGGC
AGTCGCTGTCAAAAGCAAAATAACAATTGATCCATATAATGCCTGCTCGA
ATTGATCTAGAGACGGTATTAGCCACATTCAAGTCCTTTGTCATAATGCC
TGCTGCTAGGCCATGTCGGGTATTATTTGCACTCTTAATTGCCTCCTCAA
CAGTCTTGAATTTCATCAATGCCATCACAGGTCCGAAAATTTCATTCTTT
GCTATCAGCATGTCTTCCGTAACATTTGTGAAAATTGTAGGCTCAATATA
ATACCCCTTCTTGCCGATAGGCTTACCCCCTGTTAACAATGGGGCTCCTT
CCCTCTTGCCATGCTCAATGTACGAAAGAATTCTATCGAACTGCTTCTTA
TCGACCTGGGGTCCTTGACGAACTGCAGGATCAAAAGGATCACCAACTAC
CCAAGCTTTTGCCTTTTCGACCAACTTCTTTTCAAATTCATCATAAATTC
CTT
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