EG358208

Overview
NameEG358208
Unique NameEG358208
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length842
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EG358208 vs. ExPASy Swiss-Prot
Match: CAPP_SHIDS (Phosphoenolpyruvate carboxylase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=ppc PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 3.904e-32
Identity = 63/155 (40.65%), Postives = 93/155 (60.00%), Query Frame = 1
Query:  205 LSAA*KLYNAQE*LVKVAKQYGVKLTMFHXXXXXXXXXXXPTHLAILSQPPDTIHGSLRVTVQGEVIEQSFGEEHLCFRTLQRFSAATLEHGMHPPVSPKPEWRALMDEMAVIATKEYRSIVFQEPRFVEYFRLATPEMEYGRMNIGSRPSNRKP 669
            ++A+   Y AQ+ L+K  ++ G++LT+FH           P H A+LSQPP ++ G LRVT QGE+I   +G   +   +L  ++ A LE  + PP   K  WR +MDE++VI+   YR  V +   FV YFR ATPE E G++ +GSRP+ R+P
Sbjct:  551 MAASWAQYQAQDALIKTCEKAGIELTLFHGRGGSIGRGGAPAHAALLSQPPGSLKGGLRVTEQGEMIRFKYGLPEITVSSLSLYTGAILEANLLPPPELKESWRRIMDELSVISCDLYRGYVRENKDFVPYFRSATPEQELGKLPLGSRPAKRRP 705          

HSP 2 Score: 31.9574 bits (71), Expect = 3.904e-32
Identity = 12/19 (63.16%), Postives = 16/19 (84.21%), Query Frame = 2
Query:  671 SGGIESVRAIPWIFTCTHD 727
            +GG+ES+RAIPWIF  T +
Sbjct:  706 TGGVESLRAIPWIFAWTQN 724          
BLAST of EG358208 vs. ExPASy Swiss-Prot
Match: CAPP_HAEIE (Phosphoenolpyruvate carboxylase OS=Haemophilus influenzae (strain PittEE) GN=ppc PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 5.084e-32
Identity = 64/155 (41.29%), Postives = 92/155 (59.35%), Query Frame = 1
Query:  205 LSAA*KLYNAQE*LVKVAKQYGVKLTMFHXXXXXXXXXXXPTHLAILSQPPDTIHGSLRVTVQGEVIEQSFGEEHLCFRTLQRFSAATLEHGMHPPVSPKPEWRALMDEMAVIATKEYRSIVFQEPRFVEYFRLATPEMEYGRMNIGSRPSNRKP 669
            ++A+   Y AQE LV + ++ G++LT+FH           P H A+LSQPP ++   LRVT QGE+I    G   +   T   +++A LE  + PP  PKPEWR +MDE++ I+   YR +V  +  FV YFR ATPE E  ++ +GSRP+ R P
Sbjct:  550 MAASWAQYRAQEALVNLTEKLGIELTLFHGRGGTIGRGGAPAHAALLSQPPRSLKNGLRVTEQGEMIRFKLGLPTVAVETFDLYASAILEANLLPPPEPKPEWRNIMDELSTISCDIYRGVVRGDKDFVPYFRSATPEQELSKLPLGSRPAKRNP 704          

HSP 2 Score: 30.4166 bits (67), Expect = 5.084e-32
Identity = 11/14 (78.57%), Postives = 14/14 (100.00%), Query Frame = 2
Query:  671 SGGIESVRAIPWIF 712
            +GG+ES+RAIPWIF
Sbjct:  705 NGGVESLRAIPWIF 718          
BLAST of EG358208 vs. ExPASy Swiss-Prot
Match: CAPP4_ARATH (Phosphoenolpyruvate carboxylase 4 OS=Arabidopsis thaliana GN=PPC4 PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 8.604e-32
Identity = 67/154 (43.51%), Postives = 97/154 (62.99%), Query Frame = 1
Query:  208 SAA*KLYNAQE*LVKVAKQYGVKLTMFHXXXXXXXXXXXPTHLAILSQPPDTIHGSLRVTVQGEVIEQSFGEEHLCFRTLQRFSAATLEHGMHPPVSPKPE-WRALMDEMAVIATKEYRSIVFQEPRFVEYFRLATPEMEYGRMNIGSRPSNRK 666
            +AA +LY AQE +V    ++G+K+T+FH           PT+LAI SQPP ++ GSLR T QGE+++  FG      R L+ ++ A L   + PP  P+ E WR LM+E++ I+ + YRS V++ P F+ YF  ATP+ E G +NIGSRP+ RK
Sbjct:  705 TAAWELYKAQENVVAACNEFGIKITLFHGRGGSIGRGGGPTYLAIQSQPPGSVMGSLRSTEQGEMVQAKFGIPQTAVRQLEVYTTAVLLATLKPPQPPREEKWRNLMEEISGISCQHYRSTVYENPEFLSYFHEATPQAELGFLNIGSRPTRRK 858          

HSP 2 Score: 25.7942 bits (55), Expect = 8.604e-32
Identity = 10/17 (58.82%), Postives = 12/17 (70.59%), Query Frame = 2
Query:  671 SGGIESVRAIPWIFTCT 721
            S GI  +RAIPW+F  T
Sbjct:  860 SSGIGHLRAIPWVFAWT 876          
BLAST of EG358208 vs. ExPASy Swiss-Prot
Match: CAPP_VIBFM (Phosphoenolpyruvate carboxylase OS=Vibrio fischeri (strain MJ11) GN=ppc PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 8.621e-32
Identity = 63/155 (40.65%), Postives = 94/155 (60.65%), Query Frame = 1
Query:  205 LSAA*KLYNAQE*LVKVAKQYGVKLTMFHXXXXXXXXXXXPTHLAILSQPPDTIHGSLRVTVQGEVIEQSFGEEHLCFRTLQRFSAATLEHGMHPPVSPKPEWRALMDEMAVIATKEYRSIVFQEPRFVEYFRLATPEMEYGRMNIGSRPSNRKP 669
            +SA    Y+A E LV+V ++  ++LT+FH           P H A+LSQPP ++ G LRVT QGE+I    G   +   +   +++A LE  + PP  PK EWR LM+ ++ ++ + YR++V  E  FV YFR ATPE+E G++ +GSRP+ R P
Sbjct:  548 MSAGWAQYSAMEALVEVCEKESIELTLFHGRGGTIGRGGAPAHAALLSQPPKSLKGGLRVTEQGEMIRFKLGLPEVAVNSFNLYASAILEANLLPPPEPKQEWRDLMEVLSEVSCEAYRNVVRGEKDFVPYFRAATPELELGKLPLGSRPAKRNP 702          

HSP 2 Score: 30.8018 bits (68), Expect = 8.621e-32
Identity = 11/15 (73.33%), Postives = 15/15 (100.00%), Query Frame = 2
Query:  671 SGGIESVRAIPWIFT 715
            +GG+ES+RAIPWIF+
Sbjct:  703 NGGVESLRAIPWIFS 717          
BLAST of EG358208 vs. ExPASy Swiss-Prot
Match: CAPP_VIBF1 (Phosphoenolpyruvate carboxylase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=ppc PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 8.621e-32
Identity = 63/155 (40.65%), Postives = 94/155 (60.65%), Query Frame = 1
Query:  205 LSAA*KLYNAQE*LVKVAKQYGVKLTMFHXXXXXXXXXXXPTHLAILSQPPDTIHGSLRVTVQGEVIEQSFGEEHLCFRTLQRFSAATLEHGMHPPVSPKPEWRALMDEMAVIATKEYRSIVFQEPRFVEYFRLATPEMEYGRMNIGSRPSNRKP 669
            +SA    Y+A E LV+V ++  ++LT+FH           P H A+LSQPP ++ G LRVT QGE+I    G   +   +   +++A LE  + PP  PK EWR LM+ ++ ++ + YR++V  E  FV YFR ATPE+E G++ +GSRP+ R P
Sbjct:  548 MSAGWAQYSAMEALVEVCEKESIELTLFHGRGGTIGRGGAPAHAALLSQPPKSLKGGLRVTEQGEMIRFKLGLPEVAVNSFNLYASAILEANLLPPPEPKQEWRDLMEVLSEVSCEAYRNVVRGEKDFVPYFRAATPELELGKLPLGSRPAKRNP 702          

HSP 2 Score: 30.8018 bits (68), Expect = 8.621e-32
Identity = 11/15 (73.33%), Postives = 15/15 (100.00%), Query Frame = 2
Query:  671 SGGIESVRAIPWIFT 715
            +GG+ES+RAIPWIF+
Sbjct:  703 NGGVESLRAIPWIFS 717          
BLAST of EG358208 vs. ExPASy Swiss-Prot
Match: CAPP_ALISL (Phosphoenolpyruvate carboxylase OS=Aliivibrio salmonicida (strain LFI1238) GN=ppc PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 1.123e-31
Identity = 64/155 (41.29%), Postives = 93/155 (60.00%), Query Frame = 1
Query:  205 LSAA*KLYNAQE*LVKVAKQYGVKLTMFHXXXXXXXXXXXPTHLAILSQPPDTIHGSLRVTVQGEVIEQSFGEEHLCFRTLQRFSAATLEHGMHPPVSPKPEWRALMDEMAVIATKEYRSIVFQEPRFVEYFRLATPEMEYGRMNIGSRPSNRKP 669
            +SA    Y+A E LV V ++  ++LT+FH           P H A+LSQPP ++ G LRVT QGE+I    G   +   +   +++A LE  + PP  PK EWR LM+ ++ ++ + YR+IV  E  FV YFR ATPE+E G++ +GSRP+ R P
Sbjct:  548 MSAGWAQYSAMEALVDVCEKESIELTLFHGRGGTIGRGGAPAHAALLSQPPKSLKGGLRVTEQGEMIRFKLGLPEVAVNSFNLYASAILEANLLPPPEPKQEWRDLMEVLSEVSCEAYRNIVRGEKDFVPYFRAATPELELGKLPLGSRPAKRNP 702          

HSP 2 Score: 30.8018 bits (68), Expect = 1.123e-31
Identity = 11/15 (73.33%), Postives = 15/15 (100.00%), Query Frame = 2
Query:  671 SGGIESVRAIPWIFT 715
            +GG+ES+RAIPWIF+
Sbjct:  703 NGGVESLRAIPWIFS 717          
BLAST of EG358208 vs. ExPASy Swiss-Prot
Match: CAPP_ERWT9 (Phosphoenolpyruvate carboxylase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=ppc PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.462e-31
Identity = 60/155 (38.71%), Postives = 91/155 (58.71%), Query Frame = 1
Query:  205 LSAA*KLYNAQE*LVKVAKQYGVKLTMFHXXXXXXXXXXXPTHLAILSQPPDTIHGSLRVTVQGEVIEQSFGEEHLCFRTLQRFSAATLEHGMHPPVSPKPEWRALMDEMAVIATKEYRSIVFQEPRFVEYFRLATPEMEYGRMNIGSRPSNRKP 669
            ++A+   Y AQ+ L+K  ++ G+ LT+FH           P H A+LSQPP ++ G LRVT QGE+I   +G   +   +L  ++ A LE  + PP  PK EW  +M+ ++ ++ K YR  V +   FV YFR ATPE E  ++ +GSRP+ R+P
Sbjct:  551 MAASWAQYQAQDALIKTCEKAGITLTLFHGRGGSIGRGGAPAHAALLSQPPGSLKGGLRVTEQGEMIRFKYGLPEVTISSLSLYTGAILEANLLPPPEPKTEWIGIMERLSAVSCKMYRGYVREHAEFVPYFRSATPEQELAKLPLGSRPAKRRP 705          

HSP 2 Score: 31.9574 bits (71), Expect = 1.462e-31
Identity = 12/19 (63.16%), Postives = 16/19 (84.21%), Query Frame = 2
Query:  671 SGGIESVRAIPWIFTCTHD 727
            +GG+ES+RAIPWIF  T +
Sbjct:  706 TGGVESLRAIPWIFAWTQN 724          
BLAST of EG358208 vs. ExPASy Swiss-Prot
Match: CAPP_PHOPR (Phosphoenolpyruvate carboxylase OS=Photobacterium profundum GN=ppc PE=3 SV=2)

HSP 1 Score: 127.487 bits (319), Expect = 1.462e-31
Identity = 63/148 (42.57%), Postives = 90/148 (60.81%), Query Frame = 1
Query:  226 YNAQE*LVKVAKQYGVKLTMFHXXXXXXXXXXXPTHLAILSQPPDTIHGSLRVTVQGEVIEQSFGEEHLCFRTLQRFSAATLEHGMHPPVSPKPEWRALMDEMAVIATKEYRSIVFQEPRFVEYFRLATPEMEYGRMNIGSRPSNRKP 669
            Y A E LV+V +   V+LT+FH           P H A+LSQPP ++ G LRVT QGE+I    G   +   +L  +++ATLE  + PP +PK EW  LMD ++ ++ + YR++V     FV YFR ATPE+E G++ +GSRP+ R P
Sbjct:  555 YRAMEELVEVCEDASVELTLFHGRGGSIGRGGAPAHAALLSQPPRSLKGGLRVTEQGEMIRFKLGLPDVAVNSLSLYASATLEANLLPPPAPKKEWCDLMDVLSEVSCESYRNVVRGSEEFVPYFRAATPELELGKLPLGSRPAKRNP 702          

HSP 2 Score: 30.4166 bits (67), Expect = 1.462e-31
Identity = 11/14 (78.57%), Postives = 14/14 (100.00%), Query Frame = 2
Query:  671 SGGIESVRAIPWIF 712
            +GG+ES+RAIPWIF
Sbjct:  703 NGGVESLRAIPWIF 716          
BLAST of EG358208 vs. ExPASy Swiss-Prot
Match: CAPP_PROMH (Phosphoenolpyruvate carboxylase OS=Proteus mirabilis (strain HI4320) GN=ppc PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 7.126e-31
Identity = 63/155 (40.65%), Postives = 92/155 (59.35%), Query Frame = 1
Query:  205 LSAA*KLYNAQE*LVKVAKQYGVKLTMFHXXXXXXXXXXXPTHLAILSQPPDTIHGSLRVTVQGEVIEQSFGEEHLCFRTLQRFSAATLEHGMHPPVSPKPEWRALMDEMAVIATKEYRSIVFQEPRFVEYFRLATPEMEYGRMNIGSRPSNRKP 669
            ++A+   Y AQ+ L+K+ ++ GV LT+FH           P H A+LSQPP ++ G LRVT QGE+I   FG   +   +L  ++ A LE  + PP  PK  W  +MD ++ ++ + YR  V  E  FV YFR ATPE E G++ +GSRP+ R+P
Sbjct:  550 MAASWAQYRAQDALIKLCEKSGVTLTLFHGRGGTIGRGGAPAHAALLSQPPGSLKGGLRVTEQGEMIRFKFGLPQVTISSLAHYAGAILEANLLPPPEPKTAWIEVMDALSDVSCEMYRGYVRGEKDFVPYFRAATPEGELGKLPLGSRPAKRRP 704          

HSP 2 Score: 30.8018 bits (68), Expect = 7.126e-31
Identity = 11/19 (57.89%), Postives = 16/19 (84.21%), Query Frame = 2
Query:  671 SGGIESVRAIPWIFTCTHD 727
            +GG+E++RAIPWIF  T +
Sbjct:  705 TGGVETLRAIPWIFAWTQN 723          
BLAST of EG358208 vs. ExPASy Swiss-Prot
Match: CAPP2_CHLRE (Phosphoenolpyruvate carboxylase 2 OS=Chlamydomonas reinhardtii GN=Ppc2 PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 3.458e-30
Identity = 65/157 (41.40%), Postives = 94/157 (59.87%), Query Frame = 1
Query:  205 LSAA*KLYNAQE*LVKVAKQYGVKLTMFHXXXXXXXXXXXPTHLAILSQPPDTIHGSLRVTVQGEVIEQSFGEEHLCFRTLQRFSAATLEHGMHPPVSP-KPEWRALMDEMAVIATKEYRSIVFQEPRFVEYFRLATPEMEYGRMNIGSRPSNRKPK 672
            L+A   LY  QE LV + K   VKLT+FH           PTH+AI SQPP ++ G+ R+T QGE+++  FG   +    L+ ++ A L   M PP  P + EWRA+M+ ++ ++ + YR+IV   P F+ YF+ ATPE E G + IGSRP+ R+ K
Sbjct:  891 LAANWALYKCQERLVAITKANNVKLTLFHGRGGTVGRGGGPTHIAIQSQPPGSVEGTFRITEQGEMVQAKFGISGVALSQLETYTTAVLLATMRPPSPPRREEWRAVMEMLSRVSCESYRNIVHHSPLFLRYFKHATPEAELGNLYIGSRPARRRNK 1047          

HSP 2 Score: 25.0238 bits (53), Expect = 3.458e-30
Identity = 9/21 (42.86%), Postives = 14/21 (66.67%), Query Frame = 2
Query:  665 SQSGGIESVRAIPWIFTCTHD 727
            ++   I ++RAIPWIF  T +
Sbjct: 1046 NKDASISTLRAIPWIFAWTQN 1066          
The following BLAST results are available for this feature:
BLAST of EG358208 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 243
Match NameE-valueIdentityDescription
CAPP_SHIDS3.904e-3240.65Phosphoenolpyruvate carboxylase OS=Shigella dysent... [more]
CAPP_HAEIE5.084e-3241.29Phosphoenolpyruvate carboxylase OS=Haemophilus inf... [more]
CAPP4_ARATH8.604e-3243.51Phosphoenolpyruvate carboxylase 4 OS=Arabidopsis t... [more]
CAPP_VIBFM8.621e-3240.65Phosphoenolpyruvate carboxylase OS=Vibrio fischeri... [more]
CAPP_VIBF18.621e-3240.65Phosphoenolpyruvate carboxylase OS=Vibrio fischeri... [more]
CAPP_ALISL1.123e-3141.29Phosphoenolpyruvate carboxylase OS=Aliivibrio salm... [more]
CAPP_ERWT91.462e-3138.71Phosphoenolpyruvate carboxylase OS=Erwinia tasmani... [more]
CAPP_PHOPR1.462e-3142.57Phosphoenolpyruvate carboxylase OS=Photobacterium ... [more]
CAPP_PROMH7.126e-3140.65Phosphoenolpyruvate carboxylase OS=Proteus mirabil... [more]
CAPP2_CHLRE3.458e-3041.40Phosphoenolpyruvate carboxylase 2 OS=Chlamydomonas... [more]

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Properties
Property NameValue
Genbank description6b11 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl006b11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358208 ID=EG358208; Name=EG358208; organism=Citrus sinensis; type=EST; length=842bp
ACCTGAGGTGATGGTGCAAACACAGTGAACATTTCAACTGGTGCTTCAAT
TCTTGCTGCAGCTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTCGGTCTA
GTTCTTCTGCATGTGGAATTGCTGATGTGTTATAAGCTTTGGGTGTCGTT
ATTGACTTGGACCCTATGGGTGGGAGAAGGGGTGTGGGAGAGGATGCTGG
TGGTTTGTCGGCGGCTTGAAAGTTATATAATGCTCAGGAATAGCTTGTGA
AGGTCGCAAAGCAGTATGGTGTTAAACTCACAATGTTCCATGGCCGAGGA
GGGACAGTCGGAAGAGGTGGAGGACCCACCCATCTGGCTATATTGTCTCA
ACCACCTGATACAATTCATGGTTCACTTCGTGTGACGGTTCAAGGAGAAG
TTATTGAGCAGTCTTTTGGGGAGGAGCACTTGTGCTTCAGAACACTTCAG
CGTTTCTCAGCTGCTACACTTGAGCATGGAATGCATCCCCCAGTCTCACC
AAAACCAGAATGGCGTGCACTCATGGATGAGATGGCTGTCATTGCTACAA
AGGAATATCGTTCTATAGTATTCCAGGAACCTCGTTTTGTCGAATATTTT
CGCCTTGCAACACCAGAAATGGAGTATGGTCGGATGAACATTGGAAGTCG
TCCATCAAACCGAAAGCCAAAGTGGAGGTATTGAGTCAGTCCGTGCCATC
CCATGGATCTTCACATGCACTCACGACGATGTTCCATTTACCTGTGTGTC
TTGGTCTTTGTGGGCACATTTAAACATGTCATTCAGAAGGATATAAAGAA
TCTTGCACATGCCTACAGGAGATGAACTTGGCCGCTACACTC
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