EG358208

Overview
NameEG358208
Unique NameEG358208
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length842
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EG358208 vs. ExPASy Swiss-Prot
Match: CAPP_HAES2 (Phosphoenolpyruvate carboxylase OS=Haemophilus somnus (strain 2336) GN=ppc PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 3.473e-30
Identity = 63/155 (40.65%), Postives = 91/155 (58.71%), Query Frame = 1
Query:  205 LSAA*KLYNAQE*LVKVAKQYGVKLTMFHXXXXXXXXXXXPTHLAILSQPPDTIHGSLRVTVQGEVIEQSFGEEHLCFRTLQRFSAATLEHGMHPPVSPKPEWRALMDEMAVIATKEYRSIVFQEPRFVEYFRLATPEMEYGRMNIGSRPSNRKP 669
            ++A+   Y AQE LV + ++ GV+LT+FH           P H A+LSQPP ++   LRVT QGE+I    G   +   +   +++A LE  + PP  PK  WRA+M+E++  +   YRS+V  +  FV YFR ATPE E  ++ +GSRPS R P
Sbjct:  550 MAASWAQYRAQEQLVNLCEKMGVELTLFHGRGGTIGRGGAPAHAALLSQPPRSLKNGLRVTEQGEMIRFKLGLPAVAVNSFDLYASAILEANLLPPPEPKESWRAIMNELSDSSCNIYRSVVRGDKDFVPYFRSATPEQELSKLPLGSRPSKRNP 704          

HSP 2 Score: 30.4166 bits (67), Expect = 3.473e-30
Identity = 11/14 (78.57%), Postives = 14/14 (100.00%), Query Frame = 2
Query:  671 SGGIESVRAIPWIF 712
            +GG+ES+RAIPWIF
Sbjct:  705 NGGVESLRAIPWIF 718          
BLAST of EG358208 vs. ExPASy Swiss-Prot
Match: CAPP_HAES1 (Phosphoenolpyruvate carboxylase OS=Haemophilus somnus (strain 129Pt) GN=ppc PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 3.473e-30
Identity = 63/155 (40.65%), Postives = 91/155 (58.71%), Query Frame = 1
Query:  205 LSAA*KLYNAQE*LVKVAKQYGVKLTMFHXXXXXXXXXXXPTHLAILSQPPDTIHGSLRVTVQGEVIEQSFGEEHLCFRTLQRFSAATLEHGMHPPVSPKPEWRALMDEMAVIATKEYRSIVFQEPRFVEYFRLATPEMEYGRMNIGSRPSNRKP 669
            ++A+   Y AQE LV + ++ GV+LT+FH           P H A+LSQPP ++   LRVT QGE+I    G   +   +   +++A LE  + PP  PK  WRA+M+E++  +   YRS+V  +  FV YFR ATPE E  ++ +GSRPS R P
Sbjct:  550 MAASWAQYRAQEQLVNLCEKMGVELTLFHGRGGTIGRGGAPAHAALLSQPPRSLKNGLRVTEQGEMIRFKLGLPAVAVNSFDLYASAILEANLLPPPEPKESWRAIMNELSDSSCNIYRSVVRGDKDFVPYFRSATPEQELSKLPLGSRPSKRNP 704          

HSP 2 Score: 30.4166 bits (67), Expect = 3.473e-30
Identity = 11/14 (78.57%), Postives = 14/14 (100.00%), Query Frame = 2
Query:  671 SGGIESVRAIPWIF 712
            +GG+ES+RAIPWIF
Sbjct:  705 NGGVESLRAIPWIF 718          
BLAST of EG358208 vs. ExPASy Swiss-Prot
Match: CAPP_PASMU (Phosphoenolpyruvate carboxylase OS=Pasteurella multocida GN=ppc PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 5.888e-30
Identity = 62/155 (40.00%), Postives = 91/155 (58.71%), Query Frame = 1
Query:  205 LSAA*KLYNAQE*LVKVAKQYGVKLTMFHXXXXXXXXXXXPTHLAILSQPPDTIHGSLRVTVQGEVIEQSFGEEHLCFRTLQRFSAATLEHGMHPPVSPKPEWRALMDEMAVIATKEYRSIVFQEPRFVEYFRLATPEMEYGRMNIGSRPSNRKP 669
            ++A+   Y AQE LV +  +  ++LT+FH           P H A+LSQPP ++   LRVT QGE+I    G   +   +L  +++A LE  + PP  PK +WR +MDE++ I+ + YR +V  E  FV YFR ATPE E  ++ +GSRP+ R P
Sbjct:  550 MAASWAQYCAQEALVNLCDKCNIELTLFHGRGGTIGRGGAPAHAALLSQPPRSLKNGLRVTEQGEMIRFKLGLPAVAVESLGLYASAILEANLLPPPEPKAQWRTVMDELSTISCQIYRDVVRGEKDFVPYFRAATPEQELSKLPLGSRPAKRNP 704          

HSP 2 Score: 30.4166 bits (67), Expect = 5.888e-30
Identity = 11/14 (78.57%), Postives = 14/14 (100.00%), Query Frame = 2
Query:  671 SGGIESVRAIPWIF 712
            +GG+ES+RAIPWIF
Sbjct:  705 NGGVESLRAIPWIF 718          
BLAST of EG358208 vs. ExPASy Swiss-Prot
Match: CAPP_ALCBS (Phosphoenolpyruvate carboxylase OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=ppc PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.396e-28
Identity = 63/154 (40.91%), Postives = 85/154 (55.19%), Query Frame = 1
Query:  205 LSAA*KLYNAQE*LVKVAKQYGVKLTMFHXXXXXXXXXXXPTHLAILSQPPDTIHGSLRVTVQGEVIEQSFGEEHLCFRTLQRFSAATLEHGMHPPVSPKPEWRALMDEMAVIATKEYRSIVFQEPRFVEYFRLATPEMEYGRMNIGSRPSNRK 666
            L AA   Y AQE L  +    G+ LT+FH           PT +A+LSQPP ++ G +RVT QGEVI   +G   +    L+++ AATLE  + PP + +PEWR  M  +   +   YR +V  EP  V Y R  TPE E  R+ +GSRP+ RK
Sbjct:  558 LGAAWAQYRAQEKLTALFADNGIPLTLFHGRGGSISRGGSPTRMALLSQPPGSVAGRIRVTEQGEVIRFKYGRPSVAVFNLEQYVAATLEATLLPPQAARPEWRQQMQALTDTSVAGYRGVVRDEPELVRYLRTVTPETELSRLALGSRPARRK 711          

HSP 2 Score: 26.9498 bits (58), Expect = 1.396e-28
Identity = 10/15 (66.67%), Postives = 12/15 (80.00%), Query Frame = 2
Query:  677 GIESVRAIPWIFTCT 721
            GI S+RAIPW+F  T
Sbjct:  715 GISSLRAIPWVFAWT 729          
BLAST of EG358208 vs. ExPASy Swiss-Prot
Match: CAPP_PSEHT (Phosphoenolpyruvate carboxylase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=ppc PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.396e-28
Identity = 56/148 (37.84%), Postives = 89/148 (60.14%), Query Frame = 1
Query:  226 YNAQE*LVKVAKQYGVKLTMFHXXXXXXXXXXXPTHLAILSQPPDTIHGSLRVTVQGEVIEQSFGEEHLCFRTLQRFSAATLEHGMHPPVSPKPEWRALMDEMAVIATKEYRSIVFQEPRFVEYFRLATPEMEYGRMNIGSRPSNRKP 669
            Y A + LV++A + G++L +FH           P   A+ SQPP ++ G LRVT QGE+I   FG   +  ++L  ++ A L+  + PP  PKP+WR +M  ++  + + YR++V  +  FV YFR+ATPE+E  ++ +GSRP+ R P
Sbjct:  559 YEAMDKLVQLADKRGIELVLFHGRGGTVGRGGAPAAQALHSQPPGSLKGGLRVTEQGEMIRFKFGLPDVALQSLNIYAGAVLQSNLLPPPEPKPQWREVMALISEESCEHYRNVVRHDENFVPYFRMATPELELSKLPLGSRPAKRNP 706          

HSP 2 Score: 30.4166 bits (67), Expect = 1.396e-28
Identity = 11/14 (78.57%), Postives = 14/14 (100.00%), Query Frame = 2
Query:  671 SGGIESVRAIPWIF 712
            +GG+ES+RAIPWIF
Sbjct:  707 TGGVESLRAIPWIF 720          
BLAST of EG358208 vs. ExPASy Swiss-Prot
Match: CAPP_MYCUA (Phosphoenolpyruvate carboxylase OS=Mycobacterium ulcerans (strain Agy99) GN=ppc PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 9.605e-26
Identity = 64/161 (39.75%), Postives = 96/161 (59.63%), Query Frame = 1
Query:  205 LSAA*KLYNAQE*LVKVAKQYGVKLTMFHXXXXXXXXXXXPTHLAILSQPPDTIHGSLRVTVQGEVIEQSFGEEHLCFRTLQRFSAATLE------HGMHPPVSPKPEWRALMDEMAVIATKEYRSIVFQEPRFVEYFRLATPEMEYGRMNIGSRPSNRKP 669
            L+A   +Y A+  LV+ A++ G++L +FH           P++ AIL+QPP  + GSLR+T QGEVI   + E  +  R L+   AATLE       G+    +P     A++DE+A +A + Y  +V + P FVEYF+ +TP  E+G +NIGSRP++RKP
Sbjct:  598 LAANWAVYRAELALVETARKTGIRLRLFHGRGGTVGRGGGPSYQAILAQPPGAVSGSLRLTEQGEVIAAKYAEPQMARRNLESLLAATLESTLLAVEGLGDTAAPA---YAVLDEVAALAQRAYAELVHETPGFVEYFKASTPVSEFGALNIGSRPTSRKP 755          
BLAST of EG358208 vs. ExPASy Swiss-Prot
Match: CAPP_MYCPA (Phosphoenolpyruvate carboxylase OS=Mycobacterium paratuberculosis GN=ppc PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.638e-25
Identity = 64/161 (39.75%), Postives = 97/161 (60.25%), Query Frame = 1
Query:  205 LSAA*KLYNAQE*LVKVAKQYGVKLTMFHXXXXXXXXXXXPTHLAILSQPPDTIHGSLRVTVQGEVIEQSFGEEHLCFRTLQRFSAATLE------HGMHPPVSPKPEWRALMDEMAVIATKEYRSIVFQEPRFVEYFRLATPEMEYGRMNIGSRPSNRKP 669
            L+++  +Y A+  LV+VA++ G++L +FH           P++ AIL+QPP  ++GSLR+T QGEVI   + E  +  R L+   AATLE       G+     P     A++DE+AV+A + Y  +V + P FV+YF  +TP  E G +NIGSRP++RKP
Sbjct:  598 LASSWAVYRAELALVEVARKIGIRLRLFHGRGGTVGRGGGPSYEAILAQPPGAVNGSLRLTEQGEVIAAKYAEPQVAQRNLESLVAATLESTLLDVEGLGDTAEPA---YAVLDEVAVLAQRAYAELVHETPGFVDYFMASTPVSEIGSLNIGSRPTSRKP 755          
BLAST of EG358208 vs. ExPASy Swiss-Prot
Match: CAPP_MYCA1 (Phosphoenolpyruvate carboxylase OS=Mycobacterium avium (strain 104) GN=ppc PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.140e-25
Identity = 64/161 (39.75%), Postives = 97/161 (60.25%), Query Frame = 1
Query:  205 LSAA*KLYNAQE*LVKVAKQYGVKLTMFHXXXXXXXXXXXPTHLAILSQPPDTIHGSLRVTVQGEVIEQSFGEEHLCFRTLQRFSAATLE------HGMHPPVSPKPEWRALMDEMAVIATKEYRSIVFQEPRFVEYFRLATPEMEYGRMNIGSRPSNRKP 669
            L+++  +Y A+  LV+VA++ G++L +FH           P++ AIL+QPP  ++GSLR+T QGEVI   + E  +  R L+   AATLE       G+     P     A++DE+AV+A + Y  +V + P FV+YF  +TP  E G +NIGSRP++RKP
Sbjct:  598 LASSWAVYRAELALVEVARKTGIRLRLFHGRGGTVGRGGGPSYEAILAQPPGAVNGSLRLTEQGEVIAAKYAEPQVAQRNLESLVAATLESTLLDVEGLGDTAEPA---YAVLDEVAVLAQRAYAELVHETPGFVDYFMASTPVSEIGSLNIGSRPTSRKP 755          
BLAST of EG358208 vs. ExPASy Swiss-Prot
Match: CAPP_MYCS2 (Phosphoenolpyruvate carboxylase OS=Mycobacterium smegmatis GN=ppc PE=1 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.795e-25
Identity = 64/161 (39.75%), Postives = 94/161 (58.39%), Query Frame = 1
Query:  205 LSAA*KLYNAQE*LVKVAKQYGVKLTMFHXXXXXXXXXXXPTHLAILSQPPDTIHGSLRVTVQGEVIEQSFGEEHLCFRTLQRFSAATLE------HGMHPPVSPKPEWRALMDEMAVIATKEYRSIVFQEPRFVEYFRLATPEMEYGRMNIGSRPSNRKP 669
            L+A   LY A+  LV+ A++ G++L +FH           P++ AIL+QPP  + GSLR+T QGEVI   + E  +  R L+   AATLE       G+     P  +   ++DE+A +A + Y  +V + P FVEYF+ +TP  E G +NIGSRP++RKP
Sbjct:  598 LAANWALYRAELDLVESARKTGIRLRLFHGRGGTVGRGGGPSYDAILAQPPGAVKGSLRITEQGEVIAAKYAEPRIAHRNLETLLAATLEASLLDVEGLGEEAEPAYQ---VLDELAALAQRAYSELVHETPGFVEYFKTSTPVSEIGALNIGSRPTSRKP 755          
BLAST of EG358208 vs. ExPASy Swiss-Prot
Match: CAPP_BURXL (Phosphoenolpyruvate carboxylase OS=Burkholderia xenovorans (strain LB400) GN=ppc PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 2.564e-23
Identity = 65/161 (40.37%), Postives = 90/161 (55.90%), Query Frame = 1
Query:  220 KLYNAQE*LVKVAKQYGVKLTMFHXXXXXXXXXXXPTHLAILSQPPDTIHGSLRVTVQGEVIEQSFGEEHLCFRTLQRFSAATLE-----HGMHPPVSPKPEWRALMDEMAVIATKEYRSIVFQEPRFVEYFRLATPEMEYGRMNIGSRPSNRK---PKWR 678
            +LY A+  LV +  + GV L +FH           PT+ AILSQPP T+ G +R+T QGEVI   FG   +  R L+   AATLE     HG+ P  +  P +   M +++  A   YR++V++ P F EYF  +TP  E   +NIGSRP++RK   PK R
Sbjct:  656 ELYRAELALVSLFNERGVTLRLFHGRGGTVGRGGGPTYQAILSQPPGTVDGQIRLTEQGEVIASKFGNPEIGRRNLETVVAATLEASLLPHGIAP--AQLPAFEETMQQLSDAAMASYRALVYETPGFKEYFFESTPISEIAELNIGSRPASRKLQDPKQR 814          

HSP 2 Score: 21.557 bits (44), Expect = 2.564e-23
Identity = 8/12 (66.67%), Postives = 10/12 (83.33%), Query Frame = 2
Query:  680 IESVRAIPWIFT 715
            IE +RAIPW F+
Sbjct:  816 IEDLRAIPWGFS 827          
The following BLAST results are available for this feature:
BLAST of EG358208 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 243
Match NameE-valueIdentityDescription
CAPP_HAES23.473e-3040.65Phosphoenolpyruvate carboxylase OS=Haemophilus som... [more]
CAPP_HAES13.473e-3040.65Phosphoenolpyruvate carboxylase OS=Haemophilus som... [more]
CAPP_PASMU5.888e-3040.00Phosphoenolpyruvate carboxylase OS=Pasteurella mul... [more]
CAPP_ALCBS1.396e-2840.91Phosphoenolpyruvate carboxylase OS=Alcanivorax bor... [more]
CAPP_PSEHT1.396e-2837.84Phosphoenolpyruvate carboxylase OS=Pseudoalteromon... [more]
CAPP_MYCUA9.605e-2639.75Phosphoenolpyruvate carboxylase OS=Mycobacterium u... [more]
CAPP_MYCPA1.638e-2539.75Phosphoenolpyruvate carboxylase OS=Mycobacterium p... [more]
CAPP_MYCA12.140e-2539.75Phosphoenolpyruvate carboxylase OS=Mycobacterium a... [more]
CAPP_MYCS22.795e-2539.75Phosphoenolpyruvate carboxylase OS=Mycobacterium s... [more]
CAPP_BURXL2.564e-2340.37Phosphoenolpyruvate carboxylase OS=Burkholderia xe... [more]

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Properties
Property NameValue
Genbank description6b11 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl006b11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358208 ID=EG358208; Name=EG358208; organism=Citrus sinensis; type=EST; length=842bp
ACCTGAGGTGATGGTGCAAACACAGTGAACATTTCAACTGGTGCTTCAAT
TCTTGCTGCAGCTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTCGGTCTA
GTTCTTCTGCATGTGGAATTGCTGATGTGTTATAAGCTTTGGGTGTCGTT
ATTGACTTGGACCCTATGGGTGGGAGAAGGGGTGTGGGAGAGGATGCTGG
TGGTTTGTCGGCGGCTTGAAAGTTATATAATGCTCAGGAATAGCTTGTGA
AGGTCGCAAAGCAGTATGGTGTTAAACTCACAATGTTCCATGGCCGAGGA
GGGACAGTCGGAAGAGGTGGAGGACCCACCCATCTGGCTATATTGTCTCA
ACCACCTGATACAATTCATGGTTCACTTCGTGTGACGGTTCAAGGAGAAG
TTATTGAGCAGTCTTTTGGGGAGGAGCACTTGTGCTTCAGAACACTTCAG
CGTTTCTCAGCTGCTACACTTGAGCATGGAATGCATCCCCCAGTCTCACC
AAAACCAGAATGGCGTGCACTCATGGATGAGATGGCTGTCATTGCTACAA
AGGAATATCGTTCTATAGTATTCCAGGAACCTCGTTTTGTCGAATATTTT
CGCCTTGCAACACCAGAAATGGAGTATGGTCGGATGAACATTGGAAGTCG
TCCATCAAACCGAAAGCCAAAGTGGAGGTATTGAGTCAGTCCGTGCCATC
CCATGGATCTTCACATGCACTCACGACGATGTTCCATTTACCTGTGTGTC
TTGGTCTTTGTGGGCACATTTAAACATGTCATTCAGAAGGATATAAAGAA
TCTTGCACATGCCTACAGGAGATGAACTTGGCCGCTACACTC
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