EG358208

Overview
NameEG358208
Unique NameEG358208
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length842
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EG358208 vs. ExPASy Swiss-Prot
Match: CAPP_MYCLE (Phosphoenolpyruvate carboxylase OS=Mycobacterium leprae GN=ppc PE=3 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 2.892e-22
Identity = 61/158 (38.61%), Postives = 92/158 (58.23%), Query Frame = 1
Query:  205 LSAA*KLYNAQE*LVKVAKQYGVKLTMFHXXXXXXXXXXXPTHLAILSQPPDTIHGSLRVTVQGEVIEQSFGEEHLCFRTLQRFSAATLEH---GMHPPVSPKPEWRALMDEMAVIATKEYRSIVFQEPRFVEYFRLATPEMEYGRMNIGSRPSNRKP 669
            L+A   +Y A+  LV VA++ G++L +FH           P++ AIL+QPP  ++GSLR+T QGEVI   + E  +  R L+   AATLE     +           A++DE+A +A + Y  +V   P FV+YF+ +TP  E G +NIG+RP++RKP
Sbjct:  598 LAANWAVYRAELALVDVARKTGIRLRLFHGRGGTVGRGGGPSYQAILAQPPGAVNGSLRLTEQGEVIAAKYAEPQIARRNLESLVAATLESTLLDVEGLGDAAESAYAILDEVAGLARRSYAELV-NTPGFVDYFQASTPVSEIGSLNIGNRPTSRKP 754          
BLAST of EG358208 vs. ExPASy Swiss-Prot
Match: CAPP_COREF (Phosphoenolpyruvate carboxylase OS=Corynebacterium efficiens GN=ppc PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.642e-22
Identity = 56/150 (37.33%), Postives = 87/150 (58.00%), Query Frame = 1
Query:  223 LYNAQE*LVKVAKQYGVKLTMFHXXXXXXXXXXXPTHLAILSQPPDTIHGSLRVTVQGEVIEQSFGEEHLCFRTLQRFSAATLEHGMHPPVSPKPEWRA--LMDEMAVIATKEYRSIVFQEPRFVEYFRLATPEMEYGRMNIGSRPSNRK 666
            LY+A+  LV++ +   VKL +FH           P++ AIL+QP   + G++RVT QGE+I   +G      R L+   +ATLE  +   V      RA  +M E++ ++ + Y S+V ++P F++YF  +TP  E G +NIGSRPS+RK
Sbjct:  590 LYDAELRLVELCRGRNVKLRLFHGRGGTVGRGGGPSYDAILAQPKGAVRGAVRVTEQGEIISAKYGNPDTARRNLEALVSATLEASLLDDVELPNRERAHQIMGEISELSFRRYSSLVHEDPGFIQYFTQSTPLQEIGSLNIGSRPSSRK 739          

HSP 2 Score: 23.8682 bits (50), Expect = 4.642e-22
Identity = 8/25 (32.00%), Postives = 15/25 (60.00%), Query Frame = 2
Query:  659 TESQSGGIESVRAIPWIFTCTHDDV 733
            +  Q+  +E +RAIPW+ + +   V
Sbjct:  737 SRKQTNTVEDLRAIPWVLSWSQSRV 761          
BLAST of EG358208 vs. ExPASy Swiss-Prot
Match: CAPP_BURVG (Phosphoenolpyruvate carboxylase OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=ppc PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 6.030e-22
Identity = 58/152 (38.16%), Postives = 84/152 (55.26%), Query Frame = 1
Query:  220 KLYNAQE*LVKVAKQYGVKLTMFHXXXXXXXXXXXPTHLAILSQPPDTIHGSLRVTVQGEVIEQSFGEEHLCFRTLQRFSAATLEHGMHPPVSPK---PEWRALMDEMAVIATKEYRSIVFQEPRFVEYFRLATPEMEYGRMNIGSRPSNRK 666
            +LY A+  LV + +   + L +FH           PT+ AILSQPP T++G +R+T QGEVI   F    +  R L+   AATLE  + P  +     P + A M  ++  A   YR++V++ P F +YF  ATP  E   +NIGSRP++RK
Sbjct:  659 ELYRAELALVDLFRDRKITLRLFHGRGGTVGRGGGPTYQAILSQPPGTVNGQIRLTEQGEVIASKFANPEIGRRNLETVVAATLEASLLPQSNAPAQLPAFEAAMQALSDAAMASYRALVYETPGFTDYFFAATPITEIAELNIGSRPASRK 810          

HSP 2 Score: 21.557 bits (44), Expect = 6.030e-22
Identity = 8/12 (66.67%), Postives = 10/12 (83.33%), Query Frame = 2
Query:  680 IESVRAIPWIFT 715
            IE +RAIPW F+
Sbjct:  819 IEDLRAIPWGFS 830          
BLAST of EG358208 vs. ExPASy Swiss-Prot
Match: CAPP_VEREI (Phosphoenolpyruvate carboxylase OS=Verminephrobacter eiseniae (strain EF01-2) GN=ppc PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.249e-21
Identity = 58/154 (37.66%), Postives = 87/154 (56.49%), Query Frame = 1
Query:  220 KLYNAQE*LVKV----AKQYGVKLTMFHXXXXXXXXXXXPTHLAILSQPPDTIHGSLRVTVQGEVIEQSFGEEHLCFRTLQRFSAATLEHGMHPPVSPKPE-WRALMDEMAVIATKEYRSIVFQEPRFVEYFRLATPEMEYGRMNIGSRPSNRK 666
            +LY A+  LV++    A  +G++L MFH           P++ AIL+QPP T+ G +R+T QGEVI   +    +  R L+   AATLE  +  P  P P+ + A   +++  +   YR++V++ P F EYF  ATP  E   +NIGSRP+ RK
Sbjct:  596 ELYRAEIALVQLFDELAASHGIQLRMFHGRGGTVGRGGGPSYQAILAQPPGTVRGQIRLTEQGEVIASKYANPEIGRRNLEILVAATLEATLLQPTKPAPKTFLAAAGQLSQASMAAYRALVYETPGFTEYFFNATPIREIAELNIGSRPAARK 749          

HSP 2 Score: 21.557 bits (44), Expect = 2.249e-21
Identity = 8/12 (66.67%), Postives = 10/12 (83.33%), Query Frame = 2
Query:  680 IESVRAIPWIFT 715
            IE +RAIPW F+
Sbjct:  754 IEDLRAIPWGFS 765          
BLAST of EG358208 vs. ExPASy Swiss-Prot
Match: CAPP_THEVL (Phosphoenolpyruvate carboxylase OS=Thermosynechococcus vulcanus GN=ppc PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 2.921e-21
Identity = 48/157 (30.57%), Postives = 85/157 (54.14%), Query Frame = 1
Query:  205 LSAA*KLYNAQE*LVKVAKQYGVKLTMFHXXXXXXXXXXXPTHLAILSQPPDTIHGSLRVTVQGEVIEQSFGEEHLCFRTLQRFSAATLEHG-MHPPVSPKPEWRALMDEMAVIATKEYRSIVFQEPRFVEYFRLATPEMEYGRMNIGSRPSNRKPK 672
            LS+  ++Y AQ+ L K+A+ +G +L +FH           P + AIL+QP  TI G +++T QGEV+   +    L    L+  + A ++   +   +     W  +M+E+A  + + YR +++++P F+E+F   TP  E  ++ I SRP+ R  K
Sbjct:  663 LSSNWEIYKAQQQLQKIAESFGFQLRIFHGRGGSVGRGGGPAYAAILAQPAQTIKGRIKITEQGEVLASKYSLPELALFNLETVATAVIQASLLRSSIDEIEPWHEIMEELATRSRQCYRHLIYEQPEFIEFFNEVTPIQEISQLQISSRPTRRGGK 819          

HSP 2 Score: 26.1794 bits (56), Expect = 2.921e-21
Identity = 9/14 (64.29%), Postives = 13/14 (92.86%), Query Frame = 2
Query:  680 IESVRAIPWIFTCT 721
            +ES+RAIPW+F+ T
Sbjct:  822 LESLRAIPWVFSWT 835          
BLAST of EG358208 vs. ExPASy Swiss-Prot
Match: CAPP_THEEB (Phosphoenolpyruvate carboxylase OS=Thermosynechococcus elongatus (strain BP-1) GN=ppc PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 2.921e-21
Identity = 48/157 (30.57%), Postives = 85/157 (54.14%), Query Frame = 1
Query:  205 LSAA*KLYNAQE*LVKVAKQYGVKLTMFHXXXXXXXXXXXPTHLAILSQPPDTIHGSLRVTVQGEVIEQSFGEEHLCFRTLQRFSAATLEHG-MHPPVSPKPEWRALMDEMAVIATKEYRSIVFQEPRFVEYFRLATPEMEYGRMNIGSRPSNRKPK 672
            LS+  ++Y AQ+ L K+A+ +G +L +FH           P + AIL+QP  TI G +++T QGEV+   +    L    L+  + A ++   +   +     W  +M+E+A  + + YR +++++P F+E+F   TP  E  ++ I SRP+ R  K
Sbjct:  663 LSSNWEIYKAQQQLQKIAESFGFQLRIFHGRGGSVGRGGGPAYAAILAQPAQTIKGRIKITEQGEVLASKYSLPELALFNLETVATAVIQASLLRSSIDEIEPWHEIMEELATRSRQCYRHLIYEQPEFIEFFNEVTPIQEISQLQISSRPTRRGGK 819          

HSP 2 Score: 26.1794 bits (56), Expect = 2.921e-21
Identity = 9/14 (64.29%), Postives = 13/14 (92.86%), Query Frame = 2
Query:  680 IESVRAIPWIFTCT 721
            +ES+RAIPW+F+ T
Sbjct:  822 LESLRAIPWVFSWT 835          
BLAST of EG358208 vs. ExPASy Swiss-Prot
Match: CAPP_RALSO (Phosphoenolpyruvate carboxylase OS=Ralstonia solanacearum GN=ppc PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.923e-21
Identity = 58/152 (38.16%), Postives = 87/152 (57.24%), Query Frame = 1
Query:  220 KLYNAQE*LVKVAKQYGVKLTMFHXXXXXXXXXXXPTHLAILSQPPDTIHGSLRVTVQGEVIEQSFGEEHLCFRTLQRFSAATLEHGMHPPVS-PK--PEWRALMDEMAVIATKEYRSIVFQEPRFVEYFRLATPEMEYGRMNIGSRPSNRK 666
            +LY  +  LV++ ++ GV+L +FH           PT+ AILSQPP T++G +R+T QGE+I   F    +  R L+   AATLE  + P  + PK   E+ A M  ++  A   YR +V++ P F +YF   TP  E   +N+GSRP++RK
Sbjct:  644 ELYKTELALVELFERKGVRLRLFHGRGGTVGRGGGPTYQAILSQPPGTVNGQIRLTEQGEIISSKFANPEIGRRNLETIVAATLEATLLPTRNRPKGLEEFEAAMQALSDHAFSAYRHLVYETPGFKDYFFATTPITEIADLNLGSRPASRK 795          

HSP 2 Score: 21.557 bits (44), Expect = 2.923e-21
Identity = 8/12 (66.67%), Postives = 10/12 (83.33%), Query Frame = 2
Query:  680 IESVRAIPWIFT 715
            IE +RAIPW F+
Sbjct:  804 IEDLRAIPWGFS 815          
BLAST of EG358208 vs. ExPASy Swiss-Prot
Match: CAPP_RHOP2 (Phosphoenolpyruvate carboxylase OS=Rhodopseudomonas palustris (strain HaA2) GN=ppc PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.925e-21
Identity = 49/151 (32.45%), Postives = 90/151 (59.60%), Query Frame = 1
Query:  220 KLYNAQE*LVKVAKQYGVKLTMFHXXXXXXXXXXXPTHLAILSQPPDTIHGSLRVTVQGEVIEQSFGEEHLCFRTLQRFSAATLEHGMHPP--VSPKPEWRALMDEMAVIATKEYRSIVFQEPRFVEYFRLATPEMEYGRMNIGSRPSNRK 666
            +LY A+  L+++ + +G++L +FH           P++ AI++QP   ++G +R+T QGE+I   +    +    L+  +AATLE  +  P  V+P+ ++   M++++ +A K YR +V++   FV+YF  +T   E   +NIGSRP++RK
Sbjct:  605 ELYKAEIGLIEIFEHHGIRLRLFHGRGGSVGRGGGPSYDAIVAQPGGAVNGQIRITEQGEIITSKYSNREVGRNNLEILTAATLEASLLQPKRVAPQRDYLDAMEQLSAMAFKAYRGLVYETDGFVDYFWASTVITEISTLNIGSRPASRK 755          

HSP 2 Score: 24.6386 bits (52), Expect = 2.925e-21
Identity = 8/19 (42.11%), Postives = 14/19 (73.68%), Query Frame = 2
Query:  659 TESQSGGIESVRAIPWIFT 715
            +  ++  IE +RAIPW+F+
Sbjct:  753 SRKKTRAIEDLRAIPWVFS 771          
BLAST of EG358208 vs. ExPASy Swiss-Prot
Match: CAPP_BRAJA (Phosphoenolpyruvate carboxylase OS=Bradyrhizobium japonicum GN=ppc PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 3.805e-21
Identity = 54/151 (35.76%), Postives = 89/151 (58.94%), Query Frame = 1
Query:  220 KLYNAQE*LVKVAKQYGVKLTMFHXXXXXXXXXXXPTHLAILSQPPDTIHGSLRVTVQGEVIEQSFGEEHLCFRTLQRFSAATLEHG-MHPPVS-PKPEWRALMDEMAVIATKEYRSIVFQEPRFVEYFRLATPEMEYGRMNIGSRPSNRK 666
            +LY A+  LV V +++ V+L +FH           P++ AI++QP   ++G +R+T QGE+I   +    +    L+  +AATLE   +HP  S P+ E+   MDE++ +A + YR +V++   FV+YF  +T   E   +NIGSRP++RK
Sbjct:  604 ELYKAEINLVDVFERHHVRLRLFHGRGGSVGRGGGPSYDAIIAQPGGAVNGQIRITEQGEIISSKYSNAEVGRNNLEILAAATLEASLLHPRQSAPRREYLTAMDELSSLAFRAYRGLVYETDGFVDYFWASTVINEIATLNIGSRPASRK 754          

HSP 2 Score: 24.6386 bits (52), Expect = 3.805e-21
Identity = 8/19 (42.11%), Postives = 14/19 (73.68%), Query Frame = 2
Query:  659 TESQSGGIESVRAIPWIFT 715
            +  ++  IE +RAIPW+F+
Sbjct:  752 SRKKTRAIEDLRAIPWVFS 770          
BLAST of EG358208 vs. ExPASy Swiss-Prot
Match: CAPP_AZOC5 (Phosphoenolpyruvate carboxylase OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=ppc PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 3.805e-21
Identity = 55/155 (35.48%), Postives = 88/155 (56.77%), Query Frame = 1
Query:  205 LSAA*KLYNAQE*LVKVAKQYGVKLTMFHXXXXXXXXXXXPTHLAILSQPPDTIHGSLRVTVQGEVIEQSFGEEHLCFRTLQRFSAATLEHGM--HPPVSPKPEWRALMDEMAVIATKEYRSIVFQEPRFVEYFRLATPEMEYGRMNIGSRPSNR 663
            +S+  +LY A+  L++V  ++ VKL +FH           P++ AIL+QP   + G +R+T QGE+I   +       R L+   +ATLE  +      SP+PE+ A M+E++  A   YRS+V++ P F +YF  +T   E   +NIGSRP++R
Sbjct:  598 VSSGWELYKAEIALIEVFARHKVKLRLFHGRGGSVGRGGGPSYDAILAQPAGAVSGQIRITEQGEIISSKYSNPENGRRNLEILVSATLESTLLEAEQASPRPEFLAAMEELSKTAFTAYRSLVYETPGFEDYFWSSTVISEIATLNIGSRPASR 752          

HSP 2 Score: 25.409 bits (54), Expect = 3.805e-21
Identity = 8/19 (42.11%), Postives = 16/19 (84.21%), Query Frame = 2
Query:  659 TESQSGGIESVRAIPWIFT 715
            + +++  IE++RAIPW+F+
Sbjct:  751 SRNKTRAIEALRAIPWVFS 769          
The following BLAST results are available for this feature:
BLAST of EG358208 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 243
Match NameE-valueIdentityDescription
CAPP_MYCLE2.892e-2238.61Phosphoenolpyruvate carboxylase OS=Mycobacterium l... [more]
CAPP_COREF4.642e-2237.33Phosphoenolpyruvate carboxylase OS=Corynebacterium... [more]
CAPP_BURVG6.030e-2238.16Phosphoenolpyruvate carboxylase OS=Burkholderia vi... [more]
CAPP_VEREI2.249e-2137.66Phosphoenolpyruvate carboxylase OS=Verminephrobact... [more]
CAPP_THEVL2.921e-2130.57Phosphoenolpyruvate carboxylase OS=Thermosynechoco... [more]
CAPP_THEEB2.921e-2130.57Phosphoenolpyruvate carboxylase OS=Thermosynechoco... [more]
CAPP_RALSO2.923e-2138.16Phosphoenolpyruvate carboxylase OS=Ralstonia solan... [more]
CAPP_RHOP22.925e-2132.45Phosphoenolpyruvate carboxylase OS=Rhodopseudomona... [more]
CAPP_BRAJA3.805e-2135.76Phosphoenolpyruvate carboxylase OS=Bradyrhizobium ... [more]
CAPP_AZOC53.805e-2135.48Phosphoenolpyruvate carboxylase OS=Azorhizobium ca... [more]

Pages

back to top
Properties
Property NameValue
Genbank description6b11 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl006b11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358208 ID=EG358208; Name=EG358208; organism=Citrus sinensis; type=EST; length=842bp
ACCTGAGGTGATGGTGCAAACACAGTGAACATTTCAACTGGTGCTTCAAT
TCTTGCTGCAGCTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTCGGTCTA
GTTCTTCTGCATGTGGAATTGCTGATGTGTTATAAGCTTTGGGTGTCGTT
ATTGACTTGGACCCTATGGGTGGGAGAAGGGGTGTGGGAGAGGATGCTGG
TGGTTTGTCGGCGGCTTGAAAGTTATATAATGCTCAGGAATAGCTTGTGA
AGGTCGCAAAGCAGTATGGTGTTAAACTCACAATGTTCCATGGCCGAGGA
GGGACAGTCGGAAGAGGTGGAGGACCCACCCATCTGGCTATATTGTCTCA
ACCACCTGATACAATTCATGGTTCACTTCGTGTGACGGTTCAAGGAGAAG
TTATTGAGCAGTCTTTTGGGGAGGAGCACTTGTGCTTCAGAACACTTCAG
CGTTTCTCAGCTGCTACACTTGAGCATGGAATGCATCCCCCAGTCTCACC
AAAACCAGAATGGCGTGCACTCATGGATGAGATGGCTGTCATTGCTACAA
AGGAATATCGTTCTATAGTATTCCAGGAACCTCGTTTTGTCGAATATTTT
CGCCTTGCAACACCAGAAATGGAGTATGGTCGGATGAACATTGGAAGTCG
TCCATCAAACCGAAAGCCAAAGTGGAGGTATTGAGTCAGTCCGTGCCATC
CCATGGATCTTCACATGCACTCACGACGATGTTCCATTTACCTGTGTGTC
TTGGTCTTTGTGGGCACATTTAAACATGTCATTCAGAAGGATATAAAGAA
TCTTGCACATGCCTACAGGAGATGAACTTGGCCGCTACACTC
back to top