EG358208

Overview
NameEG358208
Unique NameEG358208
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length842
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EG358208 vs. ExPASy Swiss-Prot
Match: CAPP_THES7 (Phosphoenolpyruvate carboxylase OS=Thermus sp. (strain 71) GN=ppc PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 4.873e-12
Identity = 46/152 (30.26%), Postives = 66/152 (43.42%), Query Frame = 1
Query:  223 LYNAQE*LVKVAKQYGVKLTMFHXXXXXXXXXXXPTHLAILSQPPDTIHGSLRVTVQGEVIEQSFGEEHLCFRTLQRFSAATLEHGMHPPVSPKPEWRALMDEMAVIATKEYRSIVFQEPRFVEYFRLATPEMEYGRMNIGSRPSNRKPKWR 678
            LY AQE L  V +  G+ +  FH           P   AI   PP ++   LR+T QGE +   +    L  R L++      +  +   V PK  WR  + E    +   YR+++ QE  F  +F   TP  E G + I SRP  R  + R
Sbjct:  541 LYQAQEALHAVGEAQGIPVFFFHGRGTSTARGGGPAGRAIAGLPPKSVGHRLRLTEQGEALADRYAHPDLAVRHLEQLLYHFAQAALGDGVEPKAHWREALGEAGERSMARYRALLSQE-GFFPFFEAFTPIREIGELPIASRPVYRHGRVR 691          

HSP 2 Score: 20.7866 bits (42), Expect = 4.873e-12
Identity = 7/14 (50.00%), Postives = 9/14 (64.29%), Query Frame = 2
Query:  680 IESVRAIPWIFTCT 721
            I  +RAIPW+   T
Sbjct:  693 IRDLRAIPWVMAWT 706          
BLAST of EG358208 vs. ExPASy Swiss-Prot
Match: TRPD_CHLT3 (Anthranilate phosphoribosyltransferase OS=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) GN=trpD PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.044e-12
Identity = 37/53 (69.81%), Postives = 41/53 (77.36%), Query Frame = 1
Query:    1 T*GDGANTVNISTGASILAAACGAKVAKQGSRSSSSACGIADVL*ALGVVIDL 159
            T GDGANT NIST AS++A ACG KVAK G+RS SS CG ADVL A+G  IDL
Sbjct:   81 TGGDGANTFNISTAASLIAHACGVKVAKHGNRSISSRCGSADVLEAMGFKIDL 133          
BLAST of EG358208 vs. ExPASy Swiss-Prot
Match: TRPD_GEOSF (Anthranilate phosphoribosyltransferase OS=Geobacter sp. (strain FRC-32) GN=trpD PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.346e-11
Identity = 41/97 (42.27%), Postives = 56/97 (57.73%), Query Frame = 1
Query:    1 T*GDGANTVNISTGASILAAACGAKVAKQGSRSSSSACGIADVL*ALGVVIDLDPMXXXXXXXXXXXXLSAA*KLYNAQE*LVKVAKQYGVKLTMFH 291
            T GDG NT NIST  S + AACG KVAK G+RS SSACG ADV+ ALG+ +++ P                A  L+ A +  +   K+ G++ T+F+
Sbjct:   95 TGGDGTNTFNISTTVSFVVAACGVKVAKHGNRSVSSACGSADVVEALGISLEVTPETVENCINEAGIGFLYAPALHGAMKFAIGPRKEIGIR-TIFN 190          
BLAST of EG358208 vs. ExPASy Swiss-Prot
Match: TRPD_GEOMG (Anthranilate phosphoribosyltransferase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=trpD PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.759e-11
Identity = 41/97 (42.27%), Postives = 56/97 (57.73%), Query Frame = 1
Query:    1 T*GDGANTVNISTGASILAAACGAKVAKQGSRSSSSACGIADVL*ALGVVIDLDPMXXXXXXXXXXXXLSAA*KLYNAQE*LVKVAKQYGVKLTMFH 291
            T GDG NT NIST  S + A+CG KVAK G+R+ SSACG ADVL +LGV +D+ P                A  L+ A +  +   K+ G++ T+F+
Sbjct:   95 TGGDGTNTFNISTTVSFVVASCGVKVAKHGNRAVSSACGSADVLESLGVSLDVTPETVENAIARIGIGFLFAPALHGAMKHAIGPRKEIGIR-TIFN 190          
BLAST of EG358208 vs. ExPASy Swiss-Prot
Match: TRPD_COREF (Anthranilate phosphoribosyltransferase OS=Corynebacterium efficiens GN=trpD PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.759e-11
Identity = 36/55 (65.45%), Postives = 43/55 (78.18%), Query Frame = 1
Query:    1 T*GDGANTVNISTGASILAAACGAKVAKQGSRSSSSACGIADVL*ALGVVIDLDP 165
            T GDGANT+NI+TGAS++AAA G KV K G+RS SS  G ADVL AL + +DLDP
Sbjct:   85 TGGDGANTINITTGASLVAAAGGLKVVKHGNRSVSSKSGSADVLEALNIPLDLDP 139          
BLAST of EG358208 vs. ExPASy Swiss-Prot
Match: CAPP_RHOMR (Phosphoenolpyruvate carboxylase OS=Rhodothermus marinus GN=ppc PE=1 SV=1)

HSP 1 Score: 63.929 bits (154), Expect = 1.792e-11
Identity = 48/152 (31.58%), Postives = 71/152 (46.71%), Query Frame = 1
Query:  223 LYNAQE*LVKVAKQYGVKLTMFHXXXXXXXXXXXPTHLAILSQPPDTIHGSLRVTVQGEVIEQSFGEEHLCFRTLQRFSAATLEHGMHPPVS----PKPEWR-ALMDEMAVIATKEYRSIVFQEPRFVEYFRLATPEMEYGRMNIGSRPSNR 663
            L+ AQE L +V  ++GV   +FH             + AIL+ PP   +G +R T QGEVI   +    +  R L++   A L     P  S      P  R  LMDE+A  + + YR ++   P F  ++   TP  +  R+ I SRP +R
Sbjct:  606 LHRAQEQLAEVCLRHGVDFRLFHGRGGTVGRGGGRANQAILAMPPVVHNGRIRFTEQGEVISFRYALPEIAHRHLEQIVNAMLRVVGLPAASGTDGTDPATRNRLMDELAARSMRAYRRLI-DAPDFWSWYTRITPIDQISRLPIASRPVSR 756          

HSP 2 Score: 26.1794 bits (56), Expect = 1.792e-11
Identity = 10/24 (41.67%), Postives = 16/24 (66.67%), Query Frame = 2
Query:  650 VHQTESQSGGIESVRAIPWIFTCT 721
            V ++ ++    ES+RAIPW+F  T
Sbjct:  754 VSRSSAREVDFESLRAIPWVFAWT 777          
BLAST of EG358208 vs. ExPASy Swiss-Prot
Match: TRPD_GEOSL (Anthranilate phosphoribosyltransferase OS=Geobacter sulfurreducens GN=trpD PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.297e-11
Identity = 41/97 (42.27%), Postives = 56/97 (57.73%), Query Frame = 1
Query:    1 T*GDGANTVNISTGASILAAACGAKVAKQGSRSSSSACGIADVL*ALGVVIDLDPMXXXXXXXXXXXXLSAA*KLYNAQE*LVKVAKQYGVKLTMFH 291
            T GDG NT NIST  S + A+CG KVAK G+R+ SSACG ADVL +LGV +D+ P                A  L+ A +  +   K+ G++ T+F+
Sbjct:   95 TGGDGTNTFNISTTVSFVVASCGVKVAKHGNRAVSSACGSADVLESLGVNLDVTPETVEQAIAKIGIGFLFAPALHGAMKHAIGPRKEIGIR-TIFN 190          
BLAST of EG358208 vs. ExPASy Swiss-Prot
Match: TRPD_GEOLS (Anthranilate phosphoribosyltransferase OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=trpD PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.000e-11
Identity = 35/55 (63.64%), Postives = 40/55 (72.73%), Query Frame = 1
Query:    1 T*GDGANTVNISTGASILAAACGAKVAKQGSRSSSSACGIADVL*ALGVVIDLDP 165
            T GDG NT NIST  S + +ACG KVAK G+RS SSACG ADVL  LGV +D+ P
Sbjct:   95 TGGDGTNTFNISTTVSFIVSACGVKVAKHGNRSVSSACGSADVLEKLGVNLDVTP 149          
BLAST of EG358208 vs. ExPASy Swiss-Prot
Match: TRPD_CHLCV (Anthranilate phosphoribosyltransferase OS=Chlamydophila caviae GN=trpD PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.000e-11
Identity = 36/55 (65.45%), Postives = 43/55 (78.18%), Query Frame = 1
Query:    1 T*GDGANTVNISTGASILAAACGAKVAKQGSRSSSSACGIADVL*ALGVVIDLDP 165
            T GD ANTVNISTG++ILAAACG  +AK G+RS SS  G ADVL ALG+ I++ P
Sbjct:   79 TGGDLANTVNISTGSAILAAACGIPIAKHGNRSVSSQSGSADVLEALGIEIEMSP 133          
BLAST of EG358208 vs. ExPASy Swiss-Prot
Match: TRPD_ACIC1 (Anthranilate phosphoribosyltransferase OS=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) GN=trpD PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.117e-11
Identity = 36/52 (69.23%), Postives = 43/52 (82.69%), Query Frame = 1
Query:    7 GDGANTVNISTGASILAAACGAKVAKQGSRSSSSACGIADVL*ALGVVIDLD 162
            GD A+TVNIST A+I+AAA G  VAK G+R++SSACG AD+L ALGV IDLD
Sbjct:   88 GDRAHTVNISTMAAIVAAATGVVVAKHGNRAASSACGSADLLEALGVAIDLD 139          
The following BLAST results are available for this feature:
BLAST of EG358208 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 243
Match NameE-valueIdentityDescription
CAPP_THES74.873e-1230.26Phosphoenolpyruvate carboxylase OS=Thermus sp. (st... [more]
TRPD_CHLT36.044e-1269.81Anthranilate phosphoribosyltransferase OS=Chlorohe... [more]
TRPD_GEOSF1.346e-1142.27Anthranilate phosphoribosyltransferase OS=Geobacte... [more]
TRPD_GEOMG1.759e-1142.27Anthranilate phosphoribosyltransferase OS=Geobacte... [more]
TRPD_COREF1.759e-1165.45Anthranilate phosphoribosyltransferase OS=Coryneba... [more]
CAPP_RHOMR1.792e-1131.58Phosphoenolpyruvate carboxylase OS=Rhodothermus ma... [more]
TRPD_GEOSL2.297e-1142.27Anthranilate phosphoribosyltransferase OS=Geobacte... [more]
TRPD_GEOLS3.000e-1163.64Anthranilate phosphoribosyltransferase OS=Geobacte... [more]
TRPD_CHLCV3.000e-1165.45Anthranilate phosphoribosyltransferase OS=Chlamydo... [more]
TRPD_ACIC15.117e-1169.23Anthranilate phosphoribosyltransferase OS=Acidothe... [more]

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Properties
Property NameValue
Genbank description6b11 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl006b11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358208 ID=EG358208; Name=EG358208; organism=Citrus sinensis; type=EST; length=842bp
ACCTGAGGTGATGGTGCAAACACAGTGAACATTTCAACTGGTGCTTCAAT
TCTTGCTGCAGCTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTCGGTCTA
GTTCTTCTGCATGTGGAATTGCTGATGTGTTATAAGCTTTGGGTGTCGTT
ATTGACTTGGACCCTATGGGTGGGAGAAGGGGTGTGGGAGAGGATGCTGG
TGGTTTGTCGGCGGCTTGAAAGTTATATAATGCTCAGGAATAGCTTGTGA
AGGTCGCAAAGCAGTATGGTGTTAAACTCACAATGTTCCATGGCCGAGGA
GGGACAGTCGGAAGAGGTGGAGGACCCACCCATCTGGCTATATTGTCTCA
ACCACCTGATACAATTCATGGTTCACTTCGTGTGACGGTTCAAGGAGAAG
TTATTGAGCAGTCTTTTGGGGAGGAGCACTTGTGCTTCAGAACACTTCAG
CGTTTCTCAGCTGCTACACTTGAGCATGGAATGCATCCCCCAGTCTCACC
AAAACCAGAATGGCGTGCACTCATGGATGAGATGGCTGTCATTGCTACAA
AGGAATATCGTTCTATAGTATTCCAGGAACCTCGTTTTGTCGAATATTTT
CGCCTTGCAACACCAGAAATGGAGTATGGTCGGATGAACATTGGAAGTCG
TCCATCAAACCGAAAGCCAAAGTGGAGGTATTGAGTCAGTCCGTGCCATC
CCATGGATCTTCACATGCACTCACGACGATGTTCCATTTACCTGTGTGTC
TTGGTCTTTGTGGGCACATTTAAACATGTCATTCAGAAGGATATAAAGAA
TCTTGCACATGCCTACAGGAGATGAACTTGGCCGCTACACTC
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