EG358208

Overview
NameEG358208
Unique NameEG358208
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length842
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EG358208 vs. ExPASy Swiss-Prot
Match: TRPD_CORA7 (Anthranilate phosphoribosyltransferase OS=Corynebacterium aurimucosum (strain ATCC 700975 / DSM 44827 / CN-1) GN=trpD PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.682e-11
Identity = 33/55 (60.00%), Postives = 44/55 (80.00%), Query Frame = 1 
Query:    1 T*GDGANTVNISTGASILAAACGAKVAKQGSRSSSSACGIADVL*ALGVVIDLDP 165
            T GDGANT+N++TGAS++A+A G K+ K G+RS SS  G ADVL ALG+ ++LDP
Sbjct:   85 TGGDGANTINVTTGASLVASAGGVKMVKHGNRSVSSKSGSADVLEALGIPLNLDP 139
[Close]
BLAST of EG358208 vs. ExPASy Swiss-Prot
Match: TRPD_COLP3 (Anthranilate phosphoribosyltransferase OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=trpD PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.728e-11
Identity = 34/55 (61.82%), Postives = 42/55 (76.36%), Query Frame = 1 
Query:    1 T*GDGANTVNISTGASILAAACGAKVAKQGSRSSSSACGIADVL*ALGVVIDLDP 165
            T GDGANT+NIST A++LAAACG K+AK G+RS SS  G AD+L A GV + + P
Sbjct:   97 TGGDGANTINISTTAAVLAAACGLKMAKHGNRSVSSMSGSADLLEAFGVNLSMSP 151
[Close]
BLAST of EG358208 vs. ExPASy Swiss-Prot
Match: TRPD_CHLFF (Anthranilate phosphoribosyltransferase OS=Chlamydophila felis (strain Fe/C-56) GN=trpD PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.728e-11
Identity = 35/55 (63.64%), Postives = 43/55 (78.18%), Query Frame = 1 
Query:    1 T*GDGANTVNISTGASILAAACGAKVAKQGSRSSSSACGIADVL*ALGVVIDLDP 165
            T GD ANTVNISTG++IL+AACG  +AK G+RS SS  G ADVL ALG+ I++ P
Sbjct:   79 TGGDLANTVNISTGSAILSAACGIPIAKHGNRSVSSQSGSADVLEALGIEIEMTP 133
The following BLAST results are available for this feature:
BLAST of EG358208 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 243
Match NameE-valueIdentityDescription
TRPD_CORA76.682e-1160.00Anthranilate phosphoribosyltransferase OS=Coryneba... [more]
TRPD_COLP38.728e-1161.82Anthranilate phosphoribosyltransferase OS=Colwelli... [more]
TRPD_CHLFF8.728e-1163.64Anthranilate phosphoribosyltransferase OS=Chlamydo... [more]

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Properties
Property NameValue
Genbank description6b11 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl006b11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358208 ID=EG358208; Name=EG358208; organism=Citrus sinensis; type=EST; length=842bp
ACCTGAGGTGATGGTGCAAACACAGTGAACATTTCAACTGGTGCTTCAAT
TCTTGCTGCAGCTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTCGGTCTA
GTTCTTCTGCATGTGGAATTGCTGATGTGTTATAAGCTTTGGGTGTCGTT
ATTGACTTGGACCCTATGGGTGGGAGAAGGGGTGTGGGAGAGGATGCTGG
TGGTTTGTCGGCGGCTTGAAAGTTATATAATGCTCAGGAATAGCTTGTGA
AGGTCGCAAAGCAGTATGGTGTTAAACTCACAATGTTCCATGGCCGAGGA
GGGACAGTCGGAAGAGGTGGAGGACCCACCCATCTGGCTATATTGTCTCA
ACCACCTGATACAATTCATGGTTCACTTCGTGTGACGGTTCAAGGAGAAG
TTATTGAGCAGTCTTTTGGGGAGGAGCACTTGTGCTTCAGAACACTTCAG
CGTTTCTCAGCTGCTACACTTGAGCATGGAATGCATCCCCCAGTCTCACC
AAAACCAGAATGGCGTGCACTCATGGATGAGATGGCTGTCATTGCTACAA
AGGAATATCGTTCTATAGTATTCCAGGAACCTCGTTTTGTCGAATATTTT
CGCCTTGCAACACCAGAAATGGAGTATGGTCGGATGAACATTGGAAGTCG
TCCATCAAACCGAAAGCCAAAGTGGAGGTATTGAGTCAGTCCGTGCCATC
CCATGGATCTTCACATGCACTCACGACGATGTTCCATTTACCTGTGTGTC
TTGGTCTTTGTGGGCACATTTAAACATGTCATTCAGAAGGATATAAAGAA
TCTTGCACATGCCTACAGGAGATGAACTTGGCCGCTACACTC
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