CN185934

Overview
NameCN185934
Unique NameCN185934
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length743
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185934 vs. ExPASy Swiss-Prot
Match: VPP4_HUMAN (V-type proton ATPase 116 kDa subunit a isoform 4 OS=Homo sapiens GN=ATP6V0A4 PE=1 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 5.402e-51
Identity = 100/197 (50.76%), Postives = 134/197 (68.02%), Query Frame = 1
Query:  103 LLQTIGDQFEQWNLLVKREKSIYHTLNMLSLDVTKKCLVGEGWSPVFATKQIQDALERAAFDSNSQVGAIFQVLHTKESPPTYFRTNKFTSAFQEIVDAYGVAKYREANPGVFTIVTFPFLFAVMFGDWGHGICLLLGTLVLIVREKKLASQKLD-DITDMTFGGRYVILMMALFSIYTGLIYNEFFSVPFEIFSHS 690
            LLQ     +  W + V++ K++YH LNM ++DVT++C++ E W PV    +I+ ALE+    S S +  I   + +K +PPT+ RTNKFT+ FQ IVDAYGV  YRE NP  +TI+TFPFLFAVMFGD GHG  +LL  L +I+ E++L SQK D +I +  F GRY+IL+M +FSIYTGLIYN+ FS    IF  S
Sbjct:  284 LLQEAAANWHSWLIKVQKMKAVYHILNMCNIDVTQQCVIAEIWFPVADATRIKRALEQGMELSGSSMAPIMTTVQSKTAPPTFNRTNKFTAGFQNIVDAYGVGSYREINPAPYTIITFPFLFAVMFGDCGHGTVMLLAALWMILNERRLLSQKTDNEIWNTFFHGRYLILLMGIFSIYTGLIYNDCFSKSLNIFGSS 480          
BLAST of CN185934 vs. ExPASy Swiss-Prot
Match: VPP1_BOVIN (V-type proton ATPase 116 kDa subunit a isoform 1 OS=Bos taurus GN=ATP6V0A1 PE=2 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 9.215e-51
Identity = 98/197 (49.75%), Postives = 131/197 (66.50%), Query Frame = 1
Query:  103 LLQTIGDQFEQWNLLVKREKSIYHTLNMLSLDVTKKCLVGEGWSPVFATKQIQDALERAAFDSNSQVGAIFQVLHTKESPPTYFRTNKFTSAFQEIVDAYGVAKYREANPGVFTIVTFPFLFAVMFGDWGHGICLLLGTLVLIVREKKLASQKLD-DITDMTFGGRYVILMMALFSIYTGLIYNEFFSVPFEIFSHS 690
            +LQ        W + V++ K+IYHTLN+ ++DVT+KCL+ E W PV     IQ AL R    S S V +I   + T ++PPTY +TNKFT  FQ IVDAYG+  YRE NP  +TI+TFPFLFAVMFGD GHGI + L  + ++++E ++ SQK + ++    F GRY+IL+M +FSIYTGLIYN+ FS    IF  S
Sbjct:  282 VLQAAAKNIRVWFIKVRKMKAIYHTLNLCNIDVTQKCLIAEVWCPVTDLDSIQFALRRGTEHSGSTVPSILNRMQTNQTPPTYNKTNKFTYGFQNIVDAYGIGTYREINPAPYTIITFPFLFAVMFGDLGHGILMTLFAVWMVLKESRILSQKNENEMFSTIFSGRYIILLMGVFSIYTGLIYNDCFSKSLNIFGSS 478          
BLAST of CN185934 vs. ExPASy Swiss-Prot
Match: VPP2_HUMAN (V-type proton ATPase 116 kDa subunit a isoform 2 OS=Homo sapiens GN=ATP6V0A2 PE=1 SV=2)

HSP 1 Score: 196.052 bits (497), Expect = 1.738e-49
Identity = 92/178 (51.69%), Postives = 121/178 (67.98%), Query Frame = 1
Query:  148 VKREKSIYHTLNMLSLDVTKKCLVGEGWSPVFATKQIQDALERAAFDSNSQVGAIFQVLHTKESPPTYFRTNKFTSAFQEIVDAYGVAKYREANPGVFTIVTFPFLFAVMFGDWGHGICLLLGTLVLIVREKKLASQKLDDITDMTFGGRYVILMMALFSIYTGLIYNEFFSVPFEIF 681
            VK+ K+IYH LNM S DVT KCL+ E W P    + ++ ALE  + +S + + +   ++ TKE+PPT  RTNKFT  FQ IVDAYGV  YRE NP +FTI+TFPFLFAVMFGD+GHG  + L  L+L++ E      +  +I  M F GRY++L+M LFS+YTGLIYN+ FS    +F
Sbjct:  302 VKKMKAIYHMLNMCSFDVTNKCLIAEVWCPEADLQDLRRALEEGSRESGATIPSFMNIIPTKETPPTRIRTNKFTEGFQNIVDAYGVGSYREVNPALFTIITFPFLFAVMFGDFGHGFVMFLFALLLVLNENHPRLNQSQEIMRMFFNGRYILLLMGLFSVYTGLIYNDCFSKSVNLF 479          
BLAST of CN185934 vs. ExPASy Swiss-Prot
Match: VPH1_SCHPO (V-type proton ATPase subunit a OS=Schizosaccharomyces pombe GN=vph1 PE=2 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 5.056e-49
Identity = 88/194 (45.36%), Postives = 123/194 (63.40%), Query Frame = 1
Query:  106 LQTIGDQFEQWNLLVKREKSIYHTLNMLSLDVTKKCLVGEGWSPVFATKQIQDALERAAFDSNSQVGAIFQVLHTKESPPTYFRTNKFTSAFQEIVDAYGVAKYREANPGVFTIVTFPFLFAVMFGDWGHGICLLLGTLVLIVREKKLASQK-LDDITDMTFGGRYVILMMALFSIYTGLIYNEFFSVPFEIFS 684
            L  I +    W  ++ ++K+++  +N+ + D   KCL+ EGW P      +Q  L   +  ++SQ   I  V+HT E PPTYFR NKFT  FQ I+D+YG+A YRE N G+  IVTFPFLFA+MFGD GHG  +    L+ ++ EK L ++K LD+I  M F GRY++L+M LFS+Y G +YN+ FS P  IFS
Sbjct:  287 LTFIAEHISAWEAVLHKDKTVFQVMNLFNYDQNHKCLIAEGWCPTANLPMVQKTLRNISDLTDSQAPTILNVVHTSEQPPTYFRVNKFTEGFQSIIDSYGIATYREVNHGIVAIVTFPFLFAIMFGDLGHGAIMASVALMFVLYEKTLGAKKDLDEIVGMVFYGRYIVLLMGLFSMYVGFVYNDLFSKPMSIFS 480          
BLAST of CN185934 vs. ExPASy Swiss-Prot
Match: VPP2_BOVIN (V-type proton ATPase 116 kDa subunit a isoform 2 OS=Bos taurus GN=ATP6V0A2 PE=2 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.126e-48
Identity = 91/178 (51.12%), Postives = 119/178 (66.85%), Query Frame = 1
Query:  148 VKREKSIYHTLNMLSLDVTKKCLVGEGWSPVFATKQIQDALERAAFDSNSQVGAIFQVLHTKESPPTYFRTNKFTSAFQEIVDAYGVAKYREANPGVFTIVTFPFLFAVMFGDWGHGICLLLGTLVLIVREKKLASQKLDDITDMTFGGRYVILMMALFSIYTGLIYNEFFSVPFEIF 681
            VK+ K+IYH LNM S DVT KCL+ E W P     +++ ALE  + +S   + +    + TKE+PPT  RTNKFT  FQ IVDAYGV  Y+E NP +FTI+TFPFLFAVMFGD+GHG  + L  L+L++ E      +  +I  M F GRY++L+M LFS+YTGLIYN+ FS    +F
Sbjct:  302 VKKMKAIYHMLNMCSFDVTNKCLIAEVWCPEADLHELRRALEEGSRESGGTIPSFMNTIPTKETPPTLIRTNKFTEGFQNIVDAYGVGSYQEVNPALFTIITFPFLFAVMFGDFGHGFVMFLFALLLVLNENHPRLNQSQEIMRMFFNGRYILLLMGLFSVYTGLIYNDCFSKSVNLF 479          
BLAST of CN185934 vs. ExPASy Swiss-Prot
Match: VPP2_MOUSE (V-type proton ATPase 116 kDa subunit a isoform 2 OS=Mus musculus GN=Atp6v0a2 PE=1 SV=2)

HSP 1 Score: 192.586 bits (488), Expect = 1.921e-48
Identity = 91/178 (51.12%), Postives = 119/178 (66.85%), Query Frame = 1
Query:  148 VKREKSIYHTLNMLSLDVTKKCLVGEGWSPVFATKQIQDALERAAFDSNSQVGAIFQVLHTKESPPTYFRTNKFTSAFQEIVDAYGVAKYREANPGVFTIVTFPFLFAVMFGDWGHGICLLLGTLVLIVREKKLASQKLDDITDMTFGGRYVILMMALFSIYTGLIYNEFFSVPFEIF 681
            V++ K+IYH LNM S DVT KCL+ E W P      ++ ALE  + +S + + +    + TKE+PPT  RTNKFT  FQ IVDAYGV  YRE NP +FTI+TFPFLFAVMFGD+GHG  + L  L+L++ E      +  +I  M F GRY++L+M LFS+YTGLIYN+ FS    +F
Sbjct:  302 VRKMKAIYHMLNMCSFDVTNKCLIAEVWCPEVDLPGLRRALEEGSRESGATIPSFMNTIPTKETPPTLIRTNKFTEGFQNIVDAYGVGSYREVNPALFTIITFPFLFAVMFGDFGHGFVMFLFALLLVLNENHPRLSQSQEILRMFFDGRYILLLMGLFSVYTGLIYNDCFSKSVNLF 479          
BLAST of CN185934 vs. ExPASy Swiss-Prot
Match: STV1_YEAST (V-type proton ATPase subunit a, Golgi isoform OS=Saccharomyces cerevisiae GN=STV1 PE=1 SV=2)

HSP 1 Score: 189.889 bits (481), Expect = 1.245e-47
Identity = 93/192 (48.44%), Postives = 122/192 (63.54%), Query Frame = 1
Query:  106 LQTIGDQFEQWNLLVKREKSIYHTLNMLSLDVTKKCLVGEGWSPVFATKQIQDALERAAFDSNSQVGAIFQVLHTKESPPTYFRTNKFTSAFQEIVDAYGVAKYREANPGVFTIVTFPFLFAVMFGDWGHGICLLLGTLVLIVREKKLASQKLDDITDMTFGGRYVILMMALFSIYTGLIYNEFFSVPFEIF 681
            L  I DQ   W+ + KREK +Y TLN    +   + L+ EGW P      +QD+L+       S+   +F V+ T + PPTY RTNKFT AFQ IVDAYG+A Y+E N G+ T+VTFPF+FA+MFGD GHG  L L  L L++ E+K  +   D+I DM F GRYV+L+M  FS+YTGL+YN+ FS    IF
Sbjct:  347 LLVIHDQLPVWSAMTKREKYVYTTLNKFQQE--SQGLIAEGWVPSTELIHLQDSLKDYIETLGSEYSTVFNVILTNKLPPTYHRTNKFTQAFQSIVDAYGIATYKEINAGLATVVTFPFMFAIMFGDMGHGFILFLMALFLVLNERKFGAMHRDEIFDMAFTGRYVLLLMGAFSVYTGLLYNDIFSKSMTIF 536          
BLAST of CN185934 vs. ExPASy Swiss-Prot
Match: VPH1_YEAST (V-type proton ATPase subunit a, vacuolar isoform OS=Saccharomyces cerevisiae GN=VPH1 PE=1 SV=3)

HSP 1 Score: 182.956 bits (463), Expect = 1.522e-45
Identity = 90/192 (46.88%), Postives = 118/192 (61.46%), Query Frame = 1
Query:  106 LQTIGDQFEQWNLLVKREKSIYHTLNMLSLDVTKKCLVGEGWSPVFATKQIQDALERAAFDSNSQVGAIFQVLHTKESPPTYFRTNKFTSAFQEIVDAYGVAKYREANPGVFTIVTFPFLFAVMFGDWGHGICLLLGTLVLIVREKKLASQKLDDITDMTFGGRYVILMMALFSIYTGLIYNEFFSVPFEIF 681
            L  I  + + W   V REK+I+  LN  + D  +K L+ EGW P      +Q  L          V +I QVL T  +PPT+ RTNKFT+ FQ I D YG+A+YRE N G+ TIVTFPF+FA+MFGD GHG  + L  L L++ EKK+   K  +I DM F GRY+IL+M +FS+YTG +YN+ FS    IF
Sbjct:  299 LYAIAKELDSWFQDVTREKAIFEILNKSNYDTNRKILIAEGWIPRDELATLQARLGEMIARLGIDVPSIIQVLDTNHTPPTFHRTNKFTAGFQSICDCYGIAQYREINAGLPTIVTFPFMFAIMFGDMGHGFLMTLAALSLVLNEKKINKMKRGEIFDMAFTGRYIILLMGVFSMYTGFLYNDIFSKTMTIF 490          
BLAST of CN185934 vs. ExPASy Swiss-Prot
Match: VPH1_NEUCR (V-type proton ATPase subunit a OS=Neurospora crassa GN=vph-1 PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 3.174e-43
Identity = 85/192 (44.27%), Postives = 119/192 (61.98%), Query Frame = 1
Query:  106 LQTIGDQFEQWNLLVKREKSIYHTLNMLSLDVTKKCLVGEGWSPVFATKQIQDALERAAFDSNSQVGAIFQVLHTKESPPTYFRTNKFTSAFQEIVDAYGVAKYREANPGVFTIVTFPFLFAVMFGDWGHGICLLLGTLVLIVREKKLASQKLDDITDMTFGGRYVILMMALFSIYTGLIYNEFFSVPFEIF 681
            L  I      W + + +EK++Y+TLN+ S D  ++ L+ EGW P      I+  L+     +   V +I   + T ++PPTY +TNKFT AFQ IV+AYG A Y+E NP +  IVTFPFLFAVMFGD+GH + +L   L +I  EK L      ++  M F GRY++L+MA+FS+YTGLIYN+ FS    +F
Sbjct:  304 LAQISQSLSAWMITISKEKAVYNTLNLFSYDRARRTLIAEGWCPTNDLPLIRSTLQDVNNRAGLSVPSIINEIRTNKTPPTYLKTNKFTEAFQTIVNAYGTATYQEVNPAIPVIVTFPFLFAVMFGDFGHALIMLCAALAMIYWEKPLKKVTF-ELFAMVFYGRYIVLVMAVFSVYTGLIYNDVFSKSMTLF 494          
BLAST of CN185934 vs. ExPASy Swiss-Prot
Match: VPP3_HUMAN (V-type proton ATPase 116 kDa subunit a isoform 3 OS=Homo sapiens GN=TCIRG1 PE=1 SV=3)

HSP 1 Score: 162.155 bits (409), Expect = 2.781e-39
Identity = 82/179 (45.81%), Postives = 115/179 (64.25%), Query Frame = 1
Query:  148 VKREKSIYHTLNMLSLDVTKKCLVGEGWSPVFATKQIQDALERAAFDSNSQVGAIFQVLHTKESPPTYFRTNKFTSAFQEIVDAYGVAKYREANPGVFTIVTFPFLFAVMFGDWGHGICLLLGTLVLIVREKKLASQKL-DDITDMTFGGRYVILMMALFSIYTGLIYNEFFSVPFEIF 681
            V + K++Y  LN  S+  T KCL+ E W  V     +Q+AL  ++ +    V A+   +  ++ PPT  RTN+FT++FQ IVDAYGV +Y+E NP  +TI+TFPFLFAVMFGD GHG+ + L  L +++ E + A +   ++I    F GRY++L+M LFSIYTG IYNE FS    IF
Sbjct:  296 VHKMKAVYLALNQCSVSTTHKCLIAEAWCSVRDLPALQEALRDSSMEEG--VSAVAHRIPCRDMPPTLIRTNRFTASFQGIVDAYGVGRYQEVNPAPYTIITFPFLFAVMFGDVGHGLLMFLFALAMVLAENRPAVKAAQNEIWQTFFRGRYLLLLMGLFSIYTGFIYNECFSRATSIF 472          
The following BLAST results are available for this feature:
BLAST of CN185934 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
VPP4_HUMAN5.402e-5150.76V-type proton ATPase 116 kDa subunit a isoform 4 O... [more]
VPP1_BOVIN9.215e-5149.75V-type proton ATPase 116 kDa subunit a isoform 1 O... [more]
VPP2_HUMAN1.738e-4951.69V-type proton ATPase 116 kDa subunit a isoform 2 O... [more]
VPH1_SCHPO5.056e-4945.36V-type proton ATPase subunit a OS=Schizosaccharomy... [more]
VPP2_BOVIN1.126e-4851.12V-type proton ATPase 116 kDa subunit a isoform 2 O... [more]
VPP2_MOUSE1.921e-4851.12V-type proton ATPase 116 kDa subunit a isoform 2 O... [more]
STV1_YEAST1.245e-4748.44V-type proton ATPase subunit a, Golgi isoform OS=S... [more]
VPH1_YEAST1.522e-4546.88V-type proton ATPase subunit a, vacuolar isoform O... [more]
VPH1_NEUCR3.174e-4344.27V-type proton ATPase subunit a OS=Neurospora crass... [more]
VPP3_HUMAN2.781e-3945.81V-type proton ATPase 116 kDa subunit a isoform 3 O... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002B15_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002B15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185934 ID=CN185934; Name=CN185934; organism=Citrus sinensis; type=EST; length=743bp
TTTATGAGATTCGATAAACAGCTCAGGCAATTTCGGAGGTTTCGGGAAGC
CTTTCAGAGCTGAAGACTACTCTAGATGCTGGGCTGCTTCCTCTGTGGAA
ATTTATTGCAAACTATTGGAGACCAATTTGAACAATGGAACCTTTTGGTC
AAGAGGGAGAAATCAATCTATCACACTTTGAACATGCTTAGCCTTGATGT
GACCAAAAAGTGTCTTGTGGGTGAGGGGTGGAGTCCTGTTTTCGCCACAA
AGCAGATTCAGGATGCATTGGAGCGGGCTGCATTTGACTCCAATTCTCAA
GTTGGAGCTATTTTTCAGGTTTTGCATACGAAAGAGTCTCCGCCTACCTA
TTTTCGCACAAACAAATTTACTTCTGCCTTTCAGGAGATTGTTGATGCAT
ATGGGGTGGCTAAGTATCGAGAAGCAAACCCTGGTGTATTCACCATTGTC
ACATTCCCTTTTCTTTTCGCTGTCATGTTTGGTGACTGGGGGCATGGAAT
ATGCTTATTACTTGGGACCCTGGTTCTTATAGTCCGGGAAAAGAAACTTG
CAAGCCAGAAGCTTGATGACATTACAGACATGACCTTTGGCGGTCGTTAT
GTTATTTTGATGATGGCACTCTTTTCAATTTACACCGGCTTAATCTATAA
TGAGTTCTTCTCAGTTCCATTCGAAATATTTAGTCACTCAGCGTATGCAT
GCCGTGATCTCTCTTGCAGTGAGGCTACTACAGTTGGCTTAAT
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