CN185911
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185911 vs. ExPASy Swiss-Prot
Match: RS19_METS5 (30S ribosomal protein S19P OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=rps19p PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.638e-29 Identity = 61/134 (45.52%), Postives = 92/134 (68.66%), Query Frame = -1 Query: 241 FKKFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 642 +KKF +RG L+ LL+M D+ +KL AR RR ++G LI+K+RK +R++ + +P++TH+R+++I+PEM+G VYNGK F + ++ PEMIGHYL EFSI + V+HG PG+ AT SS F+ +K Sbjct: 9 WKKFRYRGKSLEELLNMPMDDFIKLLPARQRRSLRKGFTPSERTLIEKIRKIRRDS---KADKPIKTHVRSLVILPEMVGLKFAVYNGKQFVEFQVVPEMIGHYLGEFSIPIQKVEHGEPGLKATRSSLFMAMK 139
BLAST of CN185911 vs. ExPASy Swiss-Prot
Match: RS19_HALLT (30S ribosomal protein S19P OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=rps19p PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 3.648e-29 Identity = 63/136 (46.32%), Postives = 90/136 (66.18%), Query Frame = -1 Query: 241 RTFKKFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 648 R K+F++RG LD L +M DE+ +L AR RR RGL + L++K+R +E P+RTHLR+M I+PE +G VYNG +F +V+++PEMIGH+L EF ++ V+HG+ GIGAT SS+F+PLK Sbjct: 9 REGKEFAYRGHSLDELQEMDVDEVAELLPARQRRSIVRGLGTEQQKLLEKVRSRDKETTADN---PIRTHLRDMPILPEFVGVTFSVYNGHSFERVQVEPEMIGHFLGEFHLTRSTVEHGQAGIGATRSSKFVPLK 141
BLAST of CN185911 vs. ExPASy Swiss-Prot
Match: RS19_SULSO (30S ribosomal protein S19P OS=Sulfolobus solfataricus GN=rps19p PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 4.765e-29 Identity = 62/134 (46.27%), Postives = 91/134 (67.91%), Query Frame = -1 Query: 241 FKKFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 642 +K F +RG +D LL+M DE +KL +R RR +RG L++K+RK +RE G+ + ++TH+RN++I+PE+IG + VYNGK F + + PEMIGHYL E+SI+ K V+HG PG+ AT SS F+ +K Sbjct: 9 WKNFKYRGKSIDELLNMPMDEFIKLLPSRQRRSLKRGFTDAQRHLLEKVRKYRRE---GKFNKTIKTHVRNLVILPELIGLKMAVYNGKEFVEFTVTPEMIGHYLGEYSITTKKVEHGEPGLKATRSSLFLAMK 139
BLAST of CN185911 vs. ExPASy Swiss-Prot
Match: RS19_HYPBU (30S ribosomal protein S19P OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=rps19p PE=3 SV=2) HSP 1 Score: 128.257 bits (321), Expect = 4.765e-29 Identity = 68/134 (50.75%), Postives = 90/134 (67.16%), Query Frame = -1 Query: 241 FKKFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 642 +KKF +RG L+ LL M D+ +KL AR RR RGL L+ K+RKA+++ G+K V+TH+R+MII+PEM+G I VYNGK F V+I PEMIGHYL EFS + K V+HG PG+ AT S+ + LK Sbjct: 12 WKKFRYRGYTLEELLAMPMDQFIKLLPARQRRSLLRGLTDAQRRLLWKIRKARQKMLQGKKVV-VKTHVRDMIILPEMVGLTIAVYNGKEFIPVKITPEMIGHYLGEFSPTCKQVQHGEPGLKATRSTLHVALK 144
BLAST of CN185911 vs. ExPASy Swiss-Prot
Match: RS19_HALMA (30S ribosomal protein S19P OS=Haloarcula marismortui GN=rps19p PE=1 SV=4) HSP 1 Score: 127.872 bits (320), Expect = 6.223e-29 Identity = 62/132 (46.97%), Postives = 90/132 (68.18%), Query Frame = -1 Query: 241 KFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 636 +FSFRG LD L +M +E+ +L AR RR RGL + L++K R+A E + P+RTHLR+M +VPEM+G V++G+ F +V+++PEM+GHYL EF ++ V+HG+ GIGAT SS+F+PLK Sbjct: 12 EFSFRGHTLDELQEMELEEVAELLPARQRRSIVRGLTEEKHKLLEKAREAGEEETAND---PIRTHLRDMPVVPEMVGLTFAVHDGQNFERVKVEPEMLGHYLGEFQLTRSSVEHGQAGIGATRSSKFVPLK 140
BLAST of CN185911 vs. ExPASy Swiss-Prot
Match: RS19_AERPE (30S ribosomal protein S19P OS=Aeropyrum pernix GN=rps19p PE=3 SV=3) HSP 1 Score: 127.872 bits (320), Expect = 6.223e-29 Identity = 67/136 (49.26%), Postives = 89/136 (65.44%), Query Frame = -1 Query: 241 FKKFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPG--EKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 642 +KKF +RG L+ LL M +EL +LF AR RR RGL L+ K+RK +R G ++P +RTH+R+M+I+PEM+G I VYNGK F V+I PEMIGHYL EFS + + V+HG PG+ AT SS + K Sbjct: 9 WKKFRYRGRTLEELLKMDIEELARLFPARQRRSLLRGLTPAQQKLLLKVRKIRRRLEEGRLKRPPVIRTHVRDMVILPEMVGLTIAVYNGKEFIPVKIVPEMIGHYLGEFSPTTRIVQHGEPGLKATRSSLHVASK 144
BLAST of CN185911 vs. ExPASy Swiss-Prot
Match: RS19_METB6 (30S ribosomal protein S19P OS=Methanoregula boonei (strain 6A8) GN=rps19p PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 8.127e-29 Identity = 65/140 (46.43%), Postives = 91/140 (65.00%), Query Frame = -1 Query: 241 LPKKRTFKKFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 660 +P++R ++F++RG +D L M EL+ L ARARR+F RGL R L++K+R E +RTHLR MI++PEMIG I +YNGK F +VE +PE + HYL EF+++ K V HG GIGAT S+++PLK Sbjct: 11 MPRRR--EEFTYRGYKIDELKAMGLSELIPLMPARARRKFNRGLNRGEETLLEKIRGGD---------EKIRTHLREMIVMPEMIGKSIEIYNGKEFLKVEFQPESVFHYLGEFALTRKRVTHGSAGIGATRGSKYVPLK 139
BLAST of CN185911 vs. ExPASy Swiss-Prot
Match: RS19_PYRAE (30S ribosomal protein S19P OS=Pyrobaculum aerophilum GN=rps19p PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.061e-28 Identity = 69/131 (52.67%), Postives = 89/131 (67.94%), Query Frame = -1 Query: 241 FSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 633 F +RG L+ LL+MS DE +KL AR RR +RGLK + L++K+RKAKR A G+K +RTH R+MII+PEM+G I VYNG T+ V I P IGHYL EF+++ K V+HG PG+ AT SS I K Sbjct: 29 FRYRGKTLEELLNMSMDEFIKLLPARQRRSLKRGLKPEHRKLLEKIRKAKRLAAQGKKVV-IRTHCRDMIILPEMVGLTIHVYNGITYIPVFISPWHIGHYLGEFALTTKIVQHGEPGLKATRSSLHIAAK 158
BLAST of CN185911 vs. ExPASy Swiss-Prot
Match: RS19_IGNH4 (30S ribosomal protein S19P OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=rps19p PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.386e-28 Identity = 65/134 (48.51%), Postives = 90/134 (67.16%), Query Frame = -1 Query: 241 FKKFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 642 +KKF +RG L+ LL+M D+ ++L AR RR +RG L++K+ KA++E G+K + +RTH+R+M+I+P M+G I VYNGK F V+I PEMIGHYL EFS + VKHG PG+ AT SS F+ K Sbjct: 7 WKKFRYRGKTLEELLEMPLDDFIELLPARQRRSLKRGFNDAQRRLLEKVLKARKEMEKGKKVK-IRTHVRDMVILPIMVGLTIEVYNGKEFVPVKIVPEMIGHYLGEFSHTTAVVKHGEPGLKATRSSLFVAAK 139
BLAST of CN185911 vs. ExPASy Swiss-Prot
Match: RS19_NATPD (30S ribosomal protein S19P OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=rps19p PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.365e-28 Identity = 62/132 (46.97%), Postives = 88/132 (66.67%), Query Frame = -1 Query: 241 KFSFRGVDLDALLDMSNDELVKLFSARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 636 +F++RG LD L +M DE+ +L AR RR +RGL + L+ + R+A E P+RTHLR+M I+P +G VYNG++F +VE++PEMIGHYL EF ++ V+HG+ GIGAT SS+F+PLK Sbjct: 12 EFTYRGHTLDELQEMELDEVAELLPARQRRTIKRGLSVEQEKLLDEAREAGEEETANN---PIRTHLRDMPILPRFVGLTFAVYNGQSFERVEVEPEMIGHYLGEFQLTRTSVEHGQAGIGATRSSKFVPLK 140 The following BLAST results are available for this feature:
BLAST of CN185911 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185911 ID=CN185911; Name=CN185911; organism=Citrus sinensis; type=EST; length=774bpback to top |