CN185908
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185908 vs. ExPASy Swiss-Prot
Match: ILVC_MOOTA (Ketol-acid reductoisomerase OS=Moorella thermoacetica (strain ATCC 39073) GN=ilvC PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.094e-12 Identity = 39/118 (33.05%), Postives = 65/118 (55.08%), Query Frame = 3 Query: 129 PKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFT--FATTLEQEYRSDIFGERGILLGAVHGIVESLFRRFTENGMNEDLAYKNTVECI 476 P ++ VI V PKG G VRR YV+G+ G+ + A++QD G+A + L ++ +G+ TT ++E +D+FGE+ +L G +V++ F E G ++AY EC+ Sbjct: 120 PADVDVIMVAPKGPGHLVRRTYVEGQ-----GVPALIAIYQDASGKAKEIGLAYAKGIGATRAGVIETTFKEETETDLFGEQAVLCGGTTALVKAGFETLVEAGYQPEIAY---FECL 229
BLAST of CN185908 vs. ExPASy Swiss-Prot
Match: ILVC_LYSSC (Ketol-acid reductoisomerase OS=Lysinibacillus sphaericus (strain C3-41) GN=ilvC PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.094e-12 Identity = 40/115 (34.78%), Postives = 63/115 (54.78%), Query Frame = 3 Query: 129 PKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPF--TFATTLEQEYRSDIFGERGILLGAVHGIVESLFRRFTENGMNEDLAYKNTV 467 P ++ V V PKG G VRR + +G AG+ FA+HQD G+A ++AL + +G+ TT ++E +D+FGE+ +L G +V++ F E G +LAY T+ Sbjct: 119 PADVDVFLVAPKGPGHLVRRQFQEG-----AGVPGLFAIHQDATGQAKDLALAYGKGIGAARGGLLETTFKEETETDLFGEQAVLCGGATQLVKAGFETLVEAGYQPELAYFETL 228
BLAST of CN185908 vs. ExPASy Swiss-Prot
Match: ILVC_HYDS0 (Ketol-acid reductoisomerase OS=Hydrogenobaculum sp. (strain Y04AAS1) GN=ilvC PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.094e-12 Identity = 57/220 (25.91%), Postives = 98/220 (44.55%), Query Frame = 3 Query: 129 PKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFT--FATTLEQEYRSDIFGERGILLGAVHGIVESLFRRFTENGMNEDLAYKNTVECI--TGIISKIISTQGMLAVYNSFSGEDKKEFEKAYSASYYPCMEILYECYEDVAAGSEIRSVVL---AGRRFYEKEGLPAFPMGKIDQTRMWKVGERVRSTRP 767 PK+I V V PKG G VR +Y +GK G+ + ++HQD G ++AL ++ +G+ TT +E +D+FGE+ +L G ++++ F E G ++AY EC+ +I +I G+ + S S K Y ++ + +++ G R +L A R Y + K + + KVG+ +R P Sbjct: 120 PKDIDVFMVAPKGPGHLVRWMYEEGK-----GVPALISIHQDATGSCRDIALAYAKGIGATRAGVIETTFREETETDLFGEQAVLCGGATALIKAGFETLVEAGYQPEMAY---FECLHELKLIVDLIYQHGIAGMRYSISDTAKYGDVTRGDRVYEAVKPLMKQMLKEIQDGEFAREWILENQANRPVYNA------LLNKDKEHLVEKVGKELRQMMP 325
BLAST of CN185908 vs. ExPASy Swiss-Prot
Match: ILVC_DESVM (Ketol-acid reductoisomerase OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=ilvC PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.094e-12 Identity = 43/141 (30.50%), Postives = 73/141 (51.77%), Query Frame = 3 Query: 129 PKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFT--FATTLEQEYRSDIFGERGILLGAVHGIVESLFRRFTENGMNEDLAYKNTVECI--TGIISKIISTQGMLAVYNSFS 539 PK++ V + PKG G VRR Y +G G+ A+HQD G+A AL ++ +G + TT ++E +D+FGE+ +L G + ++++ F E G ++AY EC+ +I +I G+ + +S S Sbjct: 119 PKDVDVFMIAPKGPGHLVRRTYTEG-----GGVPCLVAIHQDATGKAMEKALAYAKGVGGARSGVIETTFKEETETDLFGEQAVLCGGLSSLIKAGFETLVEAGYQPEIAY---FECLHEVKLIVDLIYEGGLAKMRHSIS 251
BLAST of CN185908 vs. ExPASy Swiss-Prot
Match: ILVC_DESDA (Ketol-acid reductoisomerase OS=Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949) GN=ilvC PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.094e-12 Identity = 59/222 (26.58%), Postives = 105/222 (47.30%), Query Frame = 3 Query: 129 PKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFT--FATTLEQEYRSDIFGERGILLGAVHGIVESLFRRFTENGMNEDLAYKNTVECI--TGIISKIISTQGMLAVYNSFSGEDKKEFEKAYSASYYPCMEILYE---CYEDVAAGSEIRSVVLAGRRFYEKEGLPAFPMGKIDQT--RMWKVGERVRSTRP 767 PK++ V + PKG G VRR Y +G G+ A+ QD G+A +AL ++ +G + TT +E +D+FGE+ +L G V ++++ F E G ++AY EC+ +I ++ G+ + S S + E+ + E+ E +D+ +G R+ +L R Y P F + +++ ++ KVG+ +RS P Sbjct: 119 PKDVDVFLIAPKGPGHLVRRTYTEG-----GGVPCLVAIEQDATGKALQMALAYAKGVGGARSGVIETTFREETETDLFGEQAVLCGGVSALIKAGFETLVEAGYQPEMAY---FECLHEMKLIVDLMYEGGLSRMRYSIS--NTAEYGDYVTGPRLVTDEVKKEMKAVLKDIQSGVFARNFILEARAKY-----PMFLTTRRNESEHQIEKVGKELRSMMP 325
BLAST of CN185908 vs. ExPASy Swiss-Prot
Match: ILVC_CAMC5 (Ketol-acid reductoisomerase OS=Campylobacter curvus (strain 525.92) GN=ilvC PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.094e-12 Identity = 43/118 (36.44%), Postives = 63/118 (53.39%), Query Frame = 3 Query: 129 PKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFT--FATTLEQEYRSDIFGERGILLGAVHGIVESLFRRFTENGMNEDLAYKNTVECI 476 PKNI VI + PK G +VR +V+G GI AV QD G+A +AL ++ A+G T TT + E +D+FGE+ +L G + +V + F E G ++AY EC+ Sbjct: 121 PKNIDVIMIAPKAPGHTVRSEFVRG-----GGIPDLIAVEQDASGQAKQIALSYASAIGGGRTGIIETTFKDETETDLFGEQAVLCGGLCALVNAGFETLVEAGYEPEMAY---FECL 230
BLAST of CN185908 vs. ExPASy Swiss-Prot
Match: ILVC_RHOFD (Ketol-acid reductoisomerase OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=ilvC PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.041e-12 Identity = 56/222 (25.23%), Postives = 100/222 (45.05%), Query Frame = 3 Query: 117 GLDFPK-NIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVAL--GSPFTFATTLEQEYRSDIFGERGILLGAVHGIVESLFRRFTENGMNEDLAYKNTVECITGIISKIISTQGMLAVYNSFSGEDKKEFEKAYSASYYPCMEILYECYEDVAAGSEIRSVVLAGRRFYEKEGLPAFPMGK--IDQTRMWKVGERVRSTRP 767 GL P+ ++ V V PK G +VR YVQG G+ A+HQD GR ++AL +++A G TT +E +D+FGE+ +L G ++++ F E G ++AY + + I+ I Y+ + + E+ + + +C +D+ G +S +L K G P + + ++ +VGE++R+ P Sbjct: 114 GLVTPRADLDVWMVAPKAPGHTVRGTYVQG-----GGVPQLIAIHQDKSGRTRDLALSYAMANGGGKAGIIETTFREETETDLFGEQAVLCGGTVELIKAGFETLVEAGYAPEMAYFECLHELKLIVDMIYEGGIANMNYSISNNAEYGEYVTGPKIITSASKDAMRQCLKDIQTGEYAKSFILE-----NKAGAPTLLSRRRLTSEHQIEQVGEKLRAMMP 325
BLAST of CN185908 vs. ExPASy Swiss-Prot
Match: ILVC_DESVV (Ketol-acid reductoisomerase OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=ilvC PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.041e-12 Identity = 60/222 (27.03%), Postives = 100/222 (45.05%), Query Frame = 3 Query: 129 PKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFT--FATTLEQEYRSDIFGERGILLGAVHGIVESLFRRFTENGMNEDLAYKNTVECI--TGIISKIISTQGMLAVYNSFSGEDKKEFEKAYSASYYPCMEI---LYECYEDVAAGSEIRSVVLAGRRFYEKEGLPAFPMGK--IDQTRMWKVGERVRSTRP 767 PK++ V + PKG G VRR Y +G G+ AVHQD G+A AL ++ +G + TT +E +D+FGE+ +L G + ++++ F E G ++AY EC+ +I +I G+ + S S D E+ + E + + D+ G+ R+ +L K G P F + + ++ KVG +R P Sbjct: 119 PKDVDVFMIAPKGPGHLVRRTYTEG-----GGVPCLVAVHQDATGKAMEKALAYAKGVGGSRSGVIETTFREETETDLFGEQAVLCGGLSSLIKAGFETLVEAGYQPEIAY---FECLHEVKLIVDLIYEGGLERMRYSIS--DTAEYGDYVTGKRIVTEETKKEMKKVLRDIQDGTFARNFILEA-----KAGYPGFKATRRLEAEHQIEKVGGELRGMMP 325
BLAST of CN185908 vs. ExPASy Swiss-Prot
Match: ILVC_DESVH (Ketol-acid reductoisomerase OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=ilvC PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.041e-12 Identity = 60/222 (27.03%), Postives = 100/222 (45.05%), Query Frame = 3 Query: 129 PKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFT--FATTLEQEYRSDIFGERGILLGAVHGIVESLFRRFTENGMNEDLAYKNTVECI--TGIISKIISTQGMLAVYNSFSGEDKKEFEKAYSASYYPCMEI---LYECYEDVAAGSEIRSVVLAGRRFYEKEGLPAFPMGK--IDQTRMWKVGERVRSTRP 767 PK++ V + PKG G VRR Y +G G+ AVHQD G+A AL ++ +G + TT +E +D+FGE+ +L G + ++++ F E G ++AY EC+ +I +I G+ + S S D E+ + E + + D+ G+ R+ +L K G P F + + ++ KVG +R P Sbjct: 119 PKDVDVFMIAPKGPGHLVRRTYTEG-----GGVPCLVAVHQDATGKAMEKALAYAKGVGGSRSGVIETTFREETETDLFGEQAVLCGGLSSLIKAGFETLVEAGYQPEIAY---FECLHEVKLIVDLIYEGGLERMRYSIS--DTAEYGDYVTGKRIVTEETKKEMKKVLRDIQDGTFARNFILEA-----KAGYPGFKATRRLEAEHQIEKVGGELRGMMP 325
BLAST of CN185908 vs. ExPASy Swiss-Prot
Match: ILVC_CARHZ (Ketol-acid reductoisomerase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=ilvC PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.041e-12 Identity = 40/118 (33.90%), Postives = 66/118 (55.93%), Query Frame = 3 Query: 129 PKNIGVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATNVALGWSVALGSPFT--FATTLEQEYRSDIFGERGILLGAVHGIVESLFRRFTENGMNEDLAYKNTVECI 476 P ++ V V PK G VRR+Y++GK G+ AV+QD G+A ++AL ++ +G F TT ++E +D+FGE+ +L G V ++++ F E G ++AY EC+ Sbjct: 120 PPDVDVFLVAPKSPGHLVRRMYLEGK-----GVPGLIAVYQDATGKAKDLALAYAKGIGCTRAGVFETTFKEETETDLFGEQAVLCGGVTHLIKAGFETLVEAGYAPEMAY---FECL 229 The following BLAST results are available for this feature:
BLAST of CN185908 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 213
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185908 ID=CN185908; Name=CN185908; organism=Citrus sinensis; type=EST; length=771bpback to top |