CN185902

Overview
NameCN185902
Unique NameCN185902
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length779
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185902 vs. ExPASy Swiss-Prot
Match: WRK33_ARATH (Probable WRKY transcription factor 33 OS=Arabidopsis thaliana GN=WRKY33 PE=1 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 2.159e-21
Identity = 45/73 (61.64%), Postives = 53/73 (72.60%), Query Frame = 1
Query:  370 PRYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTKDEGVVVTTYEGMHSHPI 588
            PR   QT S +DILDDGYRWRKYGQK VK N  PRSYY+CT  GC V+K V+R + D   V+TTYEG H+H +
Sbjct:  348 PRIVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTTIGCPVRKHVERASHDMRAVITTYEGKHNHDV 420          

HSP 2 Score: 72.0182 bits (175), Expect = 4.081e-12
Identity = 31/63 (49.21%), Postives = 43/63 (68.25%), Query Frame = 1
Query:  412 DDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTKDEGVVVTTYEGMHSHPIERST 600
            +DGY WRKYGQK VK ++ PRSYY+CT   C  KK+V+R  + + +    Y+G H+HP  +ST
Sbjct:  184 EDGYNWRKYGQKQVKGSENPRSYYKCTFPNCPTKKKVERSLEGQ-ITEIVYKGSHNHPKPQST 245          
BLAST of CN185902 vs. ExPASy Swiss-Prot
Match: WRK26_ARATH (Probable WRKY transcription factor 26 OS=Arabidopsis thaliana GN=WRKY26 PE=2 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 2.159e-21
Identity = 46/73 (63.01%), Postives = 52/73 (71.23%), Query Frame = 1
Query:  370 PRYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTKDEGVVVTTYEGMHSHPI 588
            PR   QT S +DILDDGYRWRKYGQK VK N  PRSYY+CT  GC V+K V+R  +D   V+TTYEG H H I
Sbjct:  220 PRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTFTGCFVRKHVERAFQDPKSVITTYEGKHKHQI 292          

HSP 2 Score: 72.0182 bits (175), Expect = 4.081e-12
Identity = 30/63 (47.62%), Postives = 42/63 (66.67%), Query Frame = 1
Query:  412 DDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTKDEGVVVTTYEGMHSHPIERST 600
            DDGY WRKYGQK VK ++ PRSY++CT+  C  KK+V+       ++   Y+G H+HP  +ST
Sbjct:  117 DDGYNWRKYGQKQVKGSENPRSYFKCTYPNCLTKKKVETSLVKGQMIEIVYKGSHNHPKPQST 179          
BLAST of CN185902 vs. ExPASy Swiss-Prot
Match: WRK68_ARATH (Probable WRKY transcription factor 68 OS=Arabidopsis thaliana GN=WRKY68 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 8.203e-21
Identity = 44/72 (61.11%), Postives = 56/72 (77.78%), Query Frame = 1
Query:  370 PRYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTKDEGVVVTTYEGMHSHP 585
            P+ +F TRS+V  LDDGY+WRKYGQK VK++ FPR+YYRCT   C+VKK+V+R   D   V+TTYEG H+HP
Sbjct:  104 PKVSFITRSEVLHLDDGYKWRKYGQKPVKDSPFPRNYYRCTTTWCDVKKRVERSFSDPSSVITTYEGQHTHP 175          
BLAST of CN185902 vs. ExPASy Swiss-Prot
Match: WRK51_ARATH (Probable WRKY transcription factor 51 OS=Arabidopsis thaliana GN=WRKY51 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.827e-20
Identity = 40/70 (57.14%), Postives = 59/70 (84.29%), Query Frame = 1
Query:  373 RYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTKDEGVVVTTYEGMHSH 582
            R AF+TRS++D++DDG++WRKYG+K+VKNN   R+YY+C+ +GC+VKK+V+R   D   V+TTYEG+H+H
Sbjct:   97 RVAFRTRSKIDVMDDGFKWRKYGKKSVKNNINKRNYYKCSSEGCSVKKRVERDGDDAAYVITTYEGVHNH 166          
BLAST of CN185902 vs. ExPASy Swiss-Prot
Match: WRK50_ARATH (Probable WRKY transcription factor 50 OS=Arabidopsis thaliana GN=WRKY50 PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.071e-20
Identity = 41/70 (58.57%), Postives = 56/70 (80.00%), Query Frame = 1
Query:  373 RYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTKDEGVVVTTYEGMHSH 582
            R AF+TRS+V++LDDG++WRKYG+K VKN+  PR+YY+C+  GC VKK+V+R   D   V+TTYEG H+H
Sbjct:  100 RVAFKTRSEVEVLDDGFKWRKYGKKMVKNSPHPRNYYKCSVDGCPVKKRVERDRDDPSFVITTYEGSHNH 169          
BLAST of CN185902 vs. ExPASy Swiss-Prot
Match: WRK34_ARATH (Probable WRKY transcription factor 34 OS=Arabidopsis thaliana GN=WRKY34 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.071e-20
Identity = 46/83 (55.42%), Postives = 55/83 (66.27%), Query Frame = 1
Query:  370 PRYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTKDEGVVVTTYEGMHSHPIERSTDNFEHI 618
            PR   QT S +DILDDGYRWRKYGQK VK N  PRSYY+CT  GC V K V+R + D   V+TTY G H+H +  +  N  H+
Sbjct:  358 PRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTANGCTVTKHVERASDDFKSVLTTYIGKHTHVVP-AARNSSHV 439          

HSP 2 Score: 73.9442 bits (180), Expect = 1.074e-12
Identity = 30/57 (52.63%), Postives = 41/57 (71.93%), Query Frame = 1
Query:  412 DDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTKDEGVVVTTYEGMHSH 582
            DDGY WRKYGQK VK +++PRSYY+CTH  C  KK+V+R +++  ++   Y G H H
Sbjct:  178 DDGYNWRKYGQKLVKGSEYPRSYYKCTHPNCEAKKKVER-SREGHIIEIIYTGDHIH 233          
BLAST of CN185902 vs. ExPASy Swiss-Prot
Match: MT3_MUSAC (Metallothionein-like protein type 3 OS=Musa acuminata PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.310e-18
Identity = 39/64 (60.94%), Postives = 48/64 (75.00%), Query Frame = -1
Query:   45 TCGNCDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCTCGS 236
            TCGNCDC D+SQCVKKG+SY  D VET+ S+V  V+V   +AAE +G CKCG  CAC +C CG+
Sbjct:    3 TCGNCDCVDKSQCVKKGNSYGIDIVETEKSYVDEVIVA-AEAAEHDGKCKCGAACACTDCKCGN 65          
BLAST of CN185902 vs. ExPASy Swiss-Prot
Match: WRKY1_ARATH (WRKY transcription factor 1 OS=Arabidopsis thaliana GN=WRKY1 PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.710e-18
Identity = 39/70 (55.71%), Postives = 52/70 (74.29%), Query Frame = 1
Query:  373 RYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTKDEGVVVTTYEGMHSH 582
            R    T++  DI++DGYRWRKYGQK+VK + +PRSYYRC+  GC VKK V+R + D  +++TTYEG H H
Sbjct:  294 RIVVHTQTLFDIVNDGYRWRKYGQKSVKGSPYPRSYYRCSSPGCPVKKHVERSSHDTKLLITTYEGKHDH 363          

HSP 2 Score: 80.1073 bits (196), Expect = 1.498e-14
Identity = 35/60 (58.33%), Postives = 42/60 (70.00%), Query Frame = 1
Query:  406 ILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTKDEGVVVTTYEGMHSHP 585
            +++DGY WRKYGQK VK N+F RSYYRCTH  C  KKQ++R    + VV T Y G H HP
Sbjct:  109 VMEDGYNWRKYGQKLVKGNEFVRSYYRCTHPNCKAKKQLERSAGGQ-VVDTVYFGEHDHP 167          
BLAST of CN185902 vs. ExPASy Swiss-Prot
Match: MT3_ACTDE (Metallothionein-like protein type 3 OS=Actinidia deliciosa GN=pKIWI503 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.710e-18
Identity = 44/65 (67.69%), Postives = 49/65 (75.38%), Query Frame = -1
Query:   51 MSDTCGNCDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCTC 245
            MSD CGNCDCAD SQCVKKG+S   D VETD S++  VV M V AAE+ G CKCG +C CVNCTC
Sbjct:    1 MSDKCGNCDCADSSQCVKKGNSI--DIVETDKSYIEDVV-MGVPAAESGGKCKCGTSCPCVNCTC 62          
BLAST of CN185902 vs. ExPASy Swiss-Prot
Match: WRK42_ARATH (Probable WRKY transcription factor 42 OS=Arabidopsis thaliana GN=WRKY42 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.470e-17
Identity = 40/79 (50.63%), Postives = 54/79 (68.35%), Query Frame = 1
Query:  373 RYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQ-GCNVKKQVQRLTKDEGVVVTTYEGMHSHPIERSTDN 606
            R + + RS+  +L DG +WRKYGQK  K N  PR+YYRCT   GC V+KQVQR  +D  +++TTYEG H+HP+  +  N
Sbjct:  279 RVSVRARSEAPMLSDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDRTILITTYEGNHNHPLPPAAMN 357          
The following BLAST results are available for this feature:
BLAST of CN185902 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 68
Match NameE-valueIdentityDescription
WRK33_ARATH2.159e-2161.64Probable WRKY transcription factor 33 OS=Arabidops... [more]
WRK26_ARATH2.159e-2163.01Probable WRKY transcription factor 26 OS=Arabidops... [more]
WRK68_ARATH8.203e-2161.11Probable WRKY transcription factor 68 OS=Arabidops... [more]
WRK51_ARATH1.827e-2057.14Probable WRKY transcription factor 51 OS=Arabidops... [more]
WRK50_ARATH4.071e-2058.57Probable WRKY transcription factor 50 OS=Arabidops... [more]
WRK34_ARATH4.071e-2055.42Probable WRKY transcription factor 34 OS=Arabidops... [more]
MT3_MUSAC1.310e-1860.94Metallothionein-like protein type 3 OS=Musa acumin... [more]
WRKY1_ARATH1.710e-1855.71WRKY transcription factor 1 OS=Arabidopsis thalian... [more]
MT3_ACTDE1.710e-1867.69Metallothionein-like protein type 3 OS=Actinidia d... [more]
WRK42_ARATH2.470e-1750.63Probable WRKY transcription factor 42 OS=Arabidops... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002A15_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002A15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185902 ID=CN185902; Name=CN185902; organism=Citrus sinensis; type=EST; length=779bp
CTTTAGCTTCTTATTTTTTGCTGCATGTGTTTGCTTATTACTGTACTACC
ACAAGTGCAGTTCACACAAGCGCAGGTGGGGCCGCACTTGCAGTTACCTT
CAGCCTCAGCAGCCTGAACGTCCATGACAACAACGGTGCTGACAAAGCTC
AAGTCAGTCTCGACGAAGTCAGCAGCATAGCTGCTTCCCTTCTTCACACA
CTGGCTCCTGTCAGCGCAGTCGCAGTTGCCGCAGGTGTCCGACATGTTGA
TTGAGCTTAGAACTTAGAACTTAAAACTGGAAATAGAGGGCTCTTTATTG
TACGAAACAGGGTCTGAAAACGGAGAGAAAATGGGAAAGATTAAAAAGGG
AGAGAAGAAGGTGAGAAAGCCAAGATATGCTTTTCAAACACGAAGCCAAG
TTGATATACTTGATGATGGCTATAGATGGCGAAAGTATGGCCAAAAAGCT
GTTAAAAACAACAAGTTTCCAAGAAGCTACTACCGATGCACGCATCAAGG
CTGCAATGTGAAGAAGCAAGTTCAACGACTAACCAAAGATGAAGGAGTTG
TGGTGACAACTTACGAAGGAATGCATTCACATCCCATCGAGAGATCAACT
GATAACTTCGAGCACATCTTGAACCAGATGCAAATCTACACTTCTTATTA
ATTCACTCCTCAACTAGCAAGCAGCAGTAAAGGGCTAGATACTTCTTAAT
ACGTTGTAAATTATCTAGCATCCATAAACTTGAACCCTCGAAATAAAATT
TCCAGAGCACTGGGCAAGATACTTCTCTA
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