CN185902

Overview
NameCN185902
Unique NameCN185902
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length779
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185902 vs. ExPASy Swiss-Prot
Match: WRKY6_ARATH (WRKY transcription factor 6 OS=Arabidopsis thaliana GN=WRKY6 PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.226e-17
Identity = 38/73 (52.05%), Postives = 52/73 (71.23%), Query Frame = 1
Query:  373 RYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCT-HQGCNVKKQVQRLTKDEGVVVTTYEGMHSHPI 588
            R + + RS+  ++ DG +WRKYGQK  K N  PR+YYRCT   GC V+KQVQR  +D  +++TTYEG H+HP+
Sbjct:  299 RVSVRARSEAPMISDGCQWRKYGQKMAKGNPCPRAYYRCTMATGCPVRKQVQRCAEDRSILITTYEGNHNHPL 371          
BLAST of CN185902 vs. ExPASy Swiss-Prot
Match: WRK31_ARATH (Probable WRKY transcription factor 31 OS=Arabidopsis thaliana GN=WRKY31 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.213e-17
Identity = 38/73 (52.05%), Postives = 52/73 (71.23%), Query Frame = 1
Query:  373 RYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQ-GCNVKKQVQRLTKDEGVVVTTYEGMHSHPI 588
            R + + RS+  ++ DG +WRKYGQK  K N  PR+YYRCT   GC V+KQVQR  +D  +++TTYEG H+HP+
Sbjct:  284 RVSVRARSEAAMISDGCQWRKYGQKMAKGNPCPRAYYRCTMAGGCPVRKQVQRCAEDRSILITTYEGNHNHPL 356          
BLAST of CN185902 vs. ExPASy Swiss-Prot
Match: WRK59_ARATH (Probable WRKY transcription factor 59 OS=Arabidopsis thaliana GN=WRKY59 PE=2 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 9.385e-17
Identity = 35/73 (47.95%), Postives = 53/73 (72.60%), Query Frame = 1
Query:  376 YAFQTRSQVD---ILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTKDEGVVVTTYEGMHSHP 585
            + F+T+S +D    LDDGY+WRKYG+K +  + FPR Y++C+   CNVKK+++R T +   ++TTYEG H+HP
Sbjct:   94 HVFKTKSSIDEKVALDDGYKWRKYGKKPITGSPFPRHYHKCSSPDCNVKKKIERDTNNPDYILTTYEGRHNHP 166          
BLAST of CN185902 vs. ExPASy Swiss-Prot
Match: WRKY9_ARATH (Probable WRKY transcription factor 9 OS=Arabidopsis thaliana GN=WRKY9 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.731e-16
Identity = 37/73 (50.68%), Postives = 51/73 (69.86%), Query Frame = 1
Query:  373 RYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCT-HQGCNVKKQVQRLTKDEGVVVTTYEGMHSHPI 588
            R + + R +   ++DG +WRKYGQK  K N  PR+YYRCT   GC V+KQVQR  +D  +++TTYEG H+HP+
Sbjct:  222 RVSVRARCETATMNDGCQWRKYGQKTAKGNPCPRAYYRCTVAPGCPVRKQVQRCLEDMSILITTYEGTHNHPL 294          
BLAST of CN185902 vs. ExPASy Swiss-Prot
Match: WRK10_ARATH (Probable WRKY transcription factor 10 OS=Arabidopsis thaliana GN=WRKY10 PE=1 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 2.731e-16
Identity = 39/71 (54.93%), Postives = 49/71 (69.01%), Query Frame = 1
Query:  373 RYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTKDEGVVVTTYEGMHSHP 585
            R   Q  S  D  +DGYRWRKYGQK VK N  PRSY++CT+  C VKK V+R   +  +VVTTY+G+H+HP
Sbjct:  294 RIILQMESDEDNPNDGYRWRKYGQKVVKGNPNPRSYFKCTNIECRVKKHVERGADNIKLVVTTYDGIHNHP 364          
BLAST of CN185902 vs. ExPASy Swiss-Prot
Match: WRK47_ARATH (Probable WRKY transcription factor 47 OS=Arabidopsis thaliana GN=WRKY47 PE=2 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 3.566e-16
Identity = 39/76 (51.32%), Postives = 51/76 (67.11%), Query Frame = 1
Query:  373 RYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQ-GCNVKKQVQRLTKDEGVVVTTYEGMHSHPIERS 597
            R + + RS    ++DG +WRKYGQK  K N  PR+YYRCT   GC V+KQVQR  +D  ++ TTYEG H+HP+  S
Sbjct:  226 RVSVRARSDATTVNDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDTTILTTTYEGNHNHPLPPS 301          
BLAST of CN185902 vs. ExPASy Swiss-Prot
Match: MT3_PRUAV (Metallothionein-like protein 1 OS=Prunus avium GN=MT1 PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.658e-16
Identity = 38/65 (58.46%), Postives = 45/65 (69.23%), Query Frame = -1
Query:   51 MSDTCGNCDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCTC 245
            MS  C NCDC+D SQC KKG S+    VET+   + TV+ MD  AAE  GNCKCGP+CACV+C C
Sbjct:    1 MSSKCSNCDCSDSSQCTKKGYSFDLVIVETENRSMDTVI-MDAPAAENGGNCKCGPSCACVDCKC 64          
BLAST of CN185902 vs. ExPASy Swiss-Prot
Match: MT3_MALDO (Metallothionein-like protein type 3 OS=Malus domestica GN=MT2 PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.658e-16
Identity = 39/66 (59.09%), Postives = 46/66 (69.70%), Query Frame = -1
Query:   48 MSDTCGNCDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCTCG 245
            MS  C NCDCAD +QCVKKG+SY    VET+   + TV V D  AAE +G CKCG  C+CV+CTCG
Sbjct:    1 MSGKCDNCDCADSTQCVKKGNSYDLVIVETENRSMDTVFV-DAPAAEHDGKCKCGTGCSCVSCTCG 65          
BLAST of CN185902 vs. ExPASy Swiss-Prot
Match: WRK61_ARATH (Probable WRKY transcription factor 61 OS=Arabidopsis thaliana GN=WRKY61 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.038e-15
Identity = 36/76 (47.37%), Postives = 53/76 (69.74%), Query Frame = 1
Query:  373 RYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCT-HQGCNVKKQVQRLTKDEGVVVTTYEGMHSHPIERS 597
            R + ++R +   ++DG +WRKYGQK  K N  PR+YYRCT    C V+KQVQR ++D  ++++TYEG H+HP+  S
Sbjct:  178 RVSVRSRCETPTMNDGCQWRKYGQKIAKGNPCPRAYYRCTIAASCPVRKQVQRCSEDMSILISTYEGTHNHPLPMS 253          
BLAST of CN185902 vs. ExPASy Swiss-Prot
Match: WRK44_ARATH (WRKY transcription factor 44 OS=Arabidopsis thaliana GN=WRKY44 PE=1 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 1.038e-15
Identity = 34/60 (56.67%), Postives = 42/60 (70.00%), Query Frame = 1
Query:  403 DILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTKDEGVVVTTYEGMHSH 582
            D L+DG+RWRKYGQK V  N +PRSYYRCT   C  +K V+R + D    +TTYEG H+H
Sbjct:  346 DSLEDGFRWRKYGQKVVGGNAYPRSYYRCTSANCRARKHVERASDDPRAFITTYEGKHNH 405          

HSP 2 Score: 70.8626 bits (172), Expect = 9.091e-12
Identity = 31/56 (55.36%), Postives = 40/56 (71.43%), Query Frame = 1
Query:  415 DGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTKDEGVVVTTYEGMHSH 582
            DGY WRKYGQK VK ++ PRSYY+CTH  C VKK+V+R  + + V    Y+G H+H
Sbjct:  166 DGYNWRKYGQKQVKGSECPRSYYKCTHPKCPVKKKVERSVEGQ-VSEIVYQGEHNH 220          
The following BLAST results are available for this feature:
BLAST of CN185902 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 68
Match NameE-valueIdentityDescription
WRKY6_ARATH3.226e-1752.05WRKY transcription factor 6 OS=Arabidopsis thalian... [more]
WRK31_ARATH4.213e-1752.05Probable WRKY transcription factor 31 OS=Arabidops... [more]
WRK59_ARATH9.385e-1747.95Probable WRKY transcription factor 59 OS=Arabidops... [more]
WRKY9_ARATH2.731e-1650.68Probable WRKY transcription factor 9 OS=Arabidopsi... [more]
WRK10_ARATH2.731e-1654.93Probable WRKY transcription factor 10 OS=Arabidops... [more]
WRK47_ARATH3.566e-1651.32Probable WRKY transcription factor 47 OS=Arabidops... [more]
MT3_PRUAV4.658e-1658.46Metallothionein-like protein 1 OS=Prunus avium GN=... [more]
MT3_MALDO4.658e-1659.09Metallothionein-like protein type 3 OS=Malus domes... [more]
WRK61_ARATH1.038e-1547.37Probable WRKY transcription factor 61 OS=Arabidops... [more]
WRK44_ARATH1.038e-1556.67WRKY transcription factor 44 OS=Arabidopsis thalia... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002A15_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002A15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185902 ID=CN185902; Name=CN185902; organism=Citrus sinensis; type=EST; length=779bp
CTTTAGCTTCTTATTTTTTGCTGCATGTGTTTGCTTATTACTGTACTACC
ACAAGTGCAGTTCACACAAGCGCAGGTGGGGCCGCACTTGCAGTTACCTT
CAGCCTCAGCAGCCTGAACGTCCATGACAACAACGGTGCTGACAAAGCTC
AAGTCAGTCTCGACGAAGTCAGCAGCATAGCTGCTTCCCTTCTTCACACA
CTGGCTCCTGTCAGCGCAGTCGCAGTTGCCGCAGGTGTCCGACATGTTGA
TTGAGCTTAGAACTTAGAACTTAAAACTGGAAATAGAGGGCTCTTTATTG
TACGAAACAGGGTCTGAAAACGGAGAGAAAATGGGAAAGATTAAAAAGGG
AGAGAAGAAGGTGAGAAAGCCAAGATATGCTTTTCAAACACGAAGCCAAG
TTGATATACTTGATGATGGCTATAGATGGCGAAAGTATGGCCAAAAAGCT
GTTAAAAACAACAAGTTTCCAAGAAGCTACTACCGATGCACGCATCAAGG
CTGCAATGTGAAGAAGCAAGTTCAACGACTAACCAAAGATGAAGGAGTTG
TGGTGACAACTTACGAAGGAATGCATTCACATCCCATCGAGAGATCAACT
GATAACTTCGAGCACATCTTGAACCAGATGCAAATCTACACTTCTTATTA
ATTCACTCCTCAACTAGCAAGCAGCAGTAAAGGGCTAGATACTTCTTAAT
ACGTTGTAAATTATCTAGCATCCATAAACTTGAACCCTCGAAATAAAATT
TCCAGAGCACTGGGCAAGATACTTCTCTA
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