CN185901

Overview
NameCN185901
Unique NameCN185901
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length760
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185901 vs. ExPASy Swiss-Prot
Match: WRK70_ARATH (Probable WRKY transcription factor 70 OS=Arabidopsis thaliana GN=WRKY70 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.350e-12
Identity = 41/104 (39.42%), Postives = 58/104 (55.77%), Query Frame = -3
Query:  312 ILDDGYRWRKYGQKAVKNNKFPRSYYRCTH---QGCNVKKQVQRLTKDEGVVVTTYEGMHS------HPIERSTDNFEHILNQMQIYTSY*FTPQLASSSKGLD 596
            IL+D + WRKYGQK + N KFPRSY+RCTH   QGC   KQVQ++  +  +   TY G H+       P  ++ D+ + I    + + S    P L++S K  D
Sbjct:  118 ILEDAFSWRKYGQKEILNAKFPRSYFRCTHKYTQGCKATKQVQKVELEPKMFSITYIGNHTCNTNAETPKSKTCDHHDEIFMDSEDHKS----PSLSTSMKEED 217          
BLAST of CN185901 vs. ExPASy Swiss-Prot
Match: WRK36_ARATH (Probable WRKY transcription factor 36 OS=Arabidopsis thaliana GN=WRKY36 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.763e-12
Identity = 33/62 (53.23%), Postives = 43/62 (69.35%), Query Frame = -3
Query:  414 LDDGYRWRKYGQKAVKNNKFPRSYYRCT-HQGCNVKKQVQRLTKDE-GVVVTTYEGMHSHPI 593
            ++DG +WRKYGQK  K N  PR+YYRC+    C V+KQVQR  ++E    +TTYEG H HP+
Sbjct:  202 INDGCQWRKYGQKTAKTNPLPRAYYRCSMSSNCPVRKQVQRCGEEETSAFMTTYEGNHDHPL 263          
BLAST of CN185901 vs. ExPASy Swiss-Prot
Match: WRK60_ARATH (Probable WRKY transcription factor 60 OS=Arabidopsis thaliana GN=WRKY60 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.007e-12
Identity = 31/57 (54.39%), Postives = 41/57 (71.93%), Query Frame = -3
Query:  420 DGYRWRKYGQKAVKNNKFPRSYYRCTHQ-GCNVKKQVQRLTKDEGVVVTTYEGMHSH 587
            DGY+WRKYGQK  ++N  PR+Y+RC+    C VKK+VQR  +D   +V TYEG H+H
Sbjct:  147 DGYQWRKYGQKITRDNPSPRAYFRCSFSPSCLVKKKVQRSAEDPSFLVATYEGTHNH 203          
BLAST of CN185901 vs. ExPASy Swiss-Prot
Match: WRK30_ARATH (Probable WRKY transcription factor 30 OS=Arabidopsis thaliana GN=WRKY30 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.007e-12
Identity = 32/60 (53.33%), Postives = 42/60 (70.00%), Query Frame = -3
Query:  423 LDDGYRWRKYGQKAVKNNKFPRSYYRCTH---QGCNVKKQVQRLTKDEGVVVTTYEGMHS 593
            LDDG+ WRKYGQK +   KFPR YYRCT+   QGC   KQVQR  +++ ++  +Y G+HS
Sbjct:  112 LDDGFSWRKYGQKDILGAKFPRGYYRCTYRKSQGCEATKQVQRSDENQMLLEISYRGIHS 171          
BLAST of CN185901 vs. ExPASy Swiss-Prot
Match: WRK21_ARATH (Probable WRKY transcription factor 21 OS=Arabidopsis thaliana GN=WRKY21 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.007e-12
Identity = 29/62 (46.77%), Postives = 42/62 (67.74%), Query Frame = -3
Query:  417 DILDDGYRWRKYGQKAVKNNKFPRSYYRCTH-QGCNVKKQVQRLTKDEGVVVTTYEGMHSHP 599
            DI  D Y WRKYGQK +K + +PR YY+C+  +GC  +K V+R  +D  +++ TYE  H+HP
Sbjct:  310 DIPPDDYSWRKYGQKPIKGSPYPRGYYKCSSMRGCPARKHVERCLEDPAMLIVTYEAEHNHP 371          
BLAST of CN185901 vs. ExPASy Swiss-Prot
Match: WRK18_ARATH (WRKY transcription factor 18 OS=Arabidopsis thaliana GN=WRKY18 PE=1 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 3.927e-12
Identity = 30/57 (52.63%), Postives = 42/57 (73.68%), Query Frame = -3
Query:  420 DGYRWRKYGQKAVKNNKFPRSYYRCTH-QGCNVKKQVQRLTKDEGVVVTTYEGMHSH 587
            DG++WRKYGQK  ++N  PR+Y+RC+    C VKK+VQR  +D  ++V TYEG H+H
Sbjct:  177 DGFQWRKYGQKVTRDNPSPRAYFRCSFAPSCPVKKKVQRSAEDPSLLVATYEGTHNH 233          
BLAST of CN185901 vs. ExPASy Swiss-Prot
Match: WRK55_ARATH (WRKY transcription factor 55 OS=Arabidopsis thaliana GN=WRKY55 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.129e-12
Identity = 32/59 (54.24%), Postives = 38/59 (64.41%), Query Frame = -3
Query:  423 DDGYRWRKYGQKAVKNNKFPRSYYRCTHQ---GCNVKKQVQRLTKDEGVVVTTYEGMHS 590
            DD + WRKYGQK +  ++FPR+YYRCTHQ    C  KKQVQRL  D      TY G H+
Sbjct:  173 DDNHTWRKYGQKEILGSRFPRAYYRCTHQKLYNCPAKKQVQRLNDDPFTFRVTYRGSHT 231          
BLAST of CN185901 vs. ExPASy Swiss-Prot
Match: WRK27_ARATH (Probable WRKY transcription factor 27 OS=Arabidopsis thaliana GN=WRKY27 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 8.749e-12
Identity = 29/65 (44.62%), Postives = 44/65 (67.69%), Query Frame = -3
Query:  417 SQVDILDDGYRWRKYGQKAVKNNKFPRSYYRC-THQGCNVKKQVQRLTKDEGVVVTTYEGMHSHP 608
            +Q ++  D + WRKYGQK +K + +PR+YYRC + +GC  +KQV+R   D  + + TY G H+HP
Sbjct:  159 TQENLSSDLWAWRKYGQKPIKGSPYPRNYYRCSSSKGCLARKQVERSNLDPNIFIVTYTGEHTHP 223          
BLAST of CN185901 vs. ExPASy Swiss-Prot
Match: WRK14_ARATH (Probable WRKY transcription factor 14 OS=Arabidopsis thaliana GN=WRKY14 PE=2 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 8.749e-12
Identity = 32/71 (45.07%), Postives = 47/71 (66.20%), Query Frame = -3
Query:  417 AFQTRSQVDIL-DDGYRWRKYGQKAVKNNKFPRSYYRC-THQGCNVKKQVQRLTKDEGVVVTTYEGMHSHP 623
            A  +RS  +++  D + WRKYGQK +K + FPR YYRC + +GC+ +KQV+R   D  ++V TY   H+HP
Sbjct:  205 AMNSRSSGEVVPSDLWAWRKYGQKPIKGSPFPRGYYRCSSSKGCSARKQVERSRTDPNMLVITYTSEHNHP 275          
BLAST of CN185901 vs. ExPASy Swiss-Prot
Match: WRKY7_ARATH (Probable WRKY transcription factor 7 OS=Arabidopsis thaliana GN=WRKY7 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.492e-11
Identity = 30/72 (41.67%), Postives = 43/72 (59.72%), Query Frame = -3
Query:  387 DILDDGYRWRKYGQKAVKNNKFPRSYYRCTH-QGCNVKKQVQRLTKDEGVVVTTYEGMHSHPIERSTDNFEH 599
            DI  D + WRKYGQK +K +  PR YY+C+  +GC  +K V+R   D  +++ TYEG H+H +   T    H
Sbjct:  278 DIPSDEFSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDAMMLIVTYEGDHNHALVLETTTMNH 349          
The following BLAST results are available for this feature:
BLAST of CN185901 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
WRK70_ARATH1.350e-1239.42Probable WRKY transcription factor 70 OS=Arabidops... [more]
WRK36_ARATH1.763e-1253.23Probable WRKY transcription factor 36 OS=Arabidops... [more]
WRK60_ARATH3.007e-1254.39Probable WRKY transcription factor 60 OS=Arabidops... [more]
WRK30_ARATH3.007e-1253.33Probable WRKY transcription factor 30 OS=Arabidops... [more]
WRK21_ARATH3.007e-1246.77Probable WRKY transcription factor 21 OS=Arabidops... [more]
WRK18_ARATH3.927e-1252.63WRKY transcription factor 18 OS=Arabidopsis thalia... [more]
WRK55_ARATH5.129e-1254.24WRKY transcription factor 55 OS=Arabidopsis thalia... [more]
WRK27_ARATH8.749e-1244.62Probable WRKY transcription factor 27 OS=Arabidops... [more]
WRK14_ARATH8.749e-1245.07Probable WRKY transcription factor 14 OS=Arabidops... [more]
WRKY7_ARATH1.492e-1141.67Probable WRKY transcription factor 7 OS=Arabidopsi... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002A15_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002A15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185901 ID=CN185901; Name=CN185901; organism=Citrus sinensis; type=EST; length=760bp
TTTTTTTTTTTTTTTCTTATGCAAATGTTTGATAGATAATAGTTAACTCT
TAATGGCCTAGAAACTGAAGTAGATTAAAAAAAAAATCCCATAAAAAGAG
AACAAAATAATGAACCAAATCACCAATGCAGGCAAGTTCTGTTTCTAAAT
TCTAATGACTGCACACAGTACAACAAACTAAAAGGCATTGCCATAAAAAT
ACAACATGTGTTCAAATTATACTAGAGAAGTATCCTGCCCAGTGCTCTGG
AAATTTTATTTCGAGGGTTCAAGTTTATGGATGCTAGATAATTTACAACG
TATTAAGAAGTATCTAGCCCTTTACTGCTGCTTGCTAGTTGAGGAGTGAA
TTAATAAGAAGTGTAGATTTGCATCTGGTTCAAGATGTGCTCGAAGTTAT
CAGTTGATCTCTCGATGGGATGTGAATGCATTCCTTCGTAAGTTGTCACC
ACAACTCCTTCATCTTTGGTTAGTCGTTGAACTTGCTTCTTCACATTGCA
GCCTTGATGCGTGCATCGGTAGTAGCTTCTTGGAAACTTGTTGTTTTTAA
CAGCTTTTTGGCCATACTTTCGCCATCTATAGCCATCATCAAGTATATCA
ACTTGGCTTCGTGTTTGAAAAGCATATCTTGGCTTTCTCACCTTCTTCTC
TCCCTTTTTAATCTTTCCCATTTTCTCTCCGTTTTCAGACCCTGTTTCGT
ACAATAAAGAGCCCTCTATTTCCAGTTTTAAGTTCTAAGTTCTAAGCTCA
ATCAACATGT
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