CN185841
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185841 vs. ExPASy Swiss-Prot
Match: RL17_MOUSE (60S ribosomal protein L17 OS=Mus musculus GN=Rpl17 PE=2 SV=3) HSP 1 Score: 155.992 bits (393), Expect = 1.625e-37 Identity = 77/111 (69.37%), Postives = 90/111 (81.08%), Query Frame = -2 Query: 302 RRAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 634 R+A +YL+DV KQ +PF R+ GGVGR AQAK QGRWP KSA+F+L +LKNAESNAE+KGLDVD+L I HIQVN+A K RRRTYRAHGRINPYMSSPCHIE+ L+ Sbjct: 42 RKATKYLKDVTLKKQCVPFRRYNGGVGRCAQAKQWGWT-QGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRTYRAHGRINPYMSSPCHIEMILT 151
BLAST of CN185841 vs. ExPASy Swiss-Prot
Match: RL17_BOVIN (60S ribosomal protein L17 OS=Bos taurus GN=RPL17 PE=2 SV=3) HSP 1 Score: 155.992 bits (393), Expect = 1.625e-37 Identity = 77/111 (69.37%), Postives = 90/111 (81.08%), Query Frame = -2 Query: 302 RRAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 634 R+A +YL+DV KQ +PF R+ GGVGR AQAK QGRWP KSA+F+L +LKNAESNAE+KGLDVD+L I HIQVN+A K RRRTYRAHGRINPYMSSPCHIE+ L+ Sbjct: 42 RKATKYLKDVTLKKQCVPFRRYNGGVGRCAQAKQWGWT-QGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRTYRAHGRINPYMSSPCHIEMILT 151
BLAST of CN185841 vs. ExPASy Swiss-Prot
Match: RL17_IXOSC (60S ribosomal protein L17 OS=Ixodes scapularis GN=RpL17 PE=2 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 2.772e-37 Identity = 78/111 (70.27%), Postives = 90/111 (81.08%), Query Frame = -2 Query: 302 RRAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 634 RRA+RYL++V+A K+ +PF RF GGVGR AQAK QGRWP KSA+F+ LL+NAESNA+ KGLDVD L I HIQVN+A K RRRTYRAHGRINPYMSSPCHIE+ LS Sbjct: 42 RRAQRYLKNVIAKKEIVPFRRFNGGVGRKAQAK-AFGCTQGRWPKKSAEFLWQLLRNAESNADYKGLDVDRLVIDHIQVNRAPKMRRRTYRAHGRINPYMSSPCHIEVILS 151
BLAST of CN185841 vs. ExPASy Swiss-Prot
Match: RL17_ARGMO (60S ribosomal protein L17 OS=Argas monolakensis GN=RpL17 PE=2 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 4.728e-37 Identity = 77/111 (69.37%), Postives = 90/111 (81.08%), Query Frame = -2 Query: 302 RRAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 634 RRA+RYL++V+A K+ +PF RF GGVGR AQAK QGRWP KSA+F+ LL+NAESNA+ KGLDVD L I HIQVN+A K RRRTYRAHGRINPYMSSPCH+E+ LS Sbjct: 42 RRAQRYLKNVIAKKEIVPFRRFNGGVGRKAQAKAWGCT-QGRWPKKSAEFLWQLLRNAESNADYKGLDVDRLVIDHIQVNRAPKMRRRTYRAHGRINPYMSSPCHVEVILS 151
BLAST of CN185841 vs. ExPASy Swiss-Prot
Match: RL17_CAEEL (60S ribosomal protein L17 OS=Caenorhabditis elegans GN=rpl-17 PE=2 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 8.065e-37 Identity = 76/111 (68.47%), Postives = 86/111 (77.48%), Query Frame = -2 Query: 302 RRAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 634 RRA+ +L V HK+ +PF RF GG+GR AQ K + QGRWPVKSA F+LDLLKNAESNAE KGLDVD L I HI V +A K RRRTYRAHGRINPYMSSPCHIE+ L+ Sbjct: 44 RRAQAFLNHVKEHKEIVPFRRFHGGIGRAAQTKQWNTT-QGRWPVKSADFLLDLLKNAESNAEYKGLDVDHLVIEHINVQRAAKLRRRTYRAHGRINPYMSSPCHIEVILA 153
BLAST of CN185841 vs. ExPASy Swiss-Prot
Match: RL17_PECGU (60S ribosomal protein L17 OS=Pectinaria gouldii GN=rpl-17 PE=2 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.376e-36 Identity = 74/109 (67.89%), Postives = 88/109 (80.73%), Query Frame = -2 Query: 305 RAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTL 631 +A+ YL +V+ HKQ IPF R GGVGR AQAKN + QGRWP KS +F+L LLKNAESNAE++GLDVD+L ++H+ V+ A K RRRTYRAHGRINPYMSSPCHIEL L Sbjct: 43 KARSYLSNVVEHKQCIPFRRHKGGVGRCAQAKNFNTT-QGRWPKKSCEFMLQLLKNAESNAELRGLDVDSLVVAHVSVDAAAKMRRRTYRAHGRINPYMSSPCHIELCL 150
BLAST of CN185841 vs. ExPASy Swiss-Prot
Match: RL17_LONON (60S ribosomal protein L17 OS=Lonomia obliqua GN=RpL17 PE=2 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 1.797e-36 Identity = 82/131 (62.60%), Postives = 92/131 (70.23%), Query Frame = -2 Query: 242 RRAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLSXXXXXXXXXXETQLATSKSK 634 RRA RYL++V K+ IPF RF GGVGR AQAK + QGRWP KSA+F L LL+NAESNA+ KGLDVD L I HIQVN+A RRRTYRAHGRINPYMSSPCHIE+ LS T A +K K Sbjct: 42 RRAVRYLKNVTEKKECIPFRRFNGGVGRCAQAK-QFGTTQGRWPKKSAEFPLQLLRNAESNADYKGLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSSPCHIEVALSEREDAVSRAAPTDDAPAKKK 171
BLAST of CN185841 vs. ExPASy Swiss-Prot
Match: RL17_PHLPP (60S ribosomal protein L17 OS=Phlebotomus papatasi GN=RpL17 PE=2 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 4.003e-36 Identity = 75/111 (67.57%), Postives = 90/111 (81.08%), Query Frame = -2 Query: 302 RRAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 634 RRA+R+L++V+ K+ +PF RF GGVGR AQAK + QGRWP KSA+F+L LL+NAESNA+ KGLDVD L I HIQVN+A RRRTYRAHGRINPYMSSPCHIE+ L+ Sbjct: 42 RRAQRFLKNVVEKKECVPFRRFNGGVGRCAQAK-QWKTTQGRWPKKSAEFLLQLLRNAESNADYKGLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSSPCHIEVILT 151
BLAST of CN185841 vs. ExPASy Swiss-Prot
Match: RL17_ANOGA (60S ribosomal protein L17 OS=Anopheles gambiae GN=RpL17 PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 4.003e-36 Identity = 75/111 (67.57%), Postives = 91/111 (81.98%), Query Frame = -2 Query: 302 RRAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 634 RRA+R+L++V+ K+ +PF RF GGVGR AQAK+ GRWP KSA+F+L LLKNAE+NA+ KGLDVD L I+HIQVN+A RRRTYRAHGRINPYMSSPCHIEL+L+ Sbjct: 42 RRAQRFLKNVIEKKECVPFRRFNGGVGRCAQAKH-WGTSVGRWPKKSAEFLLQLLKNAEANADYKGLDVDRLVINHIQVNRAPCLRRRTYRAHGRINPYMSSPCHIELSLT 151
BLAST of CN185841 vs. ExPASy Swiss-Prot
Match: RL17_BOMMO (60S ribosomal protein L17 OS=Bombyx mori GN=RpL17 PE=2 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 5.228e-36 Identity = 81/131 (61.83%), Postives = 93/131 (70.99%), Query Frame = -2 Query: 242 RRAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLSXXXXXXXXXXETQLATSKSK 634 RRA RYL++V+ K+ IPF RF GGVGR AQAK + QGRWP KSA+F+L LL+NAESNA+ K LDVD L I HIQVN+A RRRTYRAHGRINPYMSSPCHIE+ LS T A +K K Sbjct: 42 RRAVRYLKNVIEKKECIPFRRFNGGVGRCAQAK-QFGTTQGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSSPCHIEVCLSEREDAVARVAPTDDAPAKKK 171 The following BLAST results are available for this feature:
BLAST of CN185841 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 67
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185841 ID=CN185841; Name=CN185841; organism=Citrus sinensis; type=EST; length=665bpback to top |