CN185841
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185841 vs. ExPASy Swiss-Prot
Match: RL22_PYRKO (50S ribosomal protein L22P OS=Pyrococcus kodakaraensis GN=rpl22p PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.137e-13 Identity = 45/108 (41.67%), Postives = 59/108 (54.63%), Query Frame = -2 Query: 305 AKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTL 628 A RYL+DV+A K+ +P RF G K G GR+PVK AK + +L NA++NAE KGLDVD L I H ++ R RA GR P+ HIE+ + Sbjct: 48 ALRYLDDVIAKKRPVPMKRFNDSQGH----KPGKGFGPGRYPVKVAKAVKKILLNAKNNAEQKGLDVDRLKIIHAAAHRGPVLRGYIPRAFGRATPFNEQTTHIEIVV 151
BLAST of CN185841 vs. ExPASy Swiss-Prot
Match: RL22_HYPBU (50S ribosomal protein L22P OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=rpl22p PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.761e-13 Identity = 46/111 (41.44%), Postives = 64/111 (57.66%), Query Frame = -2 Query: 302 AKRYLEDVMAHKQAIPFTRFCGGVG--RTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 628 A+R+LE V ++ IP R+ G R AK + P G R+PVK+AK +L LL N +NAEVKGLD + L I HI V++ + +R RA GR P HIE+ ++ Sbjct: 45 ARRFLERVARGEEPIPVRRYSGKQAHHRGLAAKYKWPIG--RYPVKAAKILLRLLDNVTNNAEVKGLDTERLRIVHIAVHKGRVLKRWMPRAFGRATPKFKKYSHIEIVVA 153
BLAST of CN185841 vs. ExPASy Swiss-Prot
Match: RL22_METST (50S ribosomal protein L22P OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rpl22p PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.219e-13 Identity = 45/108 (41.67%), Postives = 63/108 (58.33%), Query Frame = -2 Query: 305 AKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTL 628 AK +LEDV+A K +PF R VG + K GR+PVK+A IL +L+NAE+NAE + LDV+ L + H+ N+ R T RA GR +P + HI++ L Sbjct: 47 AKAFLEDVIAKKTVVPFKRHNKKVGHRSDLKGWP---SGRYPVKAAAAILKVLENAEANAENEELDVENLKLVHVCANRGVIIRGWTPRAFGRASPSNTPTTHIQIVL 151
BLAST of CN185841 vs. ExPASy Swiss-Prot
Match: RL22_METJA (50S ribosomal protein L22P OS=Methanocaldococcus jannaschii GN=rpl22p PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.219e-13 Identity = 43/108 (39.81%), Postives = 63/108 (58.33%), Query Frame = -2 Query: 305 AKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTL 628 A ++LEDV+A ++ + F R C VG K + GR+PVK+AK IL +L++A++NAE KGL+ + L I HI N+ +R RA GR P HI++ L Sbjct: 48 AIKFLEDVIAMRRPVLFRRHCKKVGHR---KGKLGWPAGRYPVKAAKAILKILQHAKANAEYKGLNTEKLRIKHISTNKGITIKRYMPRAFGRATPKFQETVHIQVIL 152
BLAST of CN185841 vs. ExPASy Swiss-Prot
Match: RL22_METTH (50S ribosomal protein L22P OS=Methanobacterium thermoautotrophicum GN=rpl22p PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.385e-12 Identity = 44/111 (39.64%), Postives = 65/111 (58.56%), Query Frame = -2 Query: 305 RAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNG--QGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTL 631 +AK+YLE+V+ ++ + F R+ VG R NG GR+PVK+A IL +L+NAE+NAE KGLD + L I HI ++ R RA GR P+ + H+++ L Sbjct: 45 KAKKYLEEVIRMERPVAFKRYNRKVGH-----RRGLNGWASGRYPVKAAGQILKVLENAEANAEYKGLDTEKLRIIHISSHRGPVIRGWIPRAFGRATPFNTPTTHVQIVL 150
BLAST of CN185841 vs. ExPASy Swiss-Prot
Match: RL22_METKA (50S ribosomal protein L22P OS=Methanopyrus kandleri GN=rpl22p PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.385e-12 Identity = 44/109 (40.37%), Postives = 63/109 (57.80%), Query Frame = -2 Query: 305 RAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTL 631 RAK +L V+ ++A+PF + V Q R GR+P K+A+ IL +L++AE+NAE KGLD D LYI HI ++ + R RA GR P+ + HIE+ L Sbjct: 50 RAKEFLRRVIRKEEAVPFRKHKKKVPHRRQI--RPGWDAGRFPEKAAREILRVLEHAEANAEYKGLDTDRLYIKHIAAHKGRVIRGWIPRAFGRATPFNTPTTHIEVIL 156
BLAST of CN185841 vs. ExPASy Swiss-Prot
Match: RL22_THEPD (50S ribosomal protein L22P OS=Thermofilum pendens (strain Hrk 5) GN=rpl22p PE=3 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 1.809e-12 Identity = 41/106 (38.68%), Postives = 58/106 (54.72%), Query Frame = -2 Query: 311 AKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIEL 628 A+R L ++ K+++P R+ VG + G GR+PVK AK +L LL N E+NAE KGL+V+ L I H ++ K R RA GR PY H+E+ Sbjct: 45 ARRILTEIAEMKRSVPLKRYNKKVGHRSDVP-----GPGRYPVKVAKNLLKLLDNLENNAEFKGLNVENLRIVHAAAHKGMKIRNYLPRAFGRATPYYDQLVHVEI 145
BLAST of CN185841 vs. ExPASy Swiss-Prot
Match: RL22_HALWD (50S ribosomal protein L22P OS=Haloquadratum walsbyi (strain DSM 16790) GN=rpl22p PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.086e-12 Identity = 36/108 (33.33%), Postives = 65/108 (60.19%), Query Frame = -2 Query: 305 AKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTL 628 A+ YL+DV+A +Q++PF + GVG + GR+P K++K L+L++N SNA +G D +A+ I H+ ++ +++ R RA G +P+ ++ C +EL + Sbjct: 44 AESYLDDVIAQRQSVPFRQHNSGVGHRSDIDGWDA---GRYPEKASKAFLELIENVASNANEQGFDGNAMAIRHVAAHKVGERQGRKPRAFGSADPWNTTICDVELII 148
BLAST of CN185841 vs. ExPASy Swiss-Prot
Match: RL22_ARCFU (50S ribosomal protein L22P OS=Archaeoglobus fulgidus GN=rpl22p PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.264e-12 Identity = 42/106 (39.62%), Postives = 59/106 (55.66%), Query Frame = -2 Query: 311 AKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIEL 628 A++ LEDV+ K+AIPF R + A + GR+P K+AK++L +L+N E+NAE KGLDV+ L I H Q + + R RA GR P +EL Sbjct: 48 ARKLLEDVVEMKRAIPFKRH---KKKVAHRRGLEKWYAGRYPQKAAKYVLKVLRNLEANAEYKGLDVENLVIVHAQAQKGRVIERYMPRAFGRATPRFQQLTTVEL 150
BLAST of CN185841 vs. ExPASy Swiss-Prot
Match: RL22_PYRHO (50S ribosomal protein L22P OS=Pyrococcus horikoshii GN=rpl22p PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 6.875e-12 Identity = 44/108 (40.74%), Postives = 59/108 (54.63%), Query Frame = -2 Query: 305 AKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTL 628 A RYL++V+A K+ +P R+ G K G GR+PVK AK I +L NA++NAE KGLD D L I HI ++ R RA GR P+ HIE+ + Sbjct: 47 ALRYLDEVIALKRPVPLRRYNDSQGH----KPGKGFGPGRYPVKVAKAIKKVLLNAKNNAEQKGLDPDKLKIIHIAAHRGPVLRGWYPRAFGRATPFNEQTTHIEVVV 150 The following BLAST results are available for this feature:
BLAST of CN185841 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 67
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185841 ID=CN185841; Name=CN185841; organism=Citrus sinensis; type=EST; length=665bpback to top |