CN185835
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185835 vs. ExPASy Swiss-Prot
Match: EF1A_SOLLC (Elongation factor 1-alpha OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 3.703e-48 Identity = 92/116 (79.31%), Postives = 102/116 (87.93%), Query Frame = -2 Query: 249 PAREAANFTSQVIIMNHPGQIGNGYAPVLDCHPSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGXXXXXXXXXXXVETFSDYPPFGRFAVRDMRQTVAVGVIKNVEKKDPTG 596 PA+ AA+FT+QVIIMNHPGQIGNGYAPVLDCH SHIAVKF+E++TKIDRRSGKELEKEPKFLKNGDAG VETF++YPP GRFAVRDMRQTVAVGV+KNV+KKDPTG Sbjct: 321 PAKGAASFTAQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFAEYPPLGRFAVRDMRQTVAVGVVKNVDKKDPTG 436
BLAST of CN185835 vs. ExPASy Swiss-Prot
Match: EF1A1_DAUCA (Elongation factor 1-alpha OS=Daucus carota PE=3 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 3.135e-47 Identity = 94/116 (81.03%), Postives = 100/116 (86.21%), Query Frame = -2 Query: 249 PAREAANFTSQVIIMNHPGQIGNGYAPVLDCHPSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGXXXXXXXXXXXVETFSDYPPFGRFAVRDMRQTVAVGVIKNVEKKDPTG 596 PA+ AA+FTSQVIIMNHPGQIGNGYAPVLDCH SHIAVKF+EL+TKIDRRSGKELEKEPKFLKNGDAG VETF++YPP GRFAVR MRQTVAVGVIK VEKKDPTG Sbjct: 321 PAKGAASFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAELLTKIDRRSGKELEKEPKFLKNGDAGMVKMLPTKPMVVETFAEYPPLGRFAVRVMRQTVAVGVIKAVEKKDPTG 436
BLAST of CN185835 vs. ExPASy Swiss-Prot
Match: EF1A2_HORVU (Elongation factor 1-alpha OS=Hordeum vulgare GN=BLT63 PE=1 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 2.654e-46 Identity = 91/116 (78.45%), Postives = 98/116 (84.48%), Query Frame = -2 Query: 249 PAREAANFTSQVIIMNHPGQIGNGYAPVLDCHPSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGXXXXXXXXXXXVETFSDYPPFGRFAVRDMRQTVAVGVIKNVEKKDPTG 596 PA+EAANFT+QVIIMNHPGQI NGYAPVLDCH SHIAVKF+E+ TKIDRRSGKELE PKFLKNGDAG VETF+ YPP GRFAVRDMRQTVAVGVIK+VEKK+PTG Sbjct: 321 PAKEAANFTAQVIIMNHPGQISNGYAPVLDCHTSHIAVKFAEIQTKIDRRSGKELEAAPKFLKNGDAGFVKMIPTKPMVVETFAQYPPLGRFAVRDMRQTVAVGVIKSVEKKEPTG 436
BLAST of CN185835 vs. ExPASy Swiss-Prot
Match: EF1A1_HORVU (Elongation factor 1-alpha OS=Hordeum vulgare PE=1 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 2.654e-46 Identity = 91/116 (78.45%), Postives = 98/116 (84.48%), Query Frame = -2 Query: 249 PAREAANFTSQVIIMNHPGQIGNGYAPVLDCHPSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGXXXXXXXXXXXVETFSDYPPFGRFAVRDMRQTVAVGVIKNVEKKDPTG 596 PA+EAANFT+QVIIMNHPGQI NGYAPVLDCH SHIAVKF+E+ TKIDRRSGKELE PKFLKNGDAG VETF+ YPP GRFAVRDMRQTVAVGVIK+VEKK+PTG Sbjct: 321 PAKEAANFTAQVIIMNHPGQISNGYAPVLDCHTSHIAVKFAEIQTKIDRRSGKELEAAPKFLKNGDAGFVKMIPTKPMVVETFAQYPPLGRFAVRDMRQTVAVGVIKSVEKKEPTG 436
BLAST of CN185835 vs. ExPASy Swiss-Prot
Match: EF1A_TRYBB (Elongation factor 1-alpha OS=Trypanosoma brucei brucei GN=TEF1 PE=1 SV=3) HSP 1 Score: 162.925 bits (411), Expect = 1.080e-39 Identity = 80/116 (68.97%), Postives = 92/116 (79.31%), Query Frame = -2 Query: 249 PAREAANFTSQVIIMNHPGQIGNGYAPVLDCHPSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGXXXXXXXXXXXVETFSDYPPFGRFAVRDMRQTVAVGVIKNVEKKDPTG 596 P +EAA+FT+QVII+NHPGQIGNGYAPVLDCH SHIA KF+E+ +KIDRRSGKELEK PK +K+GDA VE F+DY P GRFAVRDMRQTVAVG+IK V KKD +G Sbjct: 321 PPKEAADFTAQVIILNHPGQIGNGYAPVLDCHTSHIACKFAEIESKIDRRSGKELEKAPKSIKSGDAAIVRMVPQKPMCVEVFNDYAPLGRFAVRDMRQTVAVGIIKAVTKKDGSG 436
BLAST of CN185835 vs. ExPASy Swiss-Prot
Match: EF1A_ABSGL (Elongation factor 1-alpha OS=Absidia glauca GN=TEF-1 PE=3 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.194e-38 Identity = 77/116 (66.38%), Postives = 91/116 (78.45%), Query Frame = -2 Query: 249 PAREAANFTSQVIIMNHPGQIGNGYAPVLDCHPSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGXXXXXXXXXXXVETFSDYPPFGRFAVRDMRQTVAVGVIKNVEKKDPTG 596 PA+EA +FT+QVI++NHPGQIG GYAPVLDCH +HIA KF+EL+ KIDRRSGK+LE PKF+K+GD+ VE ++DYPP GRFAVRDMRQTVAVGVIK VEK D G Sbjct: 331 PAKEAGSFTAQVIVLNHPGQIGAGYAPVLDCHTAHIACKFAELLEKIDRRSGKKLEDAPKFVKSGDSAIVKMIPSKPMCVEAYTDYPPLGRFAVRDMRQTVAVGVIKAVEKVDKAG 446
BLAST of CN185835 vs. ExPASy Swiss-Prot
Match: EF1A2_RHIRA (Elongation factor 1-alpha OS=Rhizomucor racemosus GN=TEF-2 PE=3 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.194e-38 Identity = 77/116 (66.38%), Postives = 91/116 (78.45%), Query Frame = -2 Query: 249 PAREAANFTSQVIIMNHPGQIGNGYAPVLDCHPSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGXXXXXXXXXXXVETFSDYPPFGRFAVRDMRQTVAVGVIKNVEKKDPTG 596 PA+E+A+FT+QVII+NHPGQI GYAPVLDCH +HIA KFSEL+ KIDRRSGK++E PKF+K+GD+ VE ++DYPP GRFAVRDMRQTVAVGVIK VEK D G Sbjct: 331 PAKESASFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFSELIEKIDRRSGKKMEDSPKFVKSGDSAIVKMVPSKPMCVEAYTDYPPLGRFAVRDMRQTVAVGVIKAVEKVDKAG 446
BLAST of CN185835 vs. ExPASy Swiss-Prot
Match: EF1A1_RHIRA (Elongation factor 1-alpha OS=Rhizomucor racemosus GN=TEF-1 PE=3 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.194e-38 Identity = 77/116 (66.38%), Postives = 91/116 (78.45%), Query Frame = -2 Query: 249 PAREAANFTSQVIIMNHPGQIGNGYAPVLDCHPSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGXXXXXXXXXXXVETFSDYPPFGRFAVRDMRQTVAVGVIKNVEKKDPTG 596 PA+E+A+FT+QVII+NHPGQI GYAPVLDCH +HIA KFSEL+ KIDRRSGK++E PKF+K+GD+ VE ++DYPP GRFAVRDMRQTVAVGVIK VEK D G Sbjct: 331 PAKESASFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFSELIEKIDRRSGKKMEDSPKFVKSGDSAIVKMVPSKPMCVEAYTDYPPLGRFAVRDMRQTVAVGVIKAVEKVDKAG 446
BLAST of CN185835 vs. ExPASy Swiss-Prot
Match: EF1A0_XENLA (Elongation factor 1-alpha, somatic form OS=Xenopus laevis GN=eef1as PE=2 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.194e-38 Identity = 80/112 (71.43%), Postives = 88/112 (78.57%), Query Frame = -2 Query: 261 PAREAANFTSQVIIMNHPGQIGNGYAPVLDCHPSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGXXXXXXXXXXXVETFSDYPPFGRFAVRDMRQTVAVGVIKNVEKK 596 P EA +FT+QVII+NHPGQIG GYAPVLDCH +HIA KF+EL KIDRRSGK+LE PKFLK+GDA VE+FSDYPP GRFAVRDMRQTVAVGVIK VEKK Sbjct: 333 PPMEAGSFTAQVIILNHPGQIGAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDNPKFLKSGDAAIVDMIPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGVIKAVEKK 444
BLAST of CN185835 vs. ExPASy Swiss-Prot
Match: EF1A3_XENLA (Elongation factor 1-alpha, oocyte form OS=Xenopus laevis PE=1 SV=2) HSP 1 Score: 157.918 bits (398), Expect = 3.474e-38 Identity = 78/112 (69.64%), Postives = 88/112 (78.57%), Query Frame = -2 Query: 261 PAREAANFTSQVIIMNHPGQIGNGYAPVLDCHPSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGXXXXXXXXXXXVETFSDYPPFGRFAVRDMRQTVAVGVIKNVEKK 596 P +A +FT+QVII+NHPGQI GYAPVLDCH +HIA KF+EL KIDRRSGK+LE +PKFLK+GDA VETFSDYPP GRFAVRDMRQTVAVGVIK V+KK Sbjct: 333 PPMQAGSFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKQKIDRRSGKKLEDDPKFLKSGDAAIVEMIPGKPMCVETFSDYPPLGRFAVRDMRQTVAVGVIKGVDKK 444 The following BLAST results are available for this feature:
BLAST of CN185835 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 163
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185835 ID=CN185835; Name=CN185835; organism=Citrus sinensis; type=EST; length=597bpback to top |