CN185835
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185835 vs. ExPASy Swiss-Prot
Match: EF1A_CRYPV (Elongation factor 1-alpha OS=Cryptosporidium parvum PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 8.855e-34 Identity = 66/115 (57.39%), Postives = 86/115 (74.78%), Query Frame = -2 Query: 252 PAREAANFTSQVIIMNHPGQIGNGYAPVLDCHPSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGXXXXXXXXXXXVETFSDYPPFGRFAVRDMRQTVAVGVIKNVEKKDPT 596 PA+ +FT+QVI++NHPG+I NGY+PV+DCH +HI+ KF + K+D+RSGK LE+ PK +K+GDA VE F+DYPP GRFAVRDM+QTVAVGVIK+V KK+ T Sbjct: 317 PAKGCEDFTAQVIVLNHPGEIKNGYSPVVDCHTAHISCKFQTITAKMDKRSGKVLEENPKLIKSGDAALVVMQPLKPLCVEAFTDYPPLGRFAVRDMKQTVAVGVIKSVTKKEAT 431
BLAST of CN185835 vs. ExPASy Swiss-Prot
Match: EF1A_BOMMO (Elongation factor 1-alpha OS=Bombyx mori PE=2 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 2.576e-33 Identity = 68/116 (58.62%), Postives = 84/116 (72.41%), Query Frame = -2 Query: 249 PAREAANFTSQVIIMNHPGQIGNGYAPVLDCHPSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGXXXXXXXXXXXVETFSDYPPFGRFAVRDMRQTVAVGVIKNVEKKDPTG 596 P + AA+FT+QVI++NHPGQI NGY PVLDCH +HIA KF+E+ K+DRR+GK E PK +K+GDA VE+F ++PP GRFAVRDMRQTVAVGVIK V K+ G Sbjct: 333 PPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAVNFKEAGG 448
BLAST of CN185835 vs. ExPASy Swiss-Prot
Match: EF1A1_EUPCR (Elongation factor 1-alpha 1 OS=Euplotes crassus GN=EFA1 PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 1.670e-32 Identity = 67/112 (59.82%), Postives = 80/112 (71.43%), Query Frame = -2 Query: 261 PAREAANFTSQVIIMNHPGQIGNGYAPVLDCHPSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGXXXXXXXXXXXVETFSDYPPFGRFAVRDMRQTVAVGVIKNVEKK 596 PA + +F S I+MNHPG+I GY PV+DCH +HIA KF EL+TK D+RSGK E+ PKFLK GDAG VETF+ Y P GRFAVRDMRQTVAVGVI+ ++KK Sbjct: 321 PATDTESFVSHTIVMNHPGEIKAGYTPVIDCHTAHIACKFEELLTKADKRSGKMTEENPKFLKAGDAGLIRLSPSKPLCVETFATYAPLGRFAVRDMRQTVAVGVIQEIKKK 432
BLAST of CN185835 vs. ExPASy Swiss-Prot
Match: EF1A_PLAFK (Elongation factor 1-alpha OS=Plasmodium falciparum (isolate K1 / Thailand) GN=MEF-1 PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.082e-31 Identity = 61/113 (53.98%), Postives = 85/113 (75.22%), Query Frame = -2 Query: 258 PAREAANFTSQVIIMNHPGQIGNGYAPVLDCHPSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGXXXXXXXXXXXVETFSDYPPFGRFAVRDMRQTVAVGVIKNVEKKD 596 PA+ + FT+QVII+NHPG+I NGY P+LDCH SHI+ KF + +KID+RSGK +E+ PK +K+GD+ VETF++YPP GRFA+RDMRQT+AVG+I +++K+ Sbjct: 319 PAKGCSKFTAQVIILNHPGEIKNGYTPLLDCHTSHISCKFLNIDSKIDKRSGKVVEENPKAIKSGDSALVSLEPKKPMVVETFTEYPPLGRFAIRDMRQTIAVGIINQLKRKN 431
BLAST of CN185835 vs. ExPASy Swiss-Prot
Match: EF1A_ENTHI (Elongation factor 1-alpha OS=Entamoeba histolytica PE=2 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 5.372e-31 Identity = 66/110 (60.00%), Postives = 81/110 (73.64%), Query Frame = -2 Query: 270 PAREAANFTSQVIIMNHPGQIGNGYAPVLDCHPSHIAVKFSELVTKIDRRSGKELE-KEPKFLKNGDAGXXXXXXXXXXXVETFSDYPPFGRFAVRDMRQTVAVGVIKNV 596 PA +FT+QVI+MNHPGQI GY PVLDCH SHIA KF EL++KIDRR+GK +E EP+++KNGD+ VE F+ +PP GRFAVRDM+QTVAVGV+K V Sbjct: 319 PAVGCEDFTAQVIVMNHPGQIRKGYTPVLDCHTSHIACKFEELLSKIDRRTGKSMEGGEPEYIKNGDSALVKIVPTKPLCVEEFAKFPPLGRFAVRDMKQTVAVGVVKAV 428
BLAST of CN185835 vs. ExPASy Swiss-Prot
Match: EF1A1_XENLA (Elongation factor 1-alpha OS=Xenopus laevis PE=1 SV=2) HSP 1 Score: 134.035 bits (336), Expect = 5.372e-31 Identity = 65/112 (58.04%), Postives = 81/112 (72.32%), Query Frame = -2 Query: 261 PAREAANFTSQVIIMNHPGQIGNGYAPVLDCHPSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGXXXXXXXXXXXVETFSDYPPFGRFAVRDMRQTVAVGVIKNVEKK 596 P EA++FT+QVII+NHPG I GY+PV+DCH +HI +F+EL KIDRR+GK+LE P LK+GDA VE F DYPP GRFA RD++QTVAVGV+K+VE K Sbjct: 336 PPTEASSFTAQVIILNHPGFIKAGYSPVIDCHTAHITCQFAELQEKIDRRTGKKLEDNPGLLKSGDAAIITLKPIKPFCVERFFDYPPLGRFAARDLKQTVAVGVVKSVEHK 447
BLAST of CN185835 vs. ExPASy Swiss-Prot
Match: EF1A_DICDI (Elongation factor 1-alpha OS=Dictyostelium discoideum GN=eef1a1 PE=1 SV=2) HSP 1 Score: 132.88 bits (333), Expect = 1.197e-30 Identity = 67/117 (57.26%), Postives = 82/117 (70.09%), Query Frame = -2 Query: 255 PAREAANFTSQVIIMNHPGQIGNGYAPVLDCHPSHIAVKFSELVTKIDRRSGKELEKE---PKFLKNGDAGXXXXXXXXXXXVETFSDYPPFGRFAVRDMRQTVAVGVIKNVEKKDP 596 P +E F +QVI++NHPGQI GY+PVLDCH +HIA KF+E+V K+DRR+G + KE LKNGDA VE+F++YPP GRFAVRDMRQTVAVGVIK+ KK P Sbjct: 321 PPQETEKFVAQVIVLNHPGQIHAGYSPVLDCHTAHIACKFTEIVDKVDRRTGAVVAKEGTAAVVLKNGDAAMVELTPSRPMCVESFTEYPPLGRFAVRDMRQTVAVGVIKSTVKKAP 437
BLAST of CN185835 vs. ExPASy Swiss-Prot
Match: EF1A2_EUPCR (Elongation factor 1-alpha 2 OS=Euplotes crassus GN=EFA2 PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 3.984e-26 Identity = 58/115 (50.43%), Postives = 76/115 (66.09%), Query Frame = -2 Query: 252 PAREAANFTSQVIIMNHPGQIGNGYAPVLDCHPSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGXXXXXXXXXXXVETFSDYPPFGRFAVRDMRQTVAVGVIKNVEKKDPT 596 P + A +F +QVI+MNHPG I GY PVLD H +H+A KF L++K + R+GK +E+ PKFLKNG++G VE FS Y GRF +RDM++TVAVGVI+ V K T Sbjct: 318 PPKNAESFIAQVIVMNHPGHIKAGYQPVLDIHTAHVATKFKTLLSKNEARTGKLIEEAPKFLKNGESGIVELVPTKPLCVEEFSKYAALGRFVIRDMKRTVAVGVIQEVIHKKET 432
BLAST of CN185835 vs. ExPASy Swiss-Prot
Match: EF1A_BLAHO (Elongation factor 1-alpha OS=Blastocystis hominis PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 5.203e-26 Identity = 55/99 (55.56%), Postives = 72/99 (72.73%), Query Frame = -2 Query: 273 SQVIIMNHPGQIGNGYAPVLDCHPSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGXXXXXXXXXXXVETFSDYPPFGRFAVRDMRQTVAVGVIKN 569 +QVI+MNHP I GY PV+DCH +HIA KF ++++++D+R+GK L + P +KNG + VETFSDYPP GRFAVRDMRQTVAVG+IK+ Sbjct: 331 AQVIVMNHPSGIRPGYCPVVDCHTAHIACKFEKIMSEMDKRTGKVLRENPDIVKNGKSMMAQLVPSKPMCVETFSDYPPLGRFAVRDMRQTVAVGIIKS 429
BLAST of CN185835 vs. ExPASy Swiss-Prot
Match: EF1A_SPOFR (Elongation factor 1-alpha (Fragment) OS=Spodoptera frugiperda PE=1 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 8.875e-26 Identity = 53/95 (55.79%), Postives = 68/95 (71.58%), Query Frame = -2 Query: 312 PAREAANFTSQVIIMNHPGQIGNGYAPVLDCHPSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGXXXXXXXXXXXVETFSDYPPFGRFAVR 596 P + AA+FT+QVI++NHPGQI NGY PVLDCH +HIA KF+E+ K+DRR+GK E PK +K+GDA VE+F ++PP GRFAVR Sbjct: 319 PPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVR 413 The following BLAST results are available for this feature:
BLAST of CN185835 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 163
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185835 ID=CN185835; Name=CN185835; organism=Citrus sinensis; type=EST; length=597bpback to top |