CN185812

Overview
NameCN185812
Unique NameCN185812
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length752
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185812 vs. ExPASy Swiss-Prot
Match: SUB2_MAGGR (ATP-dependent RNA helicase SUB2 OS=Magnaporthe grisea GN=SUB2 PE=3 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 4.817e-63
Identity = 127/195 (65.13%), Postives = 149/195 (76.41%), Query Frame = 2
Query:  188 AQAPDSVATK----ANGEAAKKG-YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTELNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDM 751
            A A DS   K    A G   KKG YVGIHS+GFRDFLLKPELLRAI D GFEHPSEVQ  CIPQA+LG D+ICQAKSG+GKTAVFVL+TLQQ E   G+ + LV+CHTRELA+QI +E+ RFS Y+PDIK  VF+GG  I+   +LLKN+   P I+VGTPGR+ AL RDK L L +VR F+LDECDKML+ +DM
Sbjct:   22 APAADSNGKKGELAAGGNVDKKGSYVGIHSTGFRDFLLKPELLRAIGDCGFEHPSEVQQTCIPQAMLGGDIICQAKSGLGKTAVFVLTTLQQVEPVAGECSVLVMCHTRELAFQIRNEYNRFSKYMPDIKTGVFFGGTPIQKDAELLKNKETHPHIIVGTPGRLNALVRDKFLRLSSVRIFVLDECDKMLDQIDM 216          
BLAST of CN185812 vs. ExPASy Swiss-Prot
Match: SUB2_DEBHA (ATP-dependent RNA helicase SUB2 OS=Debaryomyces hansenii GN=SUB2 PE=3 SV=2)

HSP 1 Score: 241.121 bits (614), Expect = 4.817e-63
Identity = 121/191 (63.35%), Postives = 150/191 (78.53%), Query Frame = 2
Query:  194 APDSVATKA--NGEAAKKG-YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTELNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDM 751
            AP + A +   + EA KKG YVGIH++GFRDFLLKPELLRAI D GFEHPSEVQ  CIPQ+ILG DV+CQAKSG+GKTAVFVLSTLQQ +  PG+++ LV+CHTRELAYQI +E+ RFS Y+PD+K  VFYGG  I    + LKN+  CP IVV TPGR+ AL  +K + L N++ F++DECDK+LE++DM
Sbjct:   25 APSAAAGEGANDKEADKKGSYVGIHATGFRDFLLKPELLRAIGDCGFEHPSEVQQVCIPQSILGTDVLCQAKSGLGKTAVFVLSTLQQLDPVPGEISTLVICHTRELAYQIRNEYARFSKYMPDVKTEVFYGGTPITRDLEKLKNKDTCPHIVVATPGRLHALVTEKSIRLNNIKSFVIDECDKVLEAVDM 215          
BLAST of CN185812 vs. ExPASy Swiss-Prot
Match: SUB2_NEOFI (ATP-dependent RNA helicase sub2 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=sub2 PE=3 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 6.291e-63
Identity = 124/191 (64.92%), Postives = 147/191 (76.96%), Query Frame = 2
Query:  188 AQAPDSVATKANGEAAKKG-YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTELNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDM 751
            AQ      T + G   KKG YVGIHS+GFRDFLLK ELLRAI D GFEHPSEVQ  CIP AIL +DV+CQAKSG+GKTAVFVL+TL Q E  PG+ + LV+CHTRELAYQI +E+ RFS YLPD+K AVFYGG  I+   ++L N+   P IVVGTPGR+ AL R+K LSL+NV+ F+LDECDKML+ +DM
Sbjct:   32 AQDKKGDLTVSGGRPDKKGSYVGIHSTGFRDFLLKGELLRAITDCGFEHPSEVQQVCIPTAILNVDVLCQAKSGLGKTAVFVLTTLHQLEPVPGECSVLVMCHTRELAYQIKNEYARFSKYLPDVKTAVFYGGTPIQKDIEVLSNKESYPNIVVGTPGRLNALVREKKLSLRNVKAFVLDECDKMLDQIDM 222          
BLAST of CN185812 vs. ExPASy Swiss-Prot
Match: SUB2_CANGA (ATP-dependent RNA helicase SUB2 OS=Candida glabrata GN=SUB2 PE=3 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 6.291e-63
Identity = 120/187 (64.17%), Postives = 150/187 (80.21%), Query Frame = 2
Query:  200 DSVATKANGEAAKKG-YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTELNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDM 751
            ++ AT+ NGEA KKG YVGIHS+GF+DFLLKPEL RAI+D GFEHPSEVQ   IPQ+I G DV+CQAKSG+GKTAVFVLSTLQQ +  PG+V+ +V+C+ RELAYQI +E+ RFS Y+PD++ AVFYGG  I    +LLKN+   P IVV TPGR+ AL RDK + L +V++F++DECDK+LE LDM
Sbjct:   33 ENEATQENGEADKKGSYVGIHSTGFKDFLLKPELSRAIIDCGFEHPSEVQQHTIPQSIHGTDVLCQAKSGLGKTAVFVLSTLQQLDPVPGEVSVVVICNARELAYQIRNEYLRFSKYMPDVRTAVFYGGTPIAKDAELLKNKDTAPHIVVATPGRLKALVRDKMIDLSHVKNFVIDECDKVLEELDM 219          
BLAST of CN185812 vs. ExPASy Swiss-Prot
Match: SUB2_EMENI (ATP-dependent RNA helicase sub2 OS=Emericella nidulans GN=sub2 PE=3 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 1.073e-62
Identity = 122/185 (65.95%), Postives = 144/185 (77.84%), Query Frame = 2
Query:  200 DSVATKANGEAAKKG-YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTELNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESL 745
            D   T   G A KKG YVGIHS+GFRDFLLK ELLRAI D GFEHPSEVQ  CIP AIL +DV+CQAKSG+GKTAVFVL+TL Q E  PG+ + LV+CHTRELAYQI +E+ RFS YLPD+K AVFYGG  I+   ++L N+   P I+VGTPGR+ AL RDK LSL+NV+ F+LDECDKML+ +
Sbjct:   37 DGELTVTGGRADKKGSYVGIHSTGFRDFLLKGELLRAITDCGFEHPSEVQQVCIPTAILNVDVLCQAKSGLGKTAVFVLTTLHQLEPVPGECSVLVMCHTRELAYQIKNEYARFSKYLPDVKTAVFYGGTPIQKDIEVLSNKDTFPNIIVGTPGRLNALVRDKKLSLRNVKAFVLDECDKMLDQI 221          
BLAST of CN185812 vs. ExPASy Swiss-Prot
Match: SUB2_AJECN (ATP-dependent RNA helicase SUB2 OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=SUB2 PE=3 SV=2)

HSP 1 Score: 239.965 bits (611), Expect = 1.073e-62
Identity = 122/183 (66.67%), Postives = 145/183 (79.23%), Query Frame = 2
Query:  212 TKANGEAAKKG-YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTELNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLL--KNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDM 751
            T +   A KKG YVGIHS+GFRDFLLK ELLRAI D GFEHPSEVQ  CIP AIL +DV+CQAKSG+GKTAVFVL+TL Q E  PG+ + LV+CHTRELAYQI +E+ RFS YLPD+K AVFYGG  ++   +LL  K+  P IVVGTPGR+ AL RDK LSL+N++ F+LDECDKML+ +DM
Sbjct:   41 TVSGARADKKGSYVGIHSTGFRDFLLKGELLRAITDCGFEHPSEVQQVCIPTAILNVDVLCQAKSGLGKTAVFVLTTLHQLEPVPGECSILVMCHTRELAYQIKNEYARFSKYLPDVKTAVFYGGTPMQKDIELLSSKDTYPSIVVGTPGRLNALVRDKKLSLRNIKAFVLDECDKMLDQIDM 223          
BLAST of CN185812 vs. ExPASy Swiss-Prot
Match: SUB2_SCLS1 (ATP-dependent RNA helicase sub2 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=sub2 PE=3 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 1.402e-62
Identity = 120/186 (64.52%), Postives = 147/186 (79.03%), Query Frame = 2
Query:  203 SVATKANGEAAKKG-YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTELNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKN--ECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDM 751
            ++    N  AAKKG YVGIHS+GFR+FLLKPELLRAI   GFEHPSEVQ  CIPQAILG DV+CQAKSG+GKTAVFVL+TLQQ E+  G+ + LV+CHTRELAYQI +E++RF  ++PD+K+ VFYGGV I    ++LKN    P I+VGTPGR+ AL RDK L L +V+ F+LDECDKML+ +DM
Sbjct:   38 NLTVSGNAAAAKKGSYVGIHSTGFREFLLKPELLRAISWCGFEHPSEVQQVCIPQAILGTDVLCQAKSGLGKTAVFVLTTLQQVEVVAGETSVLVMCHTRELAYQIRNEYQRFCHFMPDVKIGVFYGGVPISKDVEVLKNPETHPHIIVGTPGRLNALVRDKYLRLNSVKVFVLDECDKMLDQIDM 223          
BLAST of CN185812 vs. ExPASy Swiss-Prot
Match: SUB21_VANPO (ATP-dependent RNA helicase SUB2-1 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=SUB2-1 PE=3 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 4.078e-62
Identity = 118/181 (65.19%), Postives = 146/181 (80.66%), Query Frame = 2
Query:  218 ANGEAAKKG-YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTELNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDM 751
            +NG+A KKG YVGIHS+GF+DFLLKPEL RAI+D GFEHPSEVQ   IPQ+I G DV+CQAKSG+GKTAVFVLSTLQQ +  PG+V+ +V+C+ RELAYQI +E+ RFS Y+PD+K AVFYGG  I    +LLKN+   P IVV TPGR+ AL RDK + L +V++F++DECDK+LE LDM
Sbjct:   41 SNGDAEKKGSYVGIHSTGFKDFLLKPELARAIIDCGFEHPSEVQQHTIPQSIHGTDVLCQAKSGLGKTAVFVLSTLQQLDPVPGEVSVVVICNARELAYQIRNEYLRFSKYMPDVKTAVFYGGTPINKDAELLKNKETAPHIVVATPGRLKALVRDKLIDLSHVKNFVIDECDKVLEELDM 221          
BLAST of CN185812 vs. ExPASy Swiss-Prot
Match: SUB2_ASPFU (ATP-dependent RNA helicase sub2 OS=Aspergillus fumigatus GN=sub2 PE=3 SV=1)

HSP 1 Score: 236.498 bits (602), Expect = 1.186e-61
Identity = 122/189 (64.55%), Postives = 145/189 (76.72%), Query Frame = 2
Query:  188 AQAPDSVATKANGEAAKKG-YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTELNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESL 745
            AQ      T + G   KKG YVGIHS+GFRDFLLK ELLRAI D GFEHPSEVQ  CIP AIL +DV+CQAKSG+GKTAVFVL+TL Q E  PG+ + LV+CHTRELAYQI +E+ RFS YLPD+K AVFYGG  I+   ++L N+   P IVVGTPGR+ AL R+K LSL+NV+ F+LDECDKML+ +
Sbjct:   32 AQDKKGDLTVSGGRPDKKGSYVGIHSTGFRDFLLKGELLRAITDCGFEHPSEVQQVCIPTAILNVDVLCQAKSGLGKTAVFVLTTLHQLEPVPGECSVLVMCHTRELAYQIKNEYARFSKYLPDVKTAVFYGGTPIQKDIEVLSNKESYPNIVVGTPGRLNALVREKKLSLRNVKAFVLDECDKMLDQI 220          
BLAST of CN185812 vs. ExPASy Swiss-Prot
Match: SUB2_ASPTN (ATP-dependent RNA helicase sub2 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=sub2 PE=3 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 4.509e-61
Identity = 123/191 (64.40%), Postives = 146/191 (76.44%), Query Frame = 2
Query:  188 AQAPDSVATKANGEAAKKG-YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTELNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDM 751
            A A     T   G + KKG YVGIHS+GFRDFLLK ELLRAI D GFEHPSEV   CIP AIL +DV+CQAKSG+GKTAVFVL+TL Q E  PG+ + LV+CHTRELAYQI +E+ RFS YLPD+K AVFYGG  I+   ++L N+   P IVVGTPGR+ AL R+K LSL+NV+ F+LDECDKML+ +DM
Sbjct:   32 APAKTGDLTVTGGRSDKKGSYVGIHSTGFRDFLLKGELLRAITDCGFEHPSEV---CIPTAILNVDVLCQAKSGLGKTAVFVLTTLHQLEPVPGECSVLVMCHTRELAYQIKNEYARFSKYLPDVKTAVFYGGTPIQKDIEVLSNKESYPNIVVGTPGRLNALVREKKLSLRNVKAFVLDECDKMLDQIDM 219          
The following BLAST results are available for this feature:
BLAST of CN185812 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
SUB2_MAGGR4.817e-6365.13ATP-dependent RNA helicase SUB2 OS=Magnaporthe gri... [more]
SUB2_DEBHA4.817e-6363.35ATP-dependent RNA helicase SUB2 OS=Debaryomyces ha... [more]
SUB2_NEOFI6.291e-6364.92ATP-dependent RNA helicase sub2 OS=Neosartorya fis... [more]
SUB2_CANGA6.291e-6364.17ATP-dependent RNA helicase SUB2 OS=Candida glabrat... [more]
SUB2_EMENI1.073e-6265.95ATP-dependent RNA helicase sub2 OS=Emericella nidu... [more]
SUB2_AJECN1.073e-6266.67ATP-dependent RNA helicase SUB2 OS=Ajellomyces cap... [more]
SUB2_SCLS11.402e-6264.52ATP-dependent RNA helicase sub2 OS=Sclerotinia scl... [more]
SUB21_VANPO4.078e-6265.19ATP-dependent RNA helicase SUB2-1 OS=Vanderwaltozy... [more]
SUB2_ASPFU1.186e-6164.55ATP-dependent RNA helicase sub2 OS=Aspergillus fum... [more]
SUB2_ASPTN4.509e-6164.40ATP-dependent RNA helicase sub2 OS=Aspergillus ter... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001O12_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001O12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185812 ID=CN185812; Name=CN185812; organism=Citrus sinensis; type=EST; length=752bp
GATGGCGAATTCTCTCCACTTTCAAATCTTTTTCTCCTTTTATTTTGGCT
AATTATTTTCATTTGCAGCACTCTCTCGCCAAACCCTAACCCTAAAACCC
CAACCGTTTATTCGAATACTGGCAGGAATGGGAGAGACAAGAGACAACGA
GTACGAGGATGAGCTTCTCGACTACGAGGAAGAAGATGCTCAAGCTCCCG
ATTCCGTCGCTACCAAAGCAAACGGCGAAGCCGCCAAGAAGGGCTATGTT
GGTATACACAGTTCAGGATTCAGAGACTTTCTTTTGAAGCCGGAACTTCT
TCGTGCAATTGTGGACTCAGGATTTGAGCATCCTTCAGAAGTGCAACATG
AATGCATACCTCAAGCGATTCTGGGCATGGATGTTATTTGCCAAGCTAAA
TCAGGGATGGGGAAGACTGCTGTGTTTGTTCTGTCAACTCTTCAGCAAAC
AGAGCTAAATCCAGGCCAAGTTACTGCACTTGTTTTATGTCACACTAGAG
AGTTAGCTTATCAGATCTGCCATGAGTTTGAGAGGTTCAGTACTTACCTG
CCTGATATCAAGGTTGCTGTCTTTTATGGTGGAGTTAATATAAAAATTCA
CAAAGATTTGCTGAAAAACGAATGTCCCCAAATTGTTGTCGGGACTCCTG
GAAGGATACTAGCTCTTGCTAGAGATAAAGACCTCTCTTTGAAGAATGTG
AGGCATTTTATCCTTGATGAATGCGATAAGATGCTGGAATCTCTTGACAT
GA
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