CN185812
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185812 vs. ExPASy Swiss-Prot
Match: DHH1_CANGA (ATP-dependent RNA helicase DHH1 OS=Candida glabrata GN=DHH1 PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.761e-26 Identity = 67/159 (42.14%), Postives = 94/159 (59.12%), Query Frame = 2 Query: 263 SGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTELNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKML 736 + F DF LK ELL I ++GFE PS +Q E IP AI G D++ +AK+G GKTA FV+ TL++ + ++ AL++ TRELA Q + + V GG N++ D+L+ NE ++VGTPGR+L LA K L F++DE DKML Sbjct: 31 NSFEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGTGKTAAFVIPTLEKIKPKLNKIQALIMVPTRELALQTSQVIRTLGRHC-GVSCMVTTGGTNLR--DDILRLNETVHVLVGTPGRVLDLASRKVADLSECSLFVMDEADKML 186
BLAST of CN185812 vs. ExPASy Swiss-Prot
Match: DHH1_CRYNE (ATP-dependent RNA helicase DHH1 OS=Cryptococcus neoformans GN=DHH1 PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 6.150e-26 Identity = 64/159 (40.25%), Postives = 95/159 (59.75%), Query Frame = 2 Query: 263 SGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTELNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP-QIVVGTPGRILALARDKDLSLKNVRHFILDECDKML 736 S F DF L+ ELL I +GFE PS +Q + IP A+ G D++ +AK+G GKTA F++ TL + + + AL+L TRELA Q + ++P+++V + GG ++ D+L+ + P I+VGTPGRIL L SL F++DE DK+L Sbjct: 36 SRFEDFGLRRELLMGIYTAGFERPSPIQEQAIPMALTGRDILARAKNGTGKTASFIIPTLNRINTSLSHIQALILVPTRELALQTSQVCKTLGAHIPNLQVMITTGGTTLR--DDILRLQQPVHILVGTPGRILDLGSKGIASLNKCGVFVMDEADKLL 192
BLAST of CN185812 vs. ExPASy Swiss-Prot
Match: IF4A2_CHICK (Eukaryotic initiation factor 4A-II OS=Gallus gallus GN=EIF4A2 PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 8.032e-26 Identity = 71/156 (45.51%), Postives = 88/156 (56.41%), Query Frame = 2 Query: 269 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTELNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKML 736 F D LK LLR I GFE PS +Q I I G DVI QA+SG GKTA F +S LQQ E++ + ALVL TRELA QI Y+ A GG N++ L+ E P IVVGTPGR+ + + LS K ++ F+LDE D+ML Sbjct: 35 FDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEIDLKETQALVLAPTRELAQQIQKVILALGDYMGATCHACI-GGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEML 189
BLAST of CN185812 vs. ExPASy Swiss-Prot
Match: DHH1_KLULA (ATP-dependent RNA helicase DHH1 OS=Kluyveromyces lactis GN=DHH1 PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 8.032e-26 Identity = 68/157 (43.31%), Postives = 93/157 (59.24%), Query Frame = 2 Query: 269 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTELNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKML 736 F DF LK ELL I ++GFE PS +Q E IP AI G D++ +AK+G GKTA FV+ TL++ + ++ AL++ TRELA Q + I V GG N++ D+++ NE I+VGTPGR+L LA + L FI+DE DKML Sbjct: 38 FEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAIAGKDILARAKNGTGKTAAFVIPTLEKVKPKLNKIQALIMVPTRELALQTSQVVRTLGKHC-GISCMVTTGGTNLR--DDIMRLNEPVHILVGTPGRVLDLASRRVTDLSECHLFIMDEADKML 191
BLAST of CN185812 vs. ExPASy Swiss-Prot
Match: IF4A2_RAT (Eukaryotic initiation factor 4A-II OS=Rattus norvegicus GN=Eif4a2 PE=1 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.370e-25 Identity = 71/156 (45.51%), Postives = 87/156 (55.77%), Query Frame = 2 Query: 269 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTELNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKML 736 F D LK LLR I GFE PS +Q I I G DVI QA+SG GKTA F +S LQQ E+ + ALVL TRELA QI Y+ A GG N++ L+ E P IVVGTPGR+ + + LS K ++ F+LDE D+ML Sbjct: 35 FDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACI-GGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEML 189
BLAST of CN185812 vs. ExPASy Swiss-Prot
Match: IF4A2_PONAB (Eukaryotic initiation factor 4A-II OS=Pongo abelii GN=EIF4A2 PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.370e-25 Identity = 71/156 (45.51%), Postives = 87/156 (55.77%), Query Frame = 2 Query: 269 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTELNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKML 736 F D LK LLR I GFE PS +Q I I G DVI QA+SG GKTA F +S LQQ E+ + ALVL TRELA QI Y+ A GG N++ L+ E P IVVGTPGR+ + + LS K ++ F+LDE D+ML Sbjct: 35 FDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACI-GGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEML 189
BLAST of CN185812 vs. ExPASy Swiss-Prot
Match: IF4A2_MOUSE (Eukaryotic initiation factor 4A-II OS=Mus musculus GN=Eif4a2 PE=2 SV=2) HSP 1 Score: 116.701 bits (291), Expect = 1.370e-25 Identity = 71/156 (45.51%), Postives = 87/156 (55.77%), Query Frame = 2 Query: 269 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTELNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKML 736 F D LK LLR I GFE PS +Q I I G DVI QA+SG GKTA F +S LQQ E+ + ALVL TRELA QI Y+ A GG N++ L+ E P IVVGTPGR+ + + LS K ++ F+LDE D+ML Sbjct: 35 FDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACI-GGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEML 189
BLAST of CN185812 vs. ExPASy Swiss-Prot
Match: IF4A2_HUMAN (Eukaryotic initiation factor 4A-II OS=Homo sapiens GN=EIF4A2 PE=1 SV=2) HSP 1 Score: 116.701 bits (291), Expect = 1.370e-25 Identity = 71/156 (45.51%), Postives = 87/156 (55.77%), Query Frame = 2 Query: 269 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTELNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKML 736 F D LK LLR I GFE PS +Q I I G DVI QA+SG GKTA F +S LQQ E+ + ALVL TRELA QI Y+ A GG N++ L+ E P IVVGTPGR+ + + LS K ++ F+LDE D+ML Sbjct: 35 FDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACI-GGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEML 189
BLAST of CN185812 vs. ExPASy Swiss-Prot
Match: IF4A2_BOVIN (Eukaryotic initiation factor 4A-II OS=Bos taurus GN=EIF4A2 PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.370e-25 Identity = 71/156 (45.51%), Postives = 87/156 (55.77%), Query Frame = 2 Query: 269 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTELNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKML 736 F D LK LLR I GFE PS +Q I I G DVI QA+SG GKTA F +S LQQ E+ + ALVL TRELA QI Y+ A GG N++ L+ E P IVVGTPGR+ + + LS K ++ F+LDE D+ML Sbjct: 35 FDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCHACI-GGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEML 189
BLAST of CN185812 vs. ExPASy Swiss-Prot
Match: DHH1_CRYNV (ATP-dependent RNA helicase VAD1 OS=Cryptococcus neoformans var. grubii GN=VAD1 PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.789e-25 Identity = 63/159 (39.62%), Postives = 94/159 (59.12%), Query Frame = 2 Query: 263 SGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTELNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP-QIVVGTPGRILALARDKDLSLKNVRHFILDECDKML 736 S F DF L+ ELL I +GFE PS +Q + IP A+ G D++ +AK+G GKTA F++ TL + + + AL+L TRELA Q + ++P+++V + GG ++ D+L+ + P I+VGTPGRIL L L F++DE DK+L Sbjct: 36 SRFEDFGLRRELLMGIYTAGFERPSPIQEQAIPMALTGRDILARAKNGTGKTASFIIPTLNRINTSLSHIQALILVPTRELALQTSQVCKTLGAHIPNLQVMITTGGTTLR--DDILRLQQPVHILVGTPGRILDLGSKGIAGLNKCGIFVMDEADKLL 192 The following BLAST results are available for this feature:
BLAST of CN185812 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN185812 ID=CN185812; Name=CN185812; organism=Citrus sinensis; type=EST; length=752bpback to top |