CN185812
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185812 vs. ExPASy Swiss-Prot
Match: DEAD_HAEIN (Cold-shock DEAD box protein A homolog OS=Haemophilus influenzae GN=deaD PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 3.375e-24 Identity = 65/156 (41.67%), Postives = 85/156 (54.49%), Query Frame = 2 Query: 269 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTELNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKML 736 F D L +L+A+ D GFE PS +Q CIP + G DV+ A++G GKTA F L L Q + + LV+ TRELA Q+ E F Y ++ YGG I LK + Q+VVGTPGRIL R L+L +R +LDE D+ML Sbjct: 7 FNDLGLPEFILKAVSDLGFETPSPIQQSCIPHLLNGNDVLGMAQTGSGKTAAFALPLLAQIDPSEKHPQMLVMAPTRELAIQVADACELFVKYAQGTRIVTLYGGQRYDIQLRALK-QGAQVVVGTPGRILDHIRRGTLNLSELRFIVLDEADEML 161
BLAST of CN185812 vs. ExPASy Swiss-Prot
Match: IF4A_ASPFU (ATP-dependent RNA helicase eIF4A OS=Aspergillus fumigatus GN=tif1 PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.756e-24 Identity = 67/151 (44.37%), Postives = 89/151 (58.94%), Query Frame = 2 Query: 284 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTELNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKML 736 LKPELLR + GFE PS +Q I I G DVI QA+SG GKTA F +S LQ+ + N AL+L TRELA QI ++ +I+ GG N++ L+ E PQ+VVGTPGR+ + + + L N++ FILDE D+ML Sbjct: 32 LKPELLRGVYAYGFERPSAIQQRAILPIIKGNDVIAQAQSGTGKTATFSISALQKLDPNVKGCQALILAPTRELAQQIQKVVVAIGDFM-NIECHACIGGTNVREDMKALQ-EGPQVVVGTPGRVQDMIQRRVLRTDNLKMFILDEADEML 180
BLAST of CN185812 vs. ExPASy Swiss-Prot
Match: DHH1_GIBZE (ATP-dependent RNA helicase DHH1 OS=Gibberella zeae GN=DHH1 PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.756e-24 Identity = 66/157 (42.04%), Postives = 92/157 (58.60%), Query Frame = 2 Query: 269 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTELNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP-QIVVGTPGRILALARDKDLSLKNVRHFILDECDKML 736 F +F LK +LL I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA FV+ TL++ ++ L+L TRELA Q + +L I V V GG ++ D+++ + P IVVGTPGRIL LA L FI+DE DK+L Sbjct: 44 FENFALKRDLLMGIFEAGFEKPSPIQEESIPVALTGRDILARAKNGTGKTAAFVIPTLERINPKISKIQCLILVPTRELAMQTSQVCKTLGKHL-GINVMVTTGGTGLR--DDIIRLQDPVHIVVGTPGRILDLAGKNVADLSECPMFIMDEADKLL 197
BLAST of CN185812 vs. ExPASy Swiss-Prot
Match: DHH1_CHAGB (ATP-dependent RNA helicase DHH1 OS=Chaetomium globosum GN=DHH1 PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.756e-24 Identity = 66/157 (42.04%), Postives = 93/157 (59.24%), Query Frame = 2 Query: 269 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTELNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP-QIVVGTPGRILALARDKDLSLKNVRHFILDECDKML 736 F DF LK +LL I ++GFE PS +Q E IP A++G D++ +AK+G GKTA FV+ L++ ++ L+L TRELA Q + +L I V V GG ++ D+++ + P IVVGTPGRIL LA + L FI+DE DK+L Sbjct: 13 FEDFGLKRDLLMGIFEAGFEKPSPIQEESIPVALVGRDILARAKNGTGKTAAFVIPALEKINPKVSKIQCLILVPTRELAMQTSQVCKTLGKHL-GINVMVTTGGTGLR--DDIVRLQDPVHIVVGTPGRILDLAGKQVADLSECPMFIMDEADKLL 166
BLAST of CN185812 vs. ExPASy Swiss-Prot
Match: DHH1_ASHGO (ATP-dependent RNA helicase DHH1 OS=Ashbya gossypii GN=DHH1 PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.756e-24 Identity = 64/157 (40.76%), Postives = 91/157 (57.96%), Query Frame = 2 Query: 269 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTELNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKML 736 F DF L+ ELL I ++GFE PS +Q E IP A+ D++ +AK+G GKTA FV+ TL+ + ++ AL++ TRELA Q + I V GG N++ D+++ NE ++VGTPGR+L LA K L F++DE DKML Sbjct: 31 FEDFYLRRELLMGIFEAGFERPSPIQEEAIPIALARRDILARAKNGTGKTAAFVIPTLEIVKPKVNKIQALIMVPTRELALQTSQVVRTLGKHC-GISCMVTTGGTNLR--DDIMRLNEPVHVLVGTPGRVLDLASRKVADLSECSLFVMDEADKML 184
BLAST of CN185812 vs. ExPASy Swiss-Prot
Match: DHH1_NEOFI (ATP-dependent RNA helicase dhh1 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=dhh1 PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 7.518e-24 Identity = 64/157 (40.76%), Postives = 91/157 (57.96%), Query Frame = 2 Query: 269 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTELNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKML 736 F DF +K EL+ I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA FV+ TL++ + AL+L TRELA Q + +L I V V GG + D+++ N+ I+VGTPGR+L LA L F++DE DK+L Sbjct: 49 FEDFYIKRELMMGIFEAGFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPTLERINPKSTKTQALILVPTRELALQTSQVCKTLGKHL-GINVMVTTGGTGLM--DDIIRLNDAVHILVGTPGRVLDLASKGVADLSECPTFVMDEADKLL 202
BLAST of CN185812 vs. ExPASy Swiss-Prot
Match: DHH1_ASPFU (ATP-dependent RNA helicase dhh1 OS=Aspergillus fumigatus GN=dhh1 PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 7.518e-24 Identity = 64/157 (40.76%), Postives = 91/157 (57.96%), Query Frame = 2 Query: 269 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTELNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKML 736 F DF +K EL+ I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA FV+ TL++ + AL+L TRELA Q + +L I V V GG + D+++ N+ I+VGTPGR+L LA L F++DE DK+L Sbjct: 49 FEDFYIKRELMMGIFEAGFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPTLERINPKSTKTQALILVPTRELALQTSQVCKTLGKHL-GINVMVTTGGTGLM--DDIIRLNDAVHILVGTPGRVLDLASKGVADLSECPTFVMDEADKLL 202
BLAST of CN185812 vs. ExPASy Swiss-Prot
Match: DHH1_ASPCL (ATP-dependent RNA helicase dhh1 OS=Aspergillus clavatus GN=dhh1 PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 7.518e-24 Identity = 64/157 (40.76%), Postives = 91/157 (57.96%), Query Frame = 2 Query: 269 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTELNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKML 736 F DF +K EL+ I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA FV+ TL++ + AL+L TRELA Q + +L I V V GG + D+++ N+ I+VGTPGR+L LA L F++DE DK+L Sbjct: 49 FEDFYIKRELMMGIFEAGFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPTLERINPKSTKTQALILVPTRELALQTSQVCKTLGKHL-GINVMVTTGGTGLM--DDIIRLNDAVHILVGTPGRVLDLASKGVADLSECPTFVMDEADKLL 202
BLAST of CN185812 vs. ExPASy Swiss-Prot
Match: DEAD_SHIFL (Cold-shock DEAD box protein A OS=Shigella flexneri GN=deaD PE=3 SV=2) HSP 1 Score: 110.923 bits (276), Expect = 7.518e-24 Identity = 64/156 (41.03%), Postives = 85/156 (54.49%), Query Frame = 2 Query: 269 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTELNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKML 736 F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA F L LQ + LVL TRELA Q+ FS ++ + V YGG + L+ + PQIVVGTPGR+L + L L + +LDE D+ML Sbjct: 8 FADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALR-QGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEML 162
BLAST of CN185812 vs. ExPASy Swiss-Prot
Match: DEAD_ECOLI (Cold-shock DEAD box protein A OS=Escherichia coli (strain K12) GN=deaD PE=1 SV=2) HSP 1 Score: 110.923 bits (276), Expect = 7.518e-24 Identity = 64/156 (41.03%), Postives = 85/156 (54.49%), Query Frame = 2 Query: 269 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTELNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKML 736 F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA F L LQ + LVL TRELA Q+ FS ++ + V YGG + L+ + PQIVVGTPGR+L + L L + +LDE D+ML Sbjct: 8 FADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALR-QGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEML 162 The following BLAST results are available for this feature:
BLAST of CN185812 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185812 ID=CN185812; Name=CN185812; organism=Citrus sinensis; type=EST; length=752bpback to top |