CN185811
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185811 vs. ExPASy Swiss-Prot
Match: SUB2_AJECN (ATP-dependent RNA helicase SUB2 OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=SUB2 PE=3 SV=2) HSP 1 Score: 217.624 bits (553), Expect = 6.180e-56 Identity = 105/152 (69.08%), Postives = 128/152 (84.21%), Query Frame = -1 Query: 339 KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPE-QIDTSTYM 791 KNRKLN+LLD+L+FNQV+IFVKS RA+EL+KLL ECNFPSI +HSG+SQEER+ RYK FKE NKRI VATD+ GRGIDIER+N+ INYD+P AD+YLHRVGRAGRFGTKGLAI+FVSS D ++L ++ RFEV + E P+ +D+S YM Sbjct: 290 KNRKLNELLDSLEFNQVIIFVKSTQRASELDKLLRECNFPSIAVHSGVSQEERIKRYKEFKEFNKRICVATDVFGRGIDIERINLAINYDLPADADSYLHRVGRAGRFGTKGLAISFVSSEQDQEVLKDIEKRFEVALPEYPQGGVDSSAYM 441
BLAST of CN185811 vs. ExPASy Swiss-Prot
Match: SUB2_NEOFI (ATP-dependent RNA helicase sub2 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=sub2 PE=3 SV=1) HSP 1 Score: 217.238 bits (552), Expect = 8.072e-56 Identity = 106/152 (69.74%), Postives = 128/152 (84.21%), Query Frame = -1 Query: 339 KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPE-QIDTSTYM 791 KNRKLN+LLD+L+FNQV+IFVKS RA EL+KLL ECNFPSI +HSG+SQEER+ RYK FKE NKRI VATD+ GRGIDIER+N+ INYD+P AD+YLHRVGRAGRFGTKGL+I+FVSS D +L +++ RFEV + E PE +D+STYM Sbjct: 289 KNRKLNELLDSLEFNQVIIFVKSTLRANELDKLLRECNFPSIAVHSGVSQEERIKRYKEFKEFNKRICVATDVFGRGIDIERINLAINYDLPADADSYLHRVGRAGRFGTKGLSISFVSSEEDEKVLKEIEKRFEVALPEYPEGGVDSSTYM 440
BLAST of CN185811 vs. ExPASy Swiss-Prot
Match: SUB2_MAGGR (ATP-dependent RNA helicase SUB2 OS=Magnaporthe grisea GN=SUB2 PE=3 SV=1) HSP 1 Score: 217.238 bits (552), Expect = 8.072e-56 Identity = 107/154 (69.48%), Postives = 126/154 (81.82%), Query Frame = -1 Query: 333 KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQ-IDTSTYMPS 791 KNRKLN+LLD L FNQV+IFVKS RA EL+KLL ECNFPSI +HSG+SQEER+ RYK FKE NKRI VATD+ GRGIDIER+N+ INYDMP AD+YLHRVGRAGRFGTKGLA++FV++ D ++L ++ RFEV I E P+ ID STYM S Sbjct: 283 KNRKLNELLDDLQFNQVIIFVKSTLRATELDKLLRECNFPSIAVHSGVSQEERIRRYKEFKEFNKRICVATDVFGRGIDIERINLAINYDMPADADSYLHRVGRAGRFGTKGLAVSFVTNDQDKEVLTAIEKRFEVPIPEFPKDGIDASTYMAS 436
BLAST of CN185811 vs. ExPASy Swiss-Prot
Match: SUB2_ASPFU (ATP-dependent RNA helicase sub2 OS=Aspergillus fumigatus GN=sub2 PE=3 SV=1) HSP 1 Score: 217.238 bits (552), Expect = 8.072e-56 Identity = 106/152 (69.74%), Postives = 128/152 (84.21%), Query Frame = -1 Query: 339 KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPE-QIDTSTYM 791 KNRKLN+LLD+L+FNQV+IFVKS RA EL+KLL ECNFPSI +HSG+SQEER+ RYK FKE NKRI VATD+ GRGIDIER+N+ INYD+P AD+YLHRVGRAGRFGTKGL+I+FVSS D +L +++ RFEV + E PE +D+STYM Sbjct: 296 KNRKLNELLDSLEFNQVIIFVKSTLRANELDKLLRECNFPSIAVHSGVSQEERIKRYKEFKEFNKRICVATDVFGRGIDIERINLAINYDLPADADSYLHRVGRAGRFGTKGLSISFVSSEEDEKVLKEIEKRFEVALPEYPEGGVDSSTYM 447
BLAST of CN185811 vs. ExPASy Swiss-Prot
Match: SUB2_PICST (ATP-dependent RNA helicase SUB2 OS=Pichia stipitis GN=SUB2 PE=3 SV=1) HSP 1 Score: 216.853 bits (551), Expect = 1.054e-55 Identity = 103/152 (67.76%), Postives = 126/152 (82.89%), Query Frame = -1 Query: 339 KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQ-IDTSTYM 791 KNRKL+DLLD+L+FNQV+IFVKS RA ELNKLL CNFPSI +HSG+ QEER+ RY+ FKE NKRI V+TD+ GRGIDIER+N+ INYD+P+ AD YLHRVGRAGRFGTKGLAI+ V S D ++L ++Q+RF+V I E PE+ +D STYM Sbjct: 280 KNRKLSDLLDSLEFNQVIIFVKSTQRANELNKLLCSCNFPSIAVHSGLPQEERIERYRSFKEFNKRICVSTDVFGRGIDIERINLAINYDLPNEADQYLHRVGRAGRFGTKGLAISLVGSKEDEEVLEKIQSRFDVKITEFPEEGVDPSTYM 431
BLAST of CN185811 vs. ExPASy Swiss-Prot
Match: DDX39_RAT (ATP-dependent RNA helicase DDX39 OS=Rattus norvegicus GN=Ddx39 PE=2 SV=1) HSP 1 Score: 216.853 bits (551), Expect = 1.054e-55 Identity = 108/151 (71.52%), Postives = 127/151 (84.11%), Query Frame = -1 Query: 339 KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTYM 791 KNRKL DLLD L+FNQVVIFVKSV R L +LLVE NFP+I IH GM+QEERL+RY+ FK+ +RILVAT+L GRG+DIERVNIV NYDMP+ +DTYLHRV RAGRFGTKGLA+TFVS +D+ ILN VQ RFEV++ ELPE+ID STY+ Sbjct: 273 KNRKLFDLLDVLEFNQVVIFVKSVQRCMALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAVTFVSDENDAKILNDVQDRFEVNVAELPEEIDISTYI 423
BLAST of CN185811 vs. ExPASy Swiss-Prot
Match: DDX39_MOUSE (ATP-dependent RNA helicase DDX39 OS=Mus musculus GN=Ddx39 PE=2 SV=1) HSP 1 Score: 216.853 bits (551), Expect = 1.054e-55 Identity = 108/151 (71.52%), Postives = 127/151 (84.11%), Query Frame = -1 Query: 339 KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTYM 791 KNRKL DLLD L+FNQVVIFVKSV R L +LLVE NFP+I IH GM+QEERL+RY+ FK+ +RILVAT+L GRG+DIERVNIV NYDMP+ +DTYLHRV RAGRFGTKGLA+TFVS +D+ ILN VQ RFEV++ ELPE+ID STY+ Sbjct: 273 KNRKLFDLLDVLEFNQVVIFVKSVQRCMALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAVTFVSDENDAKILNDVQDRFEVNVAELPEEIDISTYI 423
BLAST of CN185811 vs. ExPASy Swiss-Prot
Match: DDX39_HUMAN (ATP-dependent RNA helicase DDX39 OS=Homo sapiens GN=DDX39 PE=1 SV=2) HSP 1 Score: 216.853 bits (551), Expect = 1.054e-55 Identity = 108/151 (71.52%), Postives = 127/151 (84.11%), Query Frame = -1 Query: 339 KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTYM 791 KNRKL DLLD L+FNQV+IFVKSV R L +LLVE NFP+I IH GM+QEERL+RY+ FK+ +RILVAT+L GRG+DIERVNIV NYDMP+ +DTYLHRV RAGRFGTKGLAITFVS +D+ ILN VQ RFEV++ ELPE+ID STY+ Sbjct: 273 KNRKLFDLLDVLEFNQVIIFVKSVQRCMALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNVAELPEEIDISTYI 423
BLAST of CN185811 vs. ExPASy Swiss-Prot
Match: SUB2_ASPCL (ATP-dependent RNA helicase sub2 OS=Aspergillus clavatus GN=sub2 PE=3 SV=1) HSP 1 Score: 216.083 bits (549), Expect = 1.798e-55 Identity = 105/152 (69.08%), Postives = 128/152 (84.21%), Query Frame = -1 Query: 339 KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPE-QIDTSTYM 791 KNRKLN+LLD+L+FNQV+IFVKS RA EL+KLL ECNFPSI +HSG+SQEER+ RYK FKE NKRI VATD+ GRGIDIER+N+ INYD+P AD+YLHRVGRAGRFGTKGL+I+FVS+ D +L +++ RFEV + E PE +D+STYM Sbjct: 289 KNRKLNELLDSLEFNQVIIFVKSTLRANELDKLLRECNFPSIAVHSGVSQEERIKRYKEFKEFNKRICVATDVFGRGIDIERINLAINYDLPADADSYLHRVGRAGRFGTKGLSISFVSNEDDEKVLKEIEKRFEVALPEYPEGGVDSSTYM 440
BLAST of CN185811 vs. ExPASy Swiss-Prot
Match: SUB2_COCIM (ATP-dependent RNA helicase SUB2 OS=Coccidioides immitis GN=SUB2 PE=3 SV=1) HSP 1 Score: 215.698 bits (548), Expect = 2.349e-55 Identity = 107/152 (70.39%), Postives = 125/152 (82.24%), Query Frame = -1 Query: 339 KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQ-IDTSTYM 791 KNRKLN+LLD L+FNQV+IFVKS RA EL+KLL ECNFPSI +HSG+SQEER+ RYK FKE NKRI VATD+ GRGIDIER+N+ INYDMP AD+YLHRVGRAGRFGTKGL+I+FVSS D L ++ RFEV + E PE+ +D STYM Sbjct: 291 KNRKLNELLDNLEFNQVIIFVKSTLRANELDKLLRECNFPSIAVHSGVSQEERIKRYKEFKEFNKRICVATDVFGRGIDIERINLAINYDMPADADSYLHRVGRAGRFGTKGLSISFVSSEDDMKTLKDIEKRFEVALPEYPEEGVDASTYM 442 The following BLAST results are available for this feature:
BLAST of CN185811 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN185811 ID=CN185811; Name=CN185811; organism=Citrus sinensis; type=EST; length=791bpback to top |