CN185811
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185811 vs. ExPASy Swiss-Prot
Match: DRS1_YEAS7 (ATP-dependent RNA helicase DRS1 OS=Saccharomyces cerevisiae (strain YJM789) GN=DRS1 PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.645e-16 Identity = 44/114 (38.60%), Postives = 64/114 (56.14%), Query Frame = -1 Query: 426 LDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSAS 767 LD ++V+FV A L ++ +H ++QE+RL FK +L+ TDL RG+DI ++ +VINYDMP S + YLHRVGR R G +G ++TFV +S Sbjct: 476 LDPTGQKRIVVFVARKETAHRLRIIMGLLGMSVGELHGSLTQEQRLDSVNKFKNLEVPVLICTDLASRGLDIPKIEVVINYDMPKSYEIYLHRVGRTARAGREGRSVTFVGESS 589
BLAST of CN185811 vs. ExPASy Swiss-Prot
Match: DED1_SCHPO (ATP-dependent RNA helicase ded1 OS=Schizosaccharomyces pombe GN=ded1 PE=1 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.645e-16 Identity = 43/100 (43.00%), Postives = 58/100 (58.00%), Query Frame = -1 Query: 441 VIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITF 740 +IFV++ A L L+ NFP+ IH +Q ER + F+ G I+VAT + RG+DI V VINYD+P D Y+HR+GR GR G G A+ F Sbjct: 434 LIFVETKRMADTLTDYLLNSNFPATSIHGDRTQRERERALELFRSGRTSIMVATAVASRGLDIPNVTHVINYDLPTDIDDYVHRIGRTGRAGNTGQAVAF 533
BLAST of CN185811 vs. ExPASy Swiss-Prot
Match: DED1_PHANO (ATP-dependent RNA helicase DED1 OS=Phaeosphaeria nodorum GN=DED1 PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.645e-16 Identity = 46/117 (39.32%), Postives = 63/117 (53.85%), Query Frame = -1 Query: 441 KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITF 791 K L D+L +IFV++ A L+ L+ FP+ IH +Q ER + F+ G ILVAT + RG+DI V V+NYD+P D Y+HR+GR GR G G+A F Sbjct: 447 KRSVLLDILHTHGAGLSLIFVETKRMADSLSDFLINQGFPATSIHGDRTQREREKALEMFRSGRCPILVATAVAARGLDIPNVTHVVNYDLPTDIDDYVHRIGRTGRAGNTGIATAF 563
BLAST of CN185811 vs. ExPASy Swiss-Prot
Match: DED1_EMENI (ATP-dependent RNA helicase ded1 OS=Emericella nidulans GN=ded1 PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.645e-16 Identity = 43/100 (43.00%), Postives = 59/100 (59.00%), Query Frame = -1 Query: 441 VIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITF 740 +IFV++ A L++ L+ FP+ IH +Q ER + F+ G ILVAT + RG+DI V VINYD+P D Y+HR+GR GR G G+A F Sbjct: 450 LIFVETKRMADALSEFLINQRFPATAIHGDRTQRERERALEMFRSGRYPILVATAVAARGLDIPNVTHVINYDLPTDIDDYVHRIGRTGRAGNTGIATAF 549
BLAST of CN185811 vs. ExPASy Swiss-Prot
Match: DEAD_MYCTU (Cold-shock DEAD box protein A homolog OS=Mycobacterium tuberculosis GN=deaD PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.645e-16 Identity = 41/115 (35.65%), Postives = 68/115 (59.13%), Query Frame = -1 Query: 435 LNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVS 779 L +L+ F +++FV++ E+ + L F + I + Q +R ++G+ ILVATD+ RG+D+ER++ V+NYD+P ++Y+HR+GR GR G G A+ FVS Sbjct: 241 LTRVLEVEPFEAMIVFVRTKQATEEIAEKLRARGFSAAAISGDVPQAQRERTITALRDGDIDILVATDVAARGLDVERISHVLNYDIPHDTESYVHRIGRTGRAGRSGAALIFVS 355
BLAST of CN185811 vs. ExPASy Swiss-Prot
Match: DDX25_MOUSE (ATP-dependent RNA helicase DDX25 OS=Mus musculus GN=Ddx25 PE=1 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 1.645e-16 Identity = 47/153 (30.72%), Postives = 86/153 (56.21%), Query Frame = -1 Query: 354 KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMP------DSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKEL-PEQID 791 K + L ++ + Q +IF ++ A L +++ + ++ E+R + + F++G +++L+ T++ RGID+++V IV+N+D+P +TYLHR+GR GRFG KGLA + +L ++Q F +IK+L PE +D Sbjct: 326 KYQALCNIYGGITIGQAIIFCQTRRNAKWLTVEMMQDGHQVSLLSGELTVEQRASIIQRFRDGKEKVLITTNVCARGIDVKQVTIVVNFDLPVNQSEEPDYETYLHRIGRTGRFGKKGLAFNMI-EVDKLPLLMKIQDHFNSNIKQLDPEDMD 477
BLAST of CN185811 vs. ExPASy Swiss-Prot
Match: DDX23_DICDI (ATP-dependent RNA helicase ddx23 OS=Dictyostelium discoideum GN=helB2 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.645e-16 Identity = 42/110 (38.18%), Postives = 65/110 (59.09%), Query Frame = -1 Query: 414 VVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDI 743 ++IFV + +L EC +HSG SQE+R +GFK+ +L+AT + RGI ++ V VIN+D+P + + Y HR+GR GR G+ GLA +F+ +D D+ Sbjct: 684 IIIFVNKKKHCDIIAPVLEECRVSYTILHSGRSQEQREAALEGFKKRKYEVLIATGVASRGIHVDGVTHVINFDIPKNIEDYTHRIGRTGRAGSAGLASSFI---TDKDV 790
BLAST of CN185811 vs. ExPASy Swiss-Prot
Match: DBP8_PHANO (ATP-dependent RNA helicase DBP8 OS=Phaeosphaeria nodorum GN=DBP8 PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.645e-16 Identity = 44/128 (34.38%), Postives = 71/128 (55.47%), Query Frame = -1 Query: 360 VVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQ 743 V+IF A L +L + +HSG+ Q++R++ F+ RILVATD+ RG+DI V +V+N+D+P D Y+HRVGR R G G ++TF+ D +++ ++ R + E E+ Sbjct: 334 VIIFCNRTKTATLLEYMLRMLDHRVTALHSGLKQQDRISNLARFRAQAARILVATDVAARGLDIPEVGLVVNFDVPRDPDDYIHRVGRTARAGRPGNSVTFIGQ-RDVELVLAIEERVGGKMSEFEEE 460
BLAST of CN185811 vs. ExPASy Swiss-Prot
Match: DBP5_LODEL (ATP-dependent RNA helicase DBP5 OS=Lodderomyces elongisporus GN=DBP5 PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.645e-16 Identity = 45/139 (32.37%), Postives = 76/139 (54.68%), Query Frame = -1 Query: 381 LNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSAD------TYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVD 779 L +L L +IFV+ + A L + E +H G+ +R F+EG ++L+ T+++ RGIDI V++V+NYD+P + + TYLHR+GR GRFG G++++FV++ D L + F ++ Sbjct: 345 LCELYGLLTIGSSIIFVEQKATADSLYLRMKEEGHTVSILHGGLEVADRDRLIDDFREGRSKVLITTNVLARGIDIATVSMVVNYDLPRTKEGRPDPSTYLHRIGRTGRFGRVGVSVSFVANEKDYQTLKYIAEYFGIE 483
BLAST of CN185811 vs. ExPASy Swiss-Prot
Match: DBP2_CRYNE (ATP-dependent RNA helicase DBP2-A OS=Cryptococcus neoformans GN=DBP2 PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.645e-16 Identity = 47/135 (34.81%), Postives = 71/135 (52.59%), Query Frame = -1 Query: 342 QVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTY 746 +V+IFV + A +L K L +P++ IH Q ER FK G I++ATD+ RG+D+ + VINYD P++ + Y+HR+GR GR G KG + T+ + + VQ E PE + + Y Sbjct: 358 KVLIFVATKRVADDLTKFLRMDGWPALAIHGDKQQAERDWVLAEFKSGRSPIMLATDVASRGLDVRDIGYVINYDFPNNCEDYIHRIGRTGRAGRKGTSYTYFTMDNSKAARELVQILRESKADIPPELEEMAMY 492 The following BLAST results are available for this feature:
BLAST of CN185811 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185811 ID=CN185811; Name=CN185811; organism=Citrus sinensis; type=EST; length=791bpback to top |