CN185811
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185811 vs. ExPASy Swiss-Prot
Match: IF4A_YEAST (ATP-dependent RNA helicase eIF4A OS=Saccharomyces cerevisiae GN=TIF1 PE=1 SV=3) HSP 1 Score: 120.553 bits (301), Expect = 1.028e-26 Identity = 60/143 (41.96%), Postives = 91/143 (63.64%), Query Frame = -1 Query: 351 LNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDT 779 L DL D++ Q VIF + + EL L F I+S + Q+ER T K F+ G+ RIL++TDL+ RGID+++V++VINYD+P + + Y+HR+GR GRFG KG+AI FV++ D + +++ + I+ELP I T Sbjct: 251 LTDLYDSISVTQAVIFCNTRRKVEELTTKLRNDKFTVSAIYSDLPQQERDTIMKEFRSGSSRILISTDLLARGIDVQQVSLVINYDLPANKENYIHRIGRGGRFGRKGVAINFVTN-EDVGAMRELEKFYSTQIEELPSDIAT 392
BLAST of CN185811 vs. ExPASy Swiss-Prot
Match: IF4A_YEAS7 (ATP-dependent RNA helicase eIF4A OS=Saccharomyces cerevisiae (strain YJM789) GN=TIF1 PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.028e-26 Identity = 60/143 (41.96%), Postives = 91/143 (63.64%), Query Frame = -1 Query: 351 LNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDT 779 L DL D++ Q VIF + + EL L F I+S + Q+ER T K F+ G+ RIL++TDL+ RGID+++V++VINYD+P + + Y+HR+GR GRFG KG+AI FV++ D + +++ + I+ELP I T Sbjct: 251 LTDLYDSISVTQAVIFCNTRRKVEELTTKLRNDKFTVSAIYSDLPQQERDTIMKEFRSGSSRILISTDLLARGIDVQQVSLVINYDLPANKENYIHRIGRGGRFGRKGVAINFVTN-EDVGAMRELEKFYSTQIEELPSDIAT 392
BLAST of CN185811 vs. ExPASy Swiss-Prot
Match: IF4A_PICST (ATP-dependent RNA helicase eIF4A OS=Pichia stipitis GN=TIF1 PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.028e-26 Identity = 60/141 (42.55%), Postives = 90/141 (63.83%), Query Frame = -1 Query: 357 LNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQI 779 L DL D++ Q VIF + S+ L L NF IH+ + Q ER T K F+ G+ RIL+ATDL+ RGID+++V++VINYD+P + + Y+HR+GR GRFG KG+AI FV+ D ++ +++ + I+E+P I Sbjct: 253 LCDLYDSISVTQAVIFCNTRSKVEFLTTKLKAENFTVSAIHADLPQAERDTIMKEFRSGSSRILIATDLLARGIDVQQVSLVINYDLPSNKENYIHRIGRGGRFGRKGVAINFVTE-RDVGMMREIEQFYSTQIEEMPADI 392
BLAST of CN185811 vs. ExPASy Swiss-Prot
Match: DHH1_KLULA (ATP-dependent RNA helicase DHH1 OS=Kluyveromyces lactis GN=DHH1 PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.028e-26 Identity = 63/147 (42.86%), Postives = 88/147 (59.86%), Query Frame = -1 Query: 339 LNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTYM 779 LN L L NQ +IF S +R L K + E F H+ M Q ER + F++G R LV +DL+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GRFG GLAI + + +D L +++ +I +P QID S Y+ Sbjct: 264 LNTLFSKLQINQAIIFCNSTNRVELLAKKITELGFSCYYSHARMKQSERNKVFHEFRQGKVRTLVCSDLLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGHLGLAINLI-NWNDRFNLYKIEQELNTEIAPIPSQIDKSLYV 409
BLAST of CN185811 vs. ExPASy Swiss-Prot
Match: RH6_ORYSJ (DEAD-box ATP-dependent RNA helicase 6 OS=Oryza sativa subsp. japonica GN=Os04g0533000 PE=2 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.343e-26 Identity = 65/146 (44.52%), Postives = 87/146 (59.59%), Query Frame = -1 Query: 342 LNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTY 779 LN L L NQ +IF SV+R L K + E + IH+ M Q+ R + F+ G R LV TDL RGIDI+ VN+VIN+D P SA+TYLHRVGR+GRFG GLA+ + + D L +++ +IK +P QID + Y Sbjct: 352 LNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKSAETYLHRVGRSGRFGHLGLAVNLI-TYEDRFNLYRIEQELGTEIKPIPPQIDRAIY 496
BLAST of CN185811 vs. ExPASy Swiss-Prot
Match: IF4A_TRYBB (Probable eukaryotic initiation factor 4A OS=Trypanosoma brucei brucei GN=Tb09.160.3270 PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.754e-26 Identity = 61/147 (41.50%), Postives = 91/147 (61.90%), Query Frame = -1 Query: 339 LNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTYM 779 L DL + + Q VIF + + L L N C+HS MS++ER F+ G+ R+LV TDLV RGID+ VNIVIN+D+P + + YLHR+GR GR+G KG+AI FV+ D ++L ++++ + I+ELP +D + Y+ Sbjct: 259 LMDLYETVSIAQSVIFANTRRKVDWLASQLNSSNHTVSCMHSEMSKQEREKVMGTFRNGSSRVLVTTDLVARGIDVHHVNIVINFDLPTNKENYLHRIGRGGRYGRKGVAINFVTQ-KDVEVLREIESHYHTQIEELP--VDFAAYL 402
BLAST of CN185811 vs. ExPASy Swiss-Prot
Match: IF4A_ASHGO (ATP-dependent RNA helicase eIF4A OS=Ashbya gossypii GN=TIF1 PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.754e-26 Identity = 58/141 (41.13%), Postives = 92/141 (65.25%), Query Frame = -1 Query: 357 LNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQI 779 L+DL D++ Q VIF + + EL K L + +F I+S + Q +R T K F+ G+ RIL++TDL+ RGID+++V++VINYD+P++ + Y+HR+GR GRFG KG+AI V+ D + +++ + I+ELP I Sbjct: 252 LSDLYDSISVTQAVIFCNTRRKVEELTKRLTDDSFTVSAIYSDLPQAQRDTIMKEFRTGSSRILISTDLLARGIDVQQVSLVINYDLPNNKENYIHRIGRGGRFGRKGVAINLVTDRDVGD-MRELERFYSTQIEELPANI 391
BLAST of CN185811 vs. ExPASy Swiss-Prot
Match: IF4A_CRYNE (ATP-dependent RNA helicase eIF4A OS=Cryptococcus neoformans GN=TIF1 PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.291e-26 Identity = 57/142 (40.14%), Postives = 89/142 (62.68%), Query Frame = -1 Query: 366 KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELP 791 K L DL + + Q VIF + + L + L + F +H M QEER K F+ G+ R+L+ TDL+ RGID+++V++VINYD+P S + Y+HR+GR GRFG KG+AI FVS+ D ++L +++ + ++E+P Sbjct: 254 KLETLCDLYETVTITQAVIFCSTRRKVDWLTQQLHDRQFTVSAMHGDMKQEEREVIMKEFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSSKENYIHRIGRGGRFGRKGVAINFVSN-EDKNMLEEIETYYNTQVEEMP 394
BLAST of CN185811 vs. ExPASy Swiss-Prot
Match: IF4A_CANAL (ATP-dependent RNA helicase eIF4A OS=Candida albicans GN=TIF1 PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.291e-26 Identity = 59/141 (41.84%), Postives = 91/141 (64.54%), Query Frame = -1 Query: 357 LNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQI 779 L DL D++ Q VIF + S+ L L E +F IH+ + Q ER T K F+ G+ RIL++TDL+ RGID+++V++VINYD+P + + Y+HR+GR GRFG KG+AI FV+ D ++ +++ + I+E+P I Sbjct: 253 LCDLYDSISVTQAVIFCNTRSKVEFLTNKLREQHFTVSAIHADLPQAERDTIMKEFRSGSSRILISTDLLARGIDVQQVSLVINYDLPANKENYIHRIGRGGRFGRKGVAINFVTD-RDVGMMREIEKFYSTQIEEMPADI 392
BLAST of CN185811 vs. ExPASy Swiss-Prot
Match: DHH1_PICGU (ATP-dependent RNA helicase DHH1 OS=Pichia guilliermondii GN=DHH1 PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.291e-26 Identity = 61/147 (41.50%), Postives = 87/147 (59.18%), Query Frame = -1 Query: 339 LNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTYM 779 LN L L NQ +IF S +R L K + E + H+ M Q+ R + F++G+ R LV +DL+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GRFG GLAI F+ + N ++ +IK +P ID S Y+ Sbjct: 257 LNTLFSKLKINQAIIFCNSTNRVELLAKKITELGYSCYYSHAKMPQQARNKVFHEFRQGSVRTLVCSDLLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGHLGLAINFIHWDDRKSLFN-IETELGTEIKPIPSDIDRSLYV 402 The following BLAST results are available for this feature:
BLAST of CN185811 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185811 ID=CN185811; Name=CN185811; organism=Citrus sinensis; type=EST; length=791bpback to top |