CN185811
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185811 vs. ExPASy Swiss-Prot
Match: DDX20_HUMAN (Probable ATP-dependent RNA helicase DDX20 OS=Homo sapiens GN=DDX20 PE=1 SV=2) HSP 1 Score: 117.472 bits (293), Expect = 8.704e-26 Identity = 55/145 (37.93%), Postives = 88/145 (60.69%), Query Frame = -1 Query: 357 KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQI 791 K + L +L + FNQ ++F SRA L +L FP+ CI M+Q +RL K + R+L++TDL RGID E+VN+V+N D+P +TY+HR+GRAGRFGT GL +T+ + +++ ++ + +++ LP+ I Sbjct: 296 KTQHLQELFSRIPFNQALVFSNLHSRAQHLADILSSKGFPAECISGNMNQNQRLDAMAKLKHFHCRVLISTDLTSRGIDAEKVNLVVNLDVPLDWETYMHRIGRAGRFGTLGLTVTYCCRGEEENMMMRIAQKCNINLLPLPDPI 440
BLAST of CN185811 vs. ExPASy Swiss-Prot
Match: CGH1_CAEEL (ATP-dependent RNA helicase cgh-1 OS=Caenorhabditis elegans GN=cgh-1 PE=1 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.137e-25 Identity = 60/147 (40.82%), Postives = 87/147 (59.18%), Query Frame = -1 Query: 339 LNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTYM 779 LN L L NQ +IF S R L K + E + IHS M+Q R + F++GN R LV +DL+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GRFG G+AI + + D L +++ I+ +P+ +D Y+ Sbjct: 271 LNTLFRKLQINQSIIFCNSTQRVELLAKKITEIGYSCYYIHSKMAQNHRNRVFHDFRQGNCRNLVCSDLLTRGIDIQAVNVVINFDFPRNAETYLHRIGRSGRFGHLGVAINLI-TYEDRHTLRRIEQELRTRIEPIPKTVDPKLYV 416
BLAST of CN185811 vs. ExPASy Swiss-Prot
Match: FAL1_YEAST (ATP-dependent RNA helicase FAL1 OS=Saccharomyces cerevisiae GN=FAL1 PE=1 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.485e-25 Identity = 54/138 (39.13%), Postives = 90/138 (65.22%), Query Frame = -1 Query: 366 LNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELP 779 L D+ D+L Q VIF + + L++ L++ NF + +H M QEER F+ G+ R+L++TD+ RGID+++V++VINYD+P+ + Y+HR+GR+GRFG KG+AI F++ A D L +++ + + I +P Sbjct: 256 LCDIYDSLTITQCVIFCNTKKKVDWLSQRLIQSNFAVVSMHGDMKQEERDKVMNDFRTGHSRVLISTDVWARGIDVQQVSLVINYDLPEIIENYIHRIGRSGRFGRKGVAINFITKA-DLAKLREIEKFYSIKINPMP 392
BLAST of CN185811 vs. ExPASy Swiss-Prot
Match: FAL1_YEAS7 (ATP-dependent RNA helicase FAL1 OS=Saccharomyces cerevisiae (strain YJM789) GN=FAL1 PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.485e-25 Identity = 54/138 (39.13%), Postives = 90/138 (65.22%), Query Frame = -1 Query: 366 LNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELP 779 L D+ D+L Q VIF + + L++ L++ NF + +H M QEER F+ G+ R+L++TD+ RGID+++V++VINYD+P+ + Y+HR+GR+GRFG KG+AI F++ A D L +++ + + I +P Sbjct: 256 LCDIYDSLTITQCVIFCNTKKKVDWLSQRLIQSNFAVVSMHGDMKQEERDKVMNDFRTGHSRVLISTDVWARGIDVQQVSLVINYDLPEIIENYIHRIGRSGRFGRKGVAINFITKA-DLAKLREIEKFYSIKINPMP 392
BLAST of CN185811 vs. ExPASy Swiss-Prot
Match: FAL1_ASHGO (ATP-dependent RNA helicase FAL1 OS=Ashbya gossypii GN=FAL1 PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.485e-25 Identity = 55/143 (38.46%), Postives = 90/143 (62.94%), Query Frame = -1 Query: 351 LNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDT 779 L DL D+L Q VIF + + L+ L++ NF IH M Q++R F+ G+ R+L++TD+ RGID+++V++VINYD+P+ + Y+HR+GR+GRFG KG+AI F+ + + L ++ + + IK +P ID+ Sbjct: 255 LCDLYDSLTITQCVIFCNTKKKVDWLSHKLIQNNFAVASIHGDMKQDDRDKVMSDFRSGSSRVLISTDVWARGIDVQQVSLVINYDLPELLENYIHRIGRSGRFGRKGVAINFI-TREEVTKLKSIEKHYSIKIKPMPADIDS 396
BLAST of CN185811 vs. ExPASy Swiss-Prot
Match: DHH1_VANPO (ATP-dependent RNA helicase DHH1 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=DHH1 PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.939e-25 Identity = 60/147 (40.82%), Postives = 89/147 (60.54%), Query Frame = -1 Query: 339 LNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTYM 779 LN L L NQ +IF S +R L K + + + H+ M Q+ER + F++G R LV +DL+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GRFG GLAI + + +D L +++ +I+ +P ID S Y+ Sbjct: 262 LNTLFSKLQINQAIIFCNSTNRVELLAKKITDLGYSCYYSHARMKQQERNRVFHEFRQGKVRTLVCSDLLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGHLGLAINLI-NWNDRFNLYKIEQELGTEIQAIPATIDKSLYV 407
BLAST of CN185811 vs. ExPASy Swiss-Prot
Match: IF4A_DROME (Eukaryotic initiation factor 4A OS=Drosophila melanogaster GN=eIF-4a PE=2 SV=3) HSP 1 Score: 115.931 bits (289), Expect = 2.533e-25 Identity = 56/141 (39.72%), Postives = 86/141 (60.99%), Query Frame = -1 Query: 357 LNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQI 779 L DL D L Q VIF + + +L + + NF +H M Q +R K F+ G+ R+L+ TDL+ RGID+++V++VINYD+P + + Y+HR+GR GRFG KG+AI F++ D IL ++ + I+E+P I Sbjct: 260 LCDLYDTLSITQSVIFCNTRRKVDQLTQEMSIHNFTVSAMHGDMEQRDREVIMKQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHRIGRGGRFGRKGVAINFITD-DDRRILKDIEQFYHTTIEEMPANI 399
BLAST of CN185811 vs. ExPASy Swiss-Prot
Match: IF4A_DEBHA (ATP-dependent RNA helicase eIF4A OS=Debaryomyces hansenii GN=TIF1 PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.308e-25 Identity = 57/141 (40.43%), Postives = 89/141 (63.12%), Query Frame = -1 Query: 357 LNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQI 779 L DL D++ Q VIF + S+ L L NF IH+ + Q +R T F+ G+ RIL++TDL+ RGID+++V++VINYD+P + + Y+HR+GR GRFG KG+AI FV+ D ++ +++ + I+E+P I Sbjct: 253 LCDLYDSISVTQAVIFCNTRSKVEFLTTKLKGENFTVSAIHADLPQADRDTIMNEFRSGSSRILISTDLLARGIDVQQVSLVINYDLPANKENYIHRIGRGGRFGRKGVAINFVTD-QDVGMMREIEKFYSTQIEEMPADI 392
BLAST of CN185811 vs. ExPASy Swiss-Prot
Match: DHH1_YEAST (ATP-dependent RNA helicase DHH1 OS=Saccharomyces cerevisiae GN=DHH1 PE=1 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.308e-25 Identity = 60/147 (40.82%), Postives = 88/147 (59.86%), Query Frame = -1 Query: 339 LNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTYM 779 LN L L NQ +IF S +R L K + + + H+ M Q+ER + F++G R LV +DL+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GRFG GLAI + + +D L +++ +I +P ID S Y+ Sbjct: 274 LNTLFSKLQINQAIIFCNSTNRVELLAKKITDLGYSCYYSHARMKQQERNKVFHEFRQGKVRTLVCSDLLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGHLGLAINLI-NWNDRFNLYKIEQELGTEIAAIPATIDKSLYV 419
BLAST of CN185811 vs. ExPASy Swiss-Prot
Match: DHH1_YEAS7 (ATP-dependent RNA helicase DHH1 OS=Saccharomyces cerevisiae (strain YJM789) GN=DHH1 PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.308e-25 Identity = 60/147 (40.82%), Postives = 88/147 (59.86%), Query Frame = -1 Query: 339 LNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTYM 779 LN L L NQ +IF S +R L K + + + H+ M Q+ER + F++G R LV +DL+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GRFG GLAI + + +D L +++ +I +P ID S Y+ Sbjct: 274 LNTLFSKLQINQAIIFCNSTNRVELLAKKITDLGYSCYYSHARMKQQERNKVFHEFRQGKVRTLVCSDLLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGHLGLAINLI-NWNDRFNLYKIEQELGTEIAAIPATIDKSLYV 419 The following BLAST results are available for this feature:
BLAST of CN185811 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185811 ID=CN185811; Name=CN185811; organism=Citrus sinensis; type=EST; length=791bpback to top |