CN185805
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185805 vs. ExPASy Swiss-Prot
Match: PSB2_PICGU (Probable proteasome subunit beta type-2 OS=Pichia guilliermondii GN=PRO2 PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.446e-37 Identity = 82/191 (42.93%), Postives = 120/191 (62.83%), Query Frame = 3 Query: 45 MECVFGLVGDGFTILVADTSAVHSILVHKSNEDKIMVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFR-NGIPLTTAAAANFTRGELATALR-KSPYMVNILLAGYDKETG-PSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAR 608 M+ V G+ + T++ +A I V K +DK L+SH L+A SGE GD VQF E+IQ N LY R N L+ A A+F R +LAT++R + PY VN+LLAGYD TG PSL +IDY+ T ++ AA GY ++ S++D+H+ GM+ E+ +DL+ KCI E+ +R+ + IK+VDK+G + Sbjct: 1 MDIVLGIRVEDCTLVATSKAATRGISVLKDTDDKTRQLNSHNLMAYSGEAGDTVQFAEYIQANTQLYTMRENDTELSPKATASFVRNQLATSIRSRKPYQVNVLLAGYDTNTGKPSLNWIDYLGTQVELPYAAHGYAGFYCTSLLDKHYKKGMNFEDGLDLLKKCIKELETRMPIDFKGCYIKVVDKEGIK 191
BLAST of CN185805 vs. ExPASy Swiss-Prot
Match: PSB2_CRYNE (Probable proteasome subunit beta type-2 OS=Cryptococcus neoformans GN=CPR1 PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 5.142e-35 Identity = 84/188 (44.68%), Postives = 114/188 (60.64%), Query Frame = 3 Query: 45 MECVFGLVGDGFTILVADTSAVHSILVHKSNEDKIMVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNILLAGYDKETG-PSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDG 602 MEC FG+ G + IL +D A SI+ KS+E+K+ L H +A SGEPGD F E+I++N+ LY RN PL AA+ + R LA A+R + PY VN+LL G+D T P LY+IDY+ T V AA G G Y SLS MD+ ++ M +E VDL+ KCI E RL + +F ++DK+G Sbjct: 1 MECSFGITGKDYVILASDMGAGRSIVRMKSDENKLKTLGPHLAMAFSGEPGDTNNFAEYIERNMRLYNIRNHFPLLPPAASAWVRRTLAEAIRSRHPYAVNLLLGGFDTTTSKPHLYWIDYLGTKAIVPYAAHGMGVYVSLSTMDKWWYEDMDKKEGVDLLRKCIDETEKRLTI-KFDFNCILIDKNG 187
BLAST of CN185805 vs. ExPASy Swiss-Prot
Match: PSB2_DROME (Probable proteasome subunit beta type-2 OS=Drosophila melanogaster GN=Prosbeta4R2 PE=1 SV=3) HSP 1 Score: 146.747 bits (369), Expect = 1.145e-34 Identity = 75/190 (39.47%), Postives = 116/190 (61.05%), Query Frame = 3 Query: 45 MECVFGLVGDGFTILVADTSAVHSILVHKSNEDKIMVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSP-YMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 611 ME + G+ G F +L +DT S++ K ++ KI L ++A G+ GD +QFT+FI KN+ LY+ +G L+ +AA+FTR LA +R + Y V +LLAGYD GP L+YID ++ A G+GS F S++ R+++S +S E+A L+ KC+LEI+ RL++ NF + +VD G R+ Sbjct: 3 METILGIKGPDFVMLASDTMQAKSLVFMKDDQSKIHRLSDFNMMATVGDGGDTIQFTDFISKNLHLYKISHGYHLSAKSAAHFTRKTLADYIRTNTRYQVAMLLAGYDAVEGPDLHYIDSYGAAQSINHAGHGWGSMFCGSILQRYWNSKLSQEDAYSLMKKCVLEIQRRLIINQRNFEVYVVDSKGMRK 192
BLAST of CN185805 vs. ExPASy Swiss-Prot
Match: PSB2_YEAST (Proteasome component C11 OS=Saccharomyces cerevisiae GN=PRE1 PE=1 SV=2) HSP 1 Score: 145.206 bits (365), Expect = 3.333e-34 Identity = 72/191 (37.70%), Postives = 112/191 (58.64%), Query Frame = 3 Query: 45 MECVFGLVGDGFTILVADTSAVHSILVHKSNEDKIMVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNILLAGYDKETG-PSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 611 M+ + G+ IL + + I V K ++DK L H L++ +GE GD VQF E+IQ N+ LY R L+ A ++F R ELA ++R + PY VN+L+ GYDK+ P LY IDY+ T ++ A GY +++ S++D H+ M+ EE +DL+ C+ E+ R+ + ++KIVDKDG R+ Sbjct: 1 MDIILGIRVQDSVILASSKAVTRGISVLKDSDDKTRQLSPHTLMSFAGEAGDTVQFAEYIQANIQLYSIREDYELSPQAVSSFVRQELAKSIRSRRPYQVNVLIGGYDKKKNKPELYQIDYLGTKVELPYGAHGYSGFYTFSLLDHHYRPDMTTEEGLDLLKLCVQELEKRMPMDFKGVIVKIVDKDGIRQ 191
BLAST of CN185805 vs. ExPASy Swiss-Prot
Match: PSB2_TRYBB (Proteasome subunit beta type-2 OS=Trypanosoma brucei brucei GN=PSB4 PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.569e-28 Identity = 74/188 (39.36%), Postives = 108/188 (57.45%), Query Frame = 3 Query: 72 DGFTILVADTSAVHSILVHKSNEDKIMVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFR-NGIPLTTAAAANFTRGELATALRKSP--YMVNILLAGYDKE--------TGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDG 602 D + A +A + I + EDKI LDSHK++A +GE G R F E+++ N++L + R +G ++T A A+F R LA ALR Y VN LLAG+D TG LYY+DY+ TL +V GYG+ F +M+DR + ++ +E V+L+ KC E+ R+VV+ F+ K V KDG Sbjct: 12 DFVLVAAAGLNAFYYIKI-TDTEDKITELDSHKVVACAGENGPRTHFVEYVKCNMALKKMREHGRMISTHATASFMRNTLAGALRSRDGLYPVNCLLAGFDVPASAEDDVATGAHLYYLDYLGTLQEVPYGCHGYGAPFVTAMLDRMWRPNLTAQEGVELMQKCCDEVNKRVVVSNNTFICKAVPKDG 198
BLAST of CN185805 vs. ExPASy Swiss-Prot
Match: PSB2_ENCCU (Probable proteasome subunit beta type-2 OS=Encephalitozoon cuniculi GN=PRE1 PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.969e-20 Identity = 51/186 (27.42%), Postives = 99/186 (53.23%), Query Frame = 3 Query: 45 MECVFGLVGDGFTILVADTSAVHSILVHKSNEDKIMVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDG 602 M+ G+ G F I+ ADT SILV K N +K V+ ++A +G GD + ++ ++ + +NGI L+ + A+ + ++ +LR+ ++ ++AG E L+ +D + V A GY +YF ++DR + ++++ A+ ++ KC+ ++ RL++ F++KIV DG Sbjct: 1 MDSSIGIKGRNFAIVAADTKISSSILVVKENHEKFQVIKDRIVMAMTGNQGDAFRTMLYVSESALYEEIQNGIELSPSVLAHMIQNKVHESLRRRQLDISSIVAGRGPEK-YDLWSVDKYGAISSVPFCASGYAAYFVYGILDREYSEDITIDAALSIMQKCVNLLKERLMINLEGFMVKIVTDDG 185
BLAST of CN185805 vs. ExPASy Swiss-Prot
Match: PSB2_CAEEL (Proteasome subunit beta type-2 OS=Caenorhabditis elegans GN=pbs-4 PE=2 SV=2) HSP 1 Score: 95.1301 bits (235), Expect = 3.955e-19 Identity = 61/193 (31.61%), Postives = 99/193 (51.30%), Query Frame = 3 Query: 45 MECVFGLVGDGFTILVADTSA-VHSILVHKSNEDKIMVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSP-YMVNILLAGYD-KETGPSLYYIDYIAT-LHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 611 M + G+ + + IL AD + + ++ S DK L + GE GD QF ++ ++N+ LY RNG ++ + A +F R +A LR Y V++L+ GYD KE L +DY+A L + G+ F ++MDR + M+ E + L++KCI E + R V P + + I+DK G R+ Sbjct: 1 MHFLVGISTENYVILAADKATFAYGAILADSENDKEYRLGKKLTMMCIGEEGDVAQFGDWTKRNLQLYSVRNGYEVSPSCAHHFVRRSIAEGLRSQDHYTVDVLIGGYDDKEDKAFLGSVDYLANGLGQQPYLFRGFCGRFCYAIMDREYKKDMTEAEGLALMNKCIGEAKRRFVANIPGYKVVIIDKKGYRK 193
BLAST of CN185805 vs. ExPASy Swiss-Prot
Match: PSMB_PYRFU (Proteasome subunit beta OS=Pyrococcus furiosus GN=psmB PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.653e-15 Identity = 54/192 (28.12%), Postives = 90/192 (46.88%), Query Frame = 3 Query: 60 GLVGDGFTILVADTSAVHSILVHKSNEDKIMVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVK 635 GLV +L ADT A +++ N KI +D H IA +G+ GD + ++ +LY+ G ++ A A + + PY+ L+ GYD++ P L+ +D + + + + AA G G F+ S++D + MSV + + L K I R V ++ + KDG +EY E K Sbjct: 15 GLVCKEGVVLAADTRASLGNIIYAKNVTKIHKIDEHLAIAGAGDVGDILNLVRLLKAEANLYKSTVGKEMSVKALATLL-ANILNGSKYFPYLGWFLVGGYDEK--PRLFSVDMVGGITEDNYAAAGSGMEFAYSILDSEYREEMSVNDGIKLAVKAINVAIKRDVFTGDGLLVVTITKDGYKEYRGAELEK 203
BLAST of CN185805 vs. ExPASy Swiss-Prot
Match: PSMB_PYRHO (Proteasome subunit beta OS=Pyrococcus horikoshii GN=psmB PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.115e-13 Identity = 47/184 (25.54%), Postives = 86/184 (46.74%), Query Frame = 3 Query: 60 GLVGDGFTILVADTSAVHSILVHKSNEDKIMVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 611 G+V +L AD A +++ N KI +D H IA +G+ GD + ++ LY ++G ++ A A + + PY+ L+ GYD++ P LY +D + + + A G G F+ S++D + +++EE + L K I R V + ++ + K+G +E Sbjct: 15 GIVCKDGVVLAADRRASLGNIIYARNVTKIHKIDEHLAIAGAGDVGDILNLVRLLRAEAKLYYSQSGKRMSVKALATLL-ANIMNGAKYFPYLAWFLVGGYDEK--PKLYSVDMVGGITEDKYATAGSGMEFAYSILDSEYKDNLTLEEGIKLAVKAINTAIKRDVFSGDGILVVTITKEGYKE 195
BLAST of CN185805 vs. ExPASy Swiss-Prot
Match: PSMB_PYRAB (Proteasome subunit beta OS=Pyrococcus abyssi GN=psmB PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 9.436e-13 Identity = 48/184 (26.09%), Postives = 85/184 (46.20%), Query Frame = 3 Query: 60 GLVGDGFTILVADTSAVHSILVHKSNEDKIMVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 611 G+V +L AD A +V+ N KI +D H IA +G+ GD + ++ LY ++G ++ A A L A R PY+ L+ G+D++ P LY +D + + + A G G F+ S++D + + V E + + + I R V + ++ + ++G RE Sbjct: 15 GIVCSDGVVLAADRRASLGNIVYAKNVTKIHKIDEHLAIAGAGDVGDILNLVRLLRAEAKLYYAQSGKRMSVKALATLLANMLNGA-RMLPYLAWFLVGGFDEK--PRLYSVDMMGGITEDKYVAAGSGMEFAYSVLDSEYREDLKVREGIKIAVEAINSAIKRDVFSGDGIMVVTITEEGYRE 195 The following BLAST results are available for this feature:
BLAST of CN185805 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185805 ID=CN185805; Name=CN185805; organism=Citrus sinensis; type=EST; length=723bpback to top |