CN185804
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185804 vs. ExPASy Swiss-Prot
Match: PSB2_NEUCR (Probable proteasome subunit beta type-2 OS=Neurospora crassa GN=15E6.60 PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.245e-34 Identity = 75/160 (46.88%), Postives = 105/160 (65.62%), Query Frame = -3 Query: 261 KSNEDKIMVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNILLAGYDKET-GPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDG 734 K+++DK L+ H L+A SGE GD VQF E+ Q N LY RNG L+ +A ANF RGELAT+LR + PY VN+LL G D T PSLY++DY+A+L KV AA GY Y+ LS++D+H H +++ + + L++ C E++ RL + +K V KDG Sbjct: 29 KASDDKTRSLNKHTLMAFSGEAGDTVQFAEYTQANAQLYSMRNGTDLSPSALANFVRGELATSLRSRKPYNVNLLLGGVDPITHKPSLYWLDYLASLAKVPYAAHGYAQYYCLSILDKHHHPDITLHQGIKLLNLCTDELKRRLPIDFKGMTVKAVTKDG 188
BLAST of CN185804 vs. ExPASy Swiss-Prot
Match: PSB2_YEAST (Proteasome component C11 OS=Saccharomyces cerevisiae GN=PRE1 PE=1 SV=2) HSP 1 Score: 138.658 bits (348), Expect = 3.392e-32 Identity = 68/167 (40.72%), Postives = 103/167 (61.68%), Query Frame = -3 Query: 252 ILVHKSNEDKIMVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNILLAGYDKETG-PSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 746 I V K ++DK L H L++ +GE GD VQF E+IQ N+ LY R L+ A ++F R ELA ++R + PY VN+L+ GYDK+ P LY IDY+ T ++ A GY +++ S++D H+ M+ EE +DL+ C+ E+ R+ + ++KIVDKDG R+ Sbjct: 25 ISVLKDSDDKTRQLSPHTLMSFAGEAGDTVQFAEYIQANIQLYSIREDYELSPQAVSSFVRQELAKSIRSRRPYQVNVLIGGYDKKKNKPELYQIDYLGTKVELPYGAHGYSGFYTFSLLDHHYRPDMTTEEGLDLLKLCVQELEKRMPMDFKGVIVKIVDKDGIRQ 191
BLAST of CN185804 vs. ExPASy Swiss-Prot
Match: PSB2_DROME (Probable proteasome subunit beta type-2 OS=Drosophila melanogaster GN=Prosbeta4R2 PE=1 SV=3) HSP 1 Score: 130.568 bits (327), Expect = 9.236e-30 Identity = 67/167 (40.12%), Postives = 104/167 (62.28%), Query Frame = -3 Query: 252 SILVHKSNEDKIMVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSP-YMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 749 S++ K ++ KI L ++A G+ GD +QFT+FI KN+ LY+ +G L+ +AA+FTR LA +R + Y V +LLAGYD GP L+YID ++ A G+GS F S++ R+++S +S E+A L+ KC+LEI+ RL++ NF + +VD G R+ Sbjct: 26 SLVFMKDDQSKIHRLSDFNMMATVGDGGDTIQFTDFISKNLHLYKISHGYHLSAKSAAHFTRKTLADYIRTNTRYQVAMLLAGYDAVEGPDLHYIDSYGAAQSINHAGHGWGSMFCGSILQRYWNSKLSQEDAYSLMKKCVLEIQRRLIINQRNFEVYVVDSKGMRK 192
BLAST of CN185804 vs. ExPASy Swiss-Prot
Match: PSB2_CRYNE (Probable proteasome subunit beta type-2 OS=Cryptococcus neoformans GN=CPR1 PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 7.819e-29 Identity = 74/165 (44.85%), Postives = 101/165 (61.21%), Query Frame = -3 Query: 261 SILVHKSNEDKIMVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALR-KSPYMVNILLAGYDKETG-PSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDG 749 SI+ KS+E+K+ L H +A SGEPGD F E+I++N+ LY RN PL AA+ + R LA A+R + PY VN+LL G+D T P LY+IDY+ T V AA G G Y SLS MD+ ++ M +E VDL+ KCI E RL + +F ++DK+G Sbjct: 24 SIVRMKSDENKLKTLGPHLAMAFSGEPGDTNNFAEYIERNMRLYNIRNHFPLLPPAASAWVRRTLAEAIRSRHPYAVNLLLGGFDTTTSKPHLYWIDYLGTKAIVPYAAHGMGVYVSLSTMDKWWYEDMDKKEGVDLLRKCIDETEKRLTI-KFDFNCILIDKNG 187
BLAST of CN185804 vs. ExPASy Swiss-Prot
Match: PSB2_TRYBB (Proteasome subunit beta type-2 OS=Trypanosoma brucei brucei GN=PSB4 PE=2 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 5.068e-28 Identity = 70/166 (42.17%), Postives = 100/166 (60.24%), Query Frame = -3 Query: 261 EDKIMVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFR-NGIPLTTAAAANFTRGELATALRKSP--YMVNILLAGYDKE--------TGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDG 725 EDKI LDSHK++A +GE G R F E+++ N++L + R +G ++T A A+F R LA ALR Y VN LLAG+D TG LYY+DY+ TL +V GYG+ F +M+DR + ++ +E V+L+ KC E+ R+VV+ F+ K V KDG Sbjct: 33 EDKITELDSHKVVACAGENGPRTHFVEYVKCNMALKKMREHGRMISTHATASFMRNTLAGALRSRDGLYPVNCLLAGFDVPASAEDDVATGAHLYYLDYLGTLQEVPYGCHGYGAPFVTAMLDRMWRPNLTAQEGVELMQKCCDEVNKRVVVSNNTFICKAVPKDG 198
BLAST of CN185804 vs. ExPASy Swiss-Prot
Match: PSB2_CAEEL (Proteasome subunit beta type-2 OS=Caenorhabditis elegans GN=pbs-4 PE=2 SV=2) HSP 1 Score: 88.1965 bits (217), Expect = 5.257e-17 Identity = 55/170 (32.35%), Postives = 88/170 (51.76%), Query Frame = -3 Query: 252 HSILVHKSNEDKIMVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSP-YMVNILLAGYD-KETGPSLYYIDYIAT-LHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGARE 752 + ++ S DK L + GE GD QF ++ ++N+ LY RNG ++ + A +F R +A LR Y V++L+ GYD KE L +DY+A L + G+ F ++MDR + M+ E + L++KCI E + R V P + + I+DK G R+ Sbjct: 24 YGAILADSENDKEYRLGKKLTMMCIGEEGDVAQFGDWTKRNLQLYSVRNGYEVSPSCAHHFVRRSIAEGLRSQDHYTVDVLIGGYDDKEDKAFLGSVDYLANGLGQQPYLFRGFCGRFCYAIMDREYKKDMTEAEGLALMNKCIGEAKRRFVANIPGYKVVIIDKKGYRK 193
BLAST of CN185804 vs. ExPASy Swiss-Prot
Match: PSB2_ENCCU (Probable proteasome subunit beta type-2 OS=Encephalitozoon cuniculi GN=PRE1 PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.295e-15 Identity = 43/163 (26.38%), Postives = 88/163 (53.99%), Query Frame = -3 Query: 261 SILVHKSNEDKIMVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDG 749 SILV K N +K V+ ++A +G GD + ++ ++ + +NGI L+ + A+ + ++ +LR+ ++ ++AG E L+ +D + V A GY +YF ++DR + ++++ A+ ++ KC+ ++ RL++ F++KIV DG Sbjct: 24 SILVVKENHEKFQVIKDRIVMAMTGNQGDAFRTMLYVSESALYEEIQNGIELSPSVLAHMIQNKVHESLRRRQLDISSIVAGRGPEKY-DLWSVDKYGAISSVPFCASGYAAYFVYGILDREYSEDITIDAALSIMQKCVNLLKERLMINLEGFMVKIVTDDG 185
BLAST of CN185804 vs. ExPASy Swiss-Prot
Match: PSMB_PYRFU (Proteasome subunit beta OS=Pyrococcus furiosus GN=psmB PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.026e-12 Identity = 46/172 (26.74%), Postives = 81/172 (47.09%), Query Frame = -3 Query: 228 LVHKSNEDKIMVLDSHKLIAASGEPGDRVQFTEFIQKNVSLYQFRNGIPLTTAAAANFTRGELATALRKSPYMVNILLAGYDKETGPSLYYIDYIATLHKVDKAAFGYGSYFSLSMMDRHFHSGMSVEEAVDLVDKCILEIRSRLVVAPPNFVIKIVDKDGAREYAWRESVK 743 +++ N KI +D H IA +G+ GD + ++ +LY+ G ++ A A + + PY+ L+ GYD++ P L+ +D + + + + AA G G F+ S++D + MSV + + L K I R V ++ + KDG +EY E K Sbjct: 35 IIYAKNVTKIHKIDEHLAIAGAGDVGDILNLVRLLKAEANLYKSTVGKEMSVKALATLL-ANILNGSKYFPYLGWFLVGGYDEK--PRLFSVDMVGGITEDNYAAAGSGMEFAYSILDSEYREEMSVNDGIKLAVKAINVAIKRDVFTGDGLLVVTITKDGYKEYRGAELEK 203 The following BLAST results are available for this feature:
BLAST of CN185804 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185804 ID=CN185804; Name=CN185804; organism=Citrus sinensis; type=EST; length=757bpback to top |