CN185803

Overview
NameCN185803
Unique NameCN185803
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length630
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185803 vs. ExPASy Swiss-Prot
Match: DNAK_NITMS (Chaperone protein dnaK OS=Nitrosopumilus maritimus (strain SCM1) GN=dnaK PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.823e-11
Identity = 39/113 (34.51%), Postives = 67/113 (59.29%), Query Frame = 1
Query:    4 KITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 342
            KITI   K +LS++EIEK+ ++AEK+  ED++ K+K++ KN  E+Y Y     V  + +  K+      KI DA+ +  + LD     E +E + K++ L+SI N +  ++Y+
Sbjct:  476 KITIET-KTKLSEEEIEKLKEDAEKFSEEDKKKKEKIDLKNEAESYIYTTEKLVNHD-LKDKISQEQGIKITDAVKEVKEVLDK----EPEELKPKLEALQSIVNEVTTELYK 582          
BLAST of CN185803 vs. ExPASy Swiss-Prot
Match: HSP75_KLUMA (Heat shock protein SSB OS=Kluyveromyces marxianus GN=SSB PE=3 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 3.109e-11
Identity = 39/91 (42.86%), Postives = 56/91 (61.54%), Query Frame = 1
Query:    7 ITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADE 279
            ITI+N  GRLS +EIE+MV +AE++KA DE   KK EA+  LE+Y  +++ TV D  + +K+    K K+E A+  A   L     A AD+
Sbjct:  505 ITISNAIGRLSSEEIEQMVNQAEEFKAADEAFAKKHEARQRLESYISSVQQTVTDPVLSAKIKRNAKAKVEAALADAFSTLQIED-ASADD 594          
BLAST of CN185803 vs. ExPASy Swiss-Prot
Match: HSP75_KLULA (Heat shock protein SSB OS=Kluyveromyces lactis GN=SSB PE=3 SV=3)

HSP 1 Score: 68.5514 bits (166), Expect = 3.109e-11
Identity = 37/90 (41.11%), Postives = 54/90 (60.00%), Query Frame = 1
Query:    7 ITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEAD 276
            ITI+N  GRLS +EIE+MV +AE++KA DE   KK EA+  LE+Y  ++  TV D  + +K+    K K+E A+ +A   L     +  D
Sbjct:  505 ITISNAIGRLSSEEIEQMVNQAEEFKAADEAFAKKHEARQRLESYISSVEQTVTDPVLSAKIKRNAKAKVEAALAEAFSTLQIEDASTDD 594          
BLAST of CN185803 vs. ExPASy Swiss-Prot
Match: DNAK_ACIC5 (Chaperone protein dnaK OS=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) GN=dnaK PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.109e-11
Identity = 39/113 (34.51%), Postives = 67/113 (59.29%), Query Frame = 1
Query:    4 KITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 342
            KITIT+  G LSK+E+E+M +EAE + AED+  + ++EA+N L+N  YN+   +K+   G K+   +K ++E A+  A + L+    AE  E     ++L +  + +   MY+
Sbjct:  492 KITITSSSG-LSKEEVERMAKEAEAHSAEDKAKRDEIEARNQLDNLVYNIEKMLKEN--GDKVSGEEKAEVETALADAKKTLEGTPTAE--ELNAAREKLTASSHKLAEAMYK 599          
BLAST of CN185803 vs. ExPASy Swiss-Prot
Match: DNAK_CLONN (Chaperone protein dnaK OS=Clostridium novyi (strain NT) GN=dnaK PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.304e-11
Identity = 42/112 (37.50%), Postives = 62/112 (55.36%), Query Frame = 1
Query:    7 ITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 342
            ITIT     LS DEI+K V+EAEK+ AEDE+ K+ VE KN  ++  Y     +KD  +G K++ ADKK +E+ ++   Q  D   L   +  +    EL      + +K+YQ
Sbjct:  471 ITITASTN-LSDDEIDKAVKEAEKFAAEDEKRKESVEVKNNADSALYQTEKALKD--LGDKVEEADKKNVEEKLEALRQVKDGEDL---EAIKKATTELTEEFYKVSSKLYQ 576          
BLAST of CN185803 vs. ExPASy Swiss-Prot
Match: HSP75_SCHPO (Heat shock protein sks2 OS=Schizosaccharomyces pombe GN=sks2 PE=1 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 6.927e-11
Identity = 31/82 (37.80%), Postives = 52/82 (63.41%), Query Frame = 1
Query:    7 ITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLD 252
            I ITN  G LS  +I++M++ A+K+K +D++  KK+EAK+ LE+Y  N+  T+ +  +  KL   DK KIE  + + +  L+
Sbjct:  504 IEITNSVGHLSSTKIQEMIENADKFKQQDKDFAKKLEAKSQLESYISNIETTISEPNVMMKLKRGDKSKIEAQLAECMSQLE 585          
BLAST of CN185803 vs. ExPASy Swiss-Prot
Match: DNAK_CAMLR (Chaperone protein dnaK OS=Campylobacter lari (strain RM2100 / D67 / ATCC BAA-1060) GN=dnaK PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.927e-11
Identity = 38/113 (33.63%), Postives = 65/113 (57.52%), Query Frame = 1
Query:    4 KITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 342
            +I IT   G LS++EI  MV++AE +K ED + K+ VEA+N+ ++  + +  ++ +  +G K+   DK  I+ A+D   + L  N  A  +E E KMK L  + + +   MY+
Sbjct:  492 EIKITGSSG-LSEEEINNMVKDAELHKEEDRKRKEAVEARNSADSLVHQVEKSLSE--LGEKVSDEDKANIQKALDDLKETL-KNANASKEEIESKMKTLSEVSHKLAENMYK 600          
The following BLAST results are available for this feature:
BLAST of CN185803 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 187
Match NameE-valueIdentityDescription
DNAK_NITMS1.823e-1134.51Chaperone protein dnaK OS=Nitrosopumilus maritimus... [more]
HSP75_KLUMA3.109e-1142.86Heat shock protein SSB OS=Kluyveromyces marxianus ... [more]
HSP75_KLULA3.109e-1141.11Heat shock protein SSB OS=Kluyveromyces lactis GN=... [more]
DNAK_ACIC53.109e-1134.51Chaperone protein dnaK OS=Acidobacterium capsulatu... [more]
DNAK_CLONN5.304e-1137.50Chaperone protein dnaK OS=Clostridium novyi (strai... [more]
HSP75_SCHPO6.927e-1137.80Heat shock protein sks2 OS=Schizosaccharomyces pom... [more]
DNAK_CAMLR6.927e-1133.63Chaperone protein dnaK OS=Campylobacter lari (stra... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001O07_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001O07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185803 ID=CN185803; Name=CN185803; organism=Citrus sinensis; type=EST; length=630bp
ATGAAGATCACAATCACCAACGACAAGGGTAGATTGTCAAAGGATGAAAT
TGAGAAGATGGTTCAAGAGGCCGAGAAGTACAAGGCTGAAGATGAGGAGC
ACAAGAAGAAGGTCGAGGCCAAGAATGCCTTGGAAAACTATGCCTACAAT
ATGAGGAACACTGTCAAGGACGAGAAGATCGGCTCCAAACTTGATCCAGC
TGACAAGAAGAAGATTGAGGATGCCATTGACCAGGCAATTCAATGGCTTG
ATAGCAACCAGCTGGCTGAGGCCGATGAATTTGAAGACAAGATGAAGGAG
CTTGAGAGCATCTGCAATCCCATCATTGCCAAGATGTATCAAGGTGCTGG
TGGTGATATGGGCGGTGACATGGATGATGATACTCCTCCAGCTGGTGGCA
GTGCCGCCGGTCCCAAGATTGAGGAAGTTGACTAAGCTTCCAGTTTATTT
TGCTGTGTTTGTGGGAGGTCGGTTTTTTGACGGTGGGAAAACTGGACGTT
TGGTTTTTATCTTATGTTGCTTTAGCCTTAGGATGAATATTAATTTTTCC
TTTTCTTTTTATTTTTCAAATTTTACTTTTAATTCGGACCAATTTATATA
ATGAATATTTTTCAGTCCCTAAAAAAAAAA
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