CN185803

Overview
NameCN185803
Unique NameCN185803
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length630
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185803 vs. ExPASy Swiss-Prot
Match: HSP70_ONCTS (Heat shock 70 kDa protein OS=Oncorhynchus tschawytscha GN=hsp70 PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.481e-37
Identity = 71/143 (49.65%), Postives = 102/143 (71.33%), Query Frame = 1
Query:    4 KITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQXXXXXXXXXXXXXXXXXXXSAAGPKIEEVD 432
            KITITNDKGRLSK++IE+MVQ+A+KYKAED+  ++K+ AKN+LE+YA+NM+++V+D+ +  K+   DKKK+ D  DQ I WL++NQL + +E+E ++KELE +C PII K+YQ                   S+ GP IEE+D
Sbjct:  502 KITITNDKGRLSKEDIERMVQDADKYKAEDDAQREKIAAKNSLESYAFNMKSSVEDDNMKGKISQEDKKKVVDRCDQTISWLENNQLGDKEEYEHQLKELEKVCQPIITKLYQQGGMPTGCCGDQARTSSGDSSQGPTIEEID 644          
BLAST of CN185803 vs. ExPASy Swiss-Prot
Match: HS71L_MACFA (Heat shock 70 kDa protein 1-like OS=Macaca fascicularis GN=HSPA1L PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.481e-37
Identity = 79/143 (55.24%), Postives = 100/143 (69.93%), Query Frame = 1
Query:    4 KITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQXXXXXXXXXXXXXXXXXXXSAAGPKIEEVD 432
            KITITNDKGRLSK+EIE+MV +AEKYKAEDE  ++K+ AKNALE+YA+NM++ V DE +  K+  +DKKKI D  ++ + WL++NQLAE DEF+ K KELE +CNPII K+YQ                    A GP IEEVD
Sbjct:  502 KITITNDKGRLSKEEIERMVLDAEKYKAEDEVQREKIAAKNALESYAFNMKSVVSDEGLKGKISESDKKKILDKCNELLSWLEANQLAEKDEFDHKRKELEQMCNPIITKLYQ---GGCTGPACGTGYAPGRPATGPTIEEVD 641          
BLAST of CN185803 vs. ExPASy Swiss-Prot
Match: HSP7C_DANRE (Heat shock cognate 71 kDa protein OS=Danio rerio GN=hspa8 PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 1.934e-37
Identity = 80/150 (53.33%), Postives = 100/150 (66.67%), Query Frame = 1
Query:    4 KITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQXXXXXXXXXXXXXXXXXXXSAA-------GPKIEEVD 432
            KITITNDKGRLSK++IE+MVQEAEKYKAED+  + KV AKN LE+YA+NM++TV+DEK+  K+   DK+KI D  ++ I WLD NQ AE +EFE + KELE +CNPII K+YQ                   + A       GP IEEVD
Sbjct:  500 KITITNDKGRLSKEDIERMVQEAEKYKAEDDVQRDKVSAKNGLESYAFNMKSTVEDEKLKGKISDEDKQKILDKCNEVIGWLDKNQTAEREEFEHQQKELEKVCNPIITKLYQSAGGMPGGMPEGMPGGFPGAGAAPGGGSSGPTIEEVD 649          
BLAST of CN185803 vs. ExPASy Swiss-Prot
Match: HS71B_MOUSE (Heat shock 70 kDa protein 1B OS=Mus musculus GN=Hspa1b PE=1 SV=3)

HSP 1 Score: 155.606 bits (392), Expect = 1.934e-37
Identity = 78/143 (54.55%), Postives = 99/143 (69.23%), Query Frame = 1
Query:    4 KITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQXXXXXXXXXXXXXXXXXXXSAAGPKIEEVD 432
            KITITNDKGRLSK+EIE+MVQEAE+YKAEDE  + +V AKNALE+YA+NM++ V+DE +  KL  ADKKK+ D   + I WLDSN LA+ +EF  K +ELE +C+PII+ +YQ                   S +GP IEEVD
Sbjct:  500 KITITNDKGRLSKEEIERMVQEAERYKAEDEVQRDRVAAKNALESYAFNMKSAVEDEGLKGKLSEADKKKVLDKCQEVISWLDSNTLADKEEFVHKREELERVCSPIISGLYQGAGAPGAGGFGAQAPPKGASGSGPTIEEVD 642          
BLAST of CN185803 vs. ExPASy Swiss-Prot
Match: HS71L_BOVIN (Heat shock 70 kDa protein 1-like OS=Bos taurus GN=HSPA1L PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 3.299e-37
Identity = 78/143 (54.55%), Postives = 100/143 (69.93%), Query Frame = 1
Query:    4 KITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQXXXXXXXXXXXXXXXXXXXSAAGPKIEEVD 432
            KITITNDKGRLSK+EIE+MV +AEKYKAEDE  ++K+ AKNALE+YA+NM++ V DE +  K+  +DKKKI    ++ + WL++NQLAE DEF+ K KELE +CNPII K+YQ                   +A GP IEEVD
Sbjct:  502 KITITNDKGRLSKEEIERMVLDAEKYKAEDEVQREKIAAKNALESYAFNMKSAVSDEGLQGKISESDKKKILSKCNEVLLWLEANQLAEKDEFDHKRKELEQVCNPIITKLYQ---GGCTGPSCGTGYTPGRAATGPTIEEVD 641          
BLAST of CN185803 vs. ExPASy Swiss-Prot
Match: HSP71_RAT (Heat shock 70 kDa protein 1A/1B OS=Rattus norvegicus GN=Hspa1a PE=2 SV=2)

HSP 1 Score: 154.451 bits (389), Expect = 4.309e-37
Identity = 79/143 (55.24%), Postives = 100/143 (69.93%), Query Frame = 1
Query:    4 KITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQXXXXXXXXXXXXXXXXXXXSAAGPKIEEVD 432
            KITITNDKGRLSK+EIE+MVQEAE+YKAEDE  +++V AKNALE+YA+NM++ V+DE +  K+  ADKKK+ D   + I WLDSN LAE +EF  K +ELE +CNPII+ +YQ                   S +GP IEEVD
Sbjct:  500 KITITNDKGRLSKEEIERMVQEAERYKAEDEVQRERVAAKNALESYAFNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDSNTLAEKEEFVHKREELERVCNPIISGLYQ-GAGAPGAGGFGAQAPKGGSGSGPTIEEVD 641          
BLAST of CN185803 vs. ExPASy Swiss-Prot
Match: HSP70_HYDMA (Heat shock 70 kDa protein OS=Hydra magnipapillata GN=HSP70.1 PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 4.309e-37
Identity = 77/148 (52.03%), Postives = 99/148 (66.89%), Query Frame = 1
Query:    4 KITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ-----XXXXXXXXXXXXXXXXXXXSAAGPKIEEVD 432
            KITITNDKGRLSK++IE+MVQEAEKYKA+DE  + KV+AKN+LE+Y YNM+ TV+DEK+  K+   DKK I    ++ ++W+D NQ AE D++E K KELE +CNPII K+YQ                        S+ GP IEEVD
Sbjct:  507 KITITNDKGRLSKEDIERMVQEAEKYKADDELQRDKVQAKNSLESYCYNMKQTVEDEKVKGKISEEDKKTIIKKCNETVEWVDKNQTAEKDQYEHKQKELEKVCNPIITKLYQAGGGMPGGMPGGMPGGMPGSGSKASSGGPTIEEVD 654          
BLAST of CN185803 vs. ExPASy Swiss-Prot
Match: HSP7C_ICTPU (Heat shock cognate 71 kDa protein OS=Ictalurus punctatus GN=hsc70 PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 7.349e-37
Identity = 78/150 (52.00%), Postives = 99/150 (66.00%), Query Frame = 1
Query:    4 KITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ-------XXXXXXXXXXXXXXXXXXXSAAGPKIEEVD 432
            KITITNDKGRLSK++IE+MVQEAEKYKAED+  + KV AKN LE+YA+NM++TV+DEK+  K+   DK KI D  ++ I WLD NQ AE DE+E + K+LE +CNPII K+YQ                           ++GP IEEVD
Sbjct:  500 KITITNDKGRLSKEDIERMVQEAEKYKAEDDVQRDKVSAKNGLESYAFNMKSTVEDEKLKGKISDEDKHKILDKCNEVISWLDKNQTAEKDEYEHQQKDLEKVCNPIITKLYQSDGGMPGGMPDGMPGGFQELGAAPGGGSSGPTIEEVD 649          
BLAST of CN185803 vs. ExPASy Swiss-Prot
Match: HSP7D_MANSE (Heat shock 70 kDa protein cognate 4 OS=Manduca sexta PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 9.598e-37
Identity = 78/153 (50.98%), Postives = 102/153 (66.67%), Query Frame = 1
Query:    4 KITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQXXXXXXXXXXXXXXXXXXXS----------AAGPKIEEVD 432
            KITITNDKGRLSK+EIE+MV EAEKY+ EDE+ K+ ++AKNALE+Y +NM++T++DEK+  K+  +DK+ I D  +  I+WLDSNQLA+ +E+E K KELE ICNPII K+YQ                   +           AGP IEEVD
Sbjct:  500 KITITNDKGRLSKEEIERMVNEAEKYRNEDEKQKETIQAKNALESYCFNMKSTMEDEKLKDKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGICNPIITKLYQGAGGMPGGMPGGMPGFPGGAPGAGGAAPGGGAGPTIEEVD 652          
BLAST of CN185803 vs. ExPASy Swiss-Prot
Match: HSP7C_ORYLA (Heat shock cognate 71 kDa protein OS=Oryzias latipes GN=hsc70 PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 9.598e-37
Identity = 71/113 (62.83%), Postives = 90/113 (79.65%), Query Frame = 1
Query:    4 KITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 342
            KITITNDKGRLSK++IE+MVQEAEKYKAED+  + KV AKN LE+YA+NM++TV+DEK+  K+   DK+KI D  ++ I WLD NQ AE DE+  + KELE +CNPII K+YQ
Sbjct:  498 KITITNDKGRLSKEDIERMVQEAEKYKAEDDVQRDKVSAKNGLESYAFNMKSTVEDEKLAGKISDEDKQKILDKCNEVISWLDKNQTAERDEYVHQQKELEKVCNPIITKLYQ 610          
The following BLAST results are available for this feature:
BLAST of CN185803 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 187
Match NameE-valueIdentityDescription
HSP70_ONCTS1.481e-3749.65Heat shock 70 kDa protein OS=Oncorhynchus tschawyt... [more]
HS71L_MACFA1.481e-3755.24Heat shock 70 kDa protein 1-like OS=Macaca fascicu... [more]
HSP7C_DANRE1.934e-3753.33Heat shock cognate 71 kDa protein OS=Danio rerio G... [more]
HS71B_MOUSE1.934e-3754.55Heat shock 70 kDa protein 1B OS=Mus musculus GN=Hs... [more]
HS71L_BOVIN3.299e-3754.55Heat shock 70 kDa protein 1-like OS=Bos taurus GN=... [more]
HSP71_RAT4.309e-3755.24Heat shock 70 kDa protein 1A/1B OS=Rattus norvegic... [more]
HSP70_HYDMA4.309e-3752.03Heat shock 70 kDa protein OS=Hydra magnipapillata ... [more]
HSP7C_ICTPU7.349e-3752.00Heat shock cognate 71 kDa protein OS=Ictalurus pun... [more]
HSP7D_MANSE9.598e-3750.98Heat shock 70 kDa protein cognate 4 OS=Manduca sex... [more]
HSP7C_ORYLA9.598e-3762.83Heat shock cognate 71 kDa protein OS=Oryzias latip... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001O07_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001O07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185803 ID=CN185803; Name=CN185803; organism=Citrus sinensis; type=EST; length=630bp
ATGAAGATCACAATCACCAACGACAAGGGTAGATTGTCAAAGGATGAAAT
TGAGAAGATGGTTCAAGAGGCCGAGAAGTACAAGGCTGAAGATGAGGAGC
ACAAGAAGAAGGTCGAGGCCAAGAATGCCTTGGAAAACTATGCCTACAAT
ATGAGGAACACTGTCAAGGACGAGAAGATCGGCTCCAAACTTGATCCAGC
TGACAAGAAGAAGATTGAGGATGCCATTGACCAGGCAATTCAATGGCTTG
ATAGCAACCAGCTGGCTGAGGCCGATGAATTTGAAGACAAGATGAAGGAG
CTTGAGAGCATCTGCAATCCCATCATTGCCAAGATGTATCAAGGTGCTGG
TGGTGATATGGGCGGTGACATGGATGATGATACTCCTCCAGCTGGTGGCA
GTGCCGCCGGTCCCAAGATTGAGGAAGTTGACTAAGCTTCCAGTTTATTT
TGCTGTGTTTGTGGGAGGTCGGTTTTTTGACGGTGGGAAAACTGGACGTT
TGGTTTTTATCTTATGTTGCTTTAGCCTTAGGATGAATATTAATTTTTCC
TTTTCTTTTTATTTTTCAAATTTTACTTTTAATTCGGACCAATTTATATA
ATGAATATTTTTCAGTCCCTAAAAAAAAAA
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