CN185802

Overview
NameCN185802
Unique NameCN185802
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length623
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185802 vs. ExPASy Swiss-Prot
Match: DNAK_NITMS (Chaperone protein dnaK OS=Nitrosopumilus maritimus (strain SCM1) GN=dnaK PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.767e-11
Identity = 39/113 (34.51%), Postives = 67/113 (59.29%), Query Frame = -1
Query:  282 KITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 620
            KITI   K +LS++EIEK+ ++AEK+  ED++ K+K++ KN  E+Y Y     V  + +  K+      KI DA+ +  + LD     E +E + K++ L+SI N +  ++Y+
Sbjct:  476 KITIET-KTKLSEEEIEKLKEDAEKFSEEDKKKKEKIDLKNEAESYIYTTEKLVNHD-LKDKISQEQGIKITDAVKEVKEVLDK----EPEELKPKLEALQSIVNEVTTELYK 582          
BLAST of CN185802 vs. ExPASy Swiss-Prot
Match: DNAK_ACIC5 (Chaperone protein dnaK OS=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) GN=dnaK PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.308e-11
Identity = 39/114 (34.21%), Postives = 68/114 (59.65%), Query Frame = -1
Query:  282 RKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 623
            +KITIT+  G LSK+E+E+M +EAE + AED+  + ++EA+N L+N  YN+   +K+   G K+   +K ++E A+  A + L+    AE  E     ++L +  + +   MY+
Sbjct:  491 QKITITSSSG-LSKEEVERMAKEAEAHSAEDKAKRDEIEARNQLDNLVYNIEKMLKEN--GDKVSGEEKAEVETALADAKKTLEGTPTAE--ELNAAREKLTASSHKLAEAMYK 599          
BLAST of CN185802 vs. ExPASy Swiss-Prot
Match: HSP75_KLUMA (Heat shock protein SSB OS=Kluyveromyces marxianus GN=SSB PE=3 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 3.014e-11
Identity = 39/91 (42.86%), Postives = 56/91 (61.54%), Query Frame = -1
Query:  345 ITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADE 617
            ITI+N  GRLS +EIE+MV +AE++KA DE   KK EA+  LE+Y  +++ TV D  + +K+    K K+E A+  A   L     A AD+
Sbjct:  505 ITISNAIGRLSSEEIEQMVNQAEEFKAADEAFAKKHEARQRLESYISSVQQTVTDPVLSAKIKRNAKAKVEAALADAFSTLQIED-ASADD 594          
BLAST of CN185802 vs. ExPASy Swiss-Prot
Match: HSP75_KLULA (Heat shock protein SSB OS=Kluyveromyces lactis GN=SSB PE=3 SV=3)

HSP 1 Score: 68.5514 bits (166), Expect = 3.014e-11
Identity = 37/90 (41.11%), Postives = 54/90 (60.00%), Query Frame = -1
Query:  348 ITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEAD 617
            ITI+N  GRLS +EIE+MV +AE++KA DE   KK EA+  LE+Y  ++  TV D  + +K+    K K+E A+ +A   L     +  D
Sbjct:  505 ITISNAIGRLSSEEIEQMVNQAEEFKAADEAFAKKHEARQRLESYISSVEQTVTDPVLSAKIKRNAKAKVEAALAEAFSTLQIEDASTDD 594          
BLAST of CN185802 vs. ExPASy Swiss-Prot
Match: DNAK_CLONN (Chaperone protein dnaK OS=Clostridium novyi (strain NT) GN=dnaK PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.141e-11
Identity = 42/112 (37.50%), Postives = 62/112 (55.36%), Query Frame = -1
Query:  282 ITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 617
            ITIT     LS DEI+K V+EAEK+ AEDE+ K+ VE KN  ++  Y     +KD  +G K++ ADKK +E+ ++   Q  D   L   +  +    EL      + +K+YQ
Sbjct:  471 ITITASTN-LSDDEIDKAVKEAEKFAAEDEKRKESVEVKNNADSALYQTEKALKD--LGDKVEEADKKNVEEKLEALRQVKDGEDL---EAIKKATTELTEEFYKVSSKLYQ 576          
BLAST of CN185802 vs. ExPASy Swiss-Prot
Match: DNAK_CAMLR (Chaperone protein dnaK OS=Campylobacter lari (strain RM2100 / D67 / ATCC BAA-1060) GN=dnaK PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.141e-11
Identity = 38/114 (33.33%), Postives = 66/114 (57.89%), Query Frame = -1
Query:  282 RKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 623
            ++I IT   G LS++EI  MV++AE +K ED + K+ VEA+N+ ++  + +  ++ +  +G K+   DK  I+ A+D   + L  N  A  +E E KMK L  + + +   MY+
Sbjct:  491 QEIKITGSSG-LSEEEINNMVKDAELHKEEDRKRKEAVEARNSADSLVHQVEKSLSE--LGEKVSDEDKANIQKALDDLKETL-KNANASKEEIESKMKTLSEVSHKLAENMYK 600          
BLAST of CN185802 vs. ExPASy Swiss-Prot
Match: HSP75_SCHPO (Heat shock protein sks2 OS=Schizosaccharomyces pombe GN=sks2 PE=1 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 6.715e-11
Identity = 31/82 (37.80%), Postives = 52/82 (63.41%), Query Frame = -1
Query:  372 ITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLD 617
            I ITN  G LS  +I++M++ A+K+K +D++  KK+EAK+ LE+Y  N+  T+ +  +  KL   DK KIE  + + +  L+
Sbjct:  504 IEITNSVGHLSSTKIQEMIENADKFKQQDKDFAKKLEAKSQLESYISNIETTISEPNVMMKLKRGDKSKIEAQLAECMSQLE 585          
BLAST of CN185802 vs. ExPASy Swiss-Prot
Match: DNAK_WOLPP (Chaperone protein dnaK OS=Wolbachia pipientis subsp. Culex pipiens (strain wPip) GN=dnaK PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 8.770e-11
Identity = 37/114 (32.46%), Postives = 66/114 (57.89%), Query Frame = -1
Query:  282 RKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 623
            +KI I +  G LS+DEI +MV+EAE+   EDE+ KK +E KN  ++  ++   ++ +   G K+ P DK  IE+A+++  +   S+ + +AD  + K+  L  +   +   MY+
Sbjct:  491 QKIRIQSSGG-LSEDEINRMVREAEEKAQEDEKRKKFIEVKNQADSLVHSTEKSLTE--YGDKISPEDKSAIENAVNELKEVSKSDNIDDADSIQQKVTNLSQLSMKLGEAMYK 601          
BLAST of CN185802 vs. ExPASy Swiss-Prot
Match: DNAK_METI4 (Chaperone protein dnaK OS=Methylacidiphilum infernorum (isolate V4) GN=dnaK PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 8.770e-11
Identity = 39/114 (34.21%), Postives = 66/114 (57.89%), Query Frame = -1
Query:  282 RKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQ 623
            +KITIT   G LSK+EIE+M +EAE Y+ +D ++K++ EAKN  +N AY     +++   G K+D A K ++E  I++  + +  +   + +  +  M EL      I  +MY+
Sbjct:  494 QKITITGSSG-LSKEEIERMTKEAEAYREQDLKNKERAEAKNNADNAAYQAEKLLRE--YGDKVDSAKKMEVEKCIEKVREVIKGD---DTEAIKRAMDELNEKVQAISVEMYR 601          
The following BLAST results are available for this feature:
BLAST of CN185802 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 189
Match NameE-valueIdentityDescription
DNAK_NITMS1.767e-1134.51Chaperone protein dnaK OS=Nitrosopumilus maritimus... [more]
DNAK_ACIC52.308e-1134.21Chaperone protein dnaK OS=Acidobacterium capsulatu... [more]
HSP75_KLUMA3.014e-1142.86Heat shock protein SSB OS=Kluyveromyces marxianus ... [more]
HSP75_KLULA3.014e-1141.11Heat shock protein SSB OS=Kluyveromyces lactis GN=... [more]
DNAK_CLONN5.141e-1137.50Chaperone protein dnaK OS=Clostridium novyi (strai... [more]
DNAK_CAMLR5.141e-1133.33Chaperone protein dnaK OS=Campylobacter lari (stra... [more]
HSP75_SCHPO6.715e-1137.80Heat shock protein sks2 OS=Schizosaccharomyces pom... [more]
DNAK_WOLPP8.770e-1132.46Chaperone protein dnaK OS=Wolbachia pipientis subs... [more]
DNAK_METI48.770e-1134.21Chaperone protein dnaK OS=Methylacidiphilum infern... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001O07_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001O07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185802 ID=CN185802; Name=CN185802; organism=Citrus sinensis; type=EST; length=623bp
TTTTAGGGACTGAAAATATTCATTATATAAATTGGTCCGAATTACCAGTA
AAATTTGAAAAATAAAAAGAAAAGGAAAAATTAATATTCATCCTAAGGCT
AAAGCAACATAAGATAAAAACCAAACGTCCAGTTTTCCCACCGTCAAAAA
ACCGACCTCCCACAAACACAGCAAAATAAACTGGAAGCTTAGTCAACTTC
CTCAATCTTGGGACCGGCGGCACTGCCACCAGCTGGAGGAGTATCATCAT
CCATGTCACCGCCCATATCACCACCAGCACCTTGATACATCTTGGCAATG
ATGGGATTGCAGATGCTCTCAAGCTCCTTCATCTTGTCTTCAAATTCATC
GGCCTCAGCCAGCTGGTTGCTATCAAGCCATTGAATTGCCTGGTCAATGG
CATCCTCAATCTTCTTCTTGTCAGCTGGATCAAGTTTGGAGCCGATCTTC
TCGTCCTTGACAGTGTTCCTCATATTGTAGGCATAGTTTTCCAAGGCATT
CTTGGCCTCGACCTTCTTCTTGTGCTCCTCATCTTCAGCCTTGTACTTCT
CGGCCTCTTGAACCATCTTCTCAATTTCATCCTTTGACAATCTACCCTTG
TCGTTGGTGATTGTGATCTTCCT
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