CN185801

Overview
NameCN185801
Unique NameCN185801
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length741
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185801 vs. ExPASy Swiss-Prot
Match: Y1765_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS=Arabidopsis thaliana GN=At1g07650 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.197e-20
Identity = 54/133 (40.60%), Postives = 79/133 (59.40%), Query Frame = -2
Query:  354 ICDFGLAKWLXEQWTHHTISKVEGTFGYLAPEFLMHGIVDEKTDVFAFGVLLLELVTGRRALDYSQQS----LVLWARPMIKRNEIRELVDASLADEYDTRQMNLVLLAASLCIQQSSIRRPQMSQVVQLLRG 740
            I DFGLAK L +    H  +++ GT GY+APE+ M G + EK DV++FGV+ LE+V+G+   ++        L+ WA  + +R  + ELVD +LA +Y   +  L+L  A +C   S   RP MSQVV L+ G
Sbjct:  821 ISDFGLAK-LNDDGNTHISTRIAGTIGYMAPEYAMRGYLTEKADVYSFGVVALEIVSGKSNTNFRPTEDFVYLLDWAYVLQERGSLLELVDPTLASDYSEEEAMLMLNVALMCTNASPTLRPTMSQVVSLIEG 952          
BLAST of CN185801 vs. ExPASy Swiss-Prot
Match: Y2296_ARATH (Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana GN=At2g42960 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.748e-20
Identity = 52/134 (38.81%), Postives = 82/134 (61.19%), Query Frame = -2
Query:  351 ICDFGLAKWLXEQWTHHTISKVEGTFGYLAPEFLMHGIVDEKTDVFAFGVLLLELVTGRRALDY----SQQSLVLWARPMIKRNEIRELVDASLADEYDTRQMNLVLLAASLCIQQSSIRRPQMSQVVQLLRGN 740
            + DFGLAK L    +H T ++V GTFGY+APE+   G+++EK+D+++FGVLLLE +TGR  +DY    ++ +LV W + M+      E+VD  L        +   LL +  C+   + +RP+MSQV ++L  +
Sbjct:  325 LSDFGLAKLLDSGESHIT-TRVMGTFGYVAPEYANTGLLNEKSDIYSFGVLLLEAITGRDPVDYGRPANEVNLVEWLKMMVGTRRAEEVVDPRLEPRPSKSALKRALLVSLRCVDPEAEKRPRMSQVARMLESD 457          
BLAST of CN185801 vs. ExPASy Swiss-Prot
Match: Y5457_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana GN=At5g45780 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.895e-20
Identity = 56/132 (42.42%), Postives = 78/132 (59.09%), Query Frame = -2
Query:  354 DFGLAKWLXEQWTHHTISKVEGTFGYLAPEFLMHGIVDEKTDVFAFGVLLLELVTGRRALDYS----QQSLVL-WARPMIKRNEIRELVDASLADEYDTRQMNLVLLAASLCIQQSSIRRPQMSQVVQLLRG 734
            DFGLAK L +Q   H  + V GT G++APE+L  G   EKTDVF FGVL+LEL+TG + +D      ++ ++L W R +       E+VD  L  E+D   +  V+  A LC Q     RP+MSQV+++L G
Sbjct:  444 DFGLAK-LLDQRDSHVTTAVRGTIGHIAPEYLSTGQSSEKTDVFGFGVLILELITGHKMIDQGNGQVRKGMILSWVRTLKAEKRFAEMVDRDLKGEFDDLVLEEVVELALLCTQPHPNLRPRMSQVLKVLEG 574          
BLAST of CN185801 vs. ExPASy Swiss-Prot
Match: RLCK7_ARATH (Probable serine/threonine-protein kinase RLCKVII OS=Arabidopsis thaliana GN=At1g07870 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.895e-20
Identity = 53/132 (40.15%), Postives = 82/132 (62.12%), Query Frame = -2
Query:  360 ICDFGLAKWLXEQWTHHTISKVEGTFGYLAPEFLMHGIVDEKTDVFAFGVLLLELVTGRRALDYSQ----QSLVLWARPMIK-RNEIRELVDASLADEYDTRQMNLVLLAASLCIQQSSIRRPQMSQVVQLL 740
            + DFGLAK        H  ++V GT+GY AP++ M G +  K+D+++FGV+LLEL+TGR+A+D ++    Q+LV WARP+ K R    ++VD  L  +Y  R +   L  +++C+Q+    RP +S VV  L
Sbjct:  246 LSDFGLAKVGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDNTKTRKDQNLVGWARPLFKDRRNFPKMVDPLLQGQYPVRGLYQALAISAMCVQEQPTMRPVVSDVVLAL 377          
BLAST of CN185801 vs. ExPASy Swiss-Prot
Match: Y1534_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53420 OS=Arabidopsis thaliana GN=At1g53420 PE=2 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 8.349e-20
Identity = 51/133 (38.35%), Postives = 82/133 (61.65%), Query Frame = -2
Query:  354 ICDFGLAKWLXEQWTHHTISKVEGTFGYLAPEFLMHGIVDEKTDVFAFGVLLLELVTGR-RALDYSQQS---LVLWARPMIKRNEIRELVDASLADEYDTRQMNLVLLAASLCIQQSSIRRPQMSQVVQLLRG 740
            I DFGLAK L E+ + H  +++ GTFGY+APE+ M G + +K DV++FG++ LE+V GR   ++ S+ +   L+ W   + ++N + ELVD  L  EY+  +   ++  A +C       RP MS+VV++L G
Sbjct:  766 ISDFGLAK-LDEEDSTHISTRIAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIVHGRSNKIERSKNNTFYLIDWVEVLREKNNLLELVDPRLGSEYNREEAMTMIQIAIMCTSSEPCERPSMSEVVKMLEG 897          
BLAST of CN185801 vs. ExPASy Swiss-Prot
Match: Y5344_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana GN=At1g53440 PE=1 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 1.860e-19
Identity = 57/168 (33.93%), Postives = 92/168 (54.76%), Query Frame = -2
Query:  249 ICDFGLAKWLXEQWTHHTISKVEGTFGYLAPEFLMHGIVDEKTDVFAFGVLLLELVTGRRALDYSQQS----LVLWARPMIKRNEIRELVDASLADEYDTRQMNLVLLAASLCIQQSSIRRPQMSQVVQLLRGNLCCLKYMTKCRSPLLRKTLREELKSAPK*KRIYH 740
            I DFGLAK L E+   H  +++ GT GY+APE+ M G + +K DV++FGV+ LE+V+G+   +Y  +     L+ WA  + ++  + ELVD  L   +  ++   +L  A LC   S   RP MS VV +L+G +       K + PL+++       +A + K + H
Sbjct:  809 ISDFGLAK-LDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVCLEIVSGKSNTNYRPKEEFIYLLDWAYVLQEQGSLLELVDPDLGTSFSKKEAMRMLNIALLCTNPSPTLRPPMSSVVSMLQGKI-------KVQPPLVKREADPSGSAAMRFKALEH 968          
BLAST of CN185801 vs. ExPASy Swiss-Prot
Match: Y2197_ARATH (Probable protein kinase At2g41970 OS=Arabidopsis thaliana GN=At2g41970 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.860e-19
Identity = 48/132 (36.36%), Postives = 83/132 (62.88%), Query Frame = -2
Query:  357 ICDFGLAKWLXEQWTHHTISKVEGTFGYLAPEFLMHGIVDEKTDVFAFGVLLLELVTGRRALDYS----QQSLVLWARPMIKRNEIRELVDASLADEYDTRQMNLVLLAASLCIQQSSIRRPQMSQVVQLLR 740
            + DF L     +       ++V GTFGY APE+ M G + +K+DV++FGV+LLEL+TGR+ +D++    QQSLV WA P +  +++++ +D  L +++  + +  +   A+LC+Q  +  RP M+ VV+ L+
Sbjct:  220 MADFNLTNASSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCIDPKLNNDFPPKAVAKLAAVAALCVQYEADFRPNMTIVVKALQ 351          
BLAST of CN185801 vs. ExPASy Swiss-Prot
Match: FEI2_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 2 OS=Arabidopsis thaliana GN=FEI2 PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.173e-19
Identity = 58/146 (39.73%), Postives = 86/146 (58.90%), Query Frame = -2
Query:  315 ICDFGLAKWLXEQWTHHTISKVEGTFGYLAPEFLMHGIVDEKTDVFAFGVLLLELVTGRRALDYS----QQSLVLWARPMIKRNEIRELVDASLADEYDTRQMNLVLLAASLCIQQSSIRRPQMSQVVQLLRGNLCCLKYMTKCRS 740
            + DFGLAK L ++ +H T + V GTFGYLAPE++  G   EKTDV++FGVL+LE+++G+   D S      ++V W   +I  N  +E+VD S  +  +   ++ +L  A+ C+  S   RP M +VVQLL   +     MT C S
Sbjct:  443 VSDFGLAKLLEDEESHIT-TIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKLPTDASFIEKGFNIVGWLNFLISENRAKEIVDLS-CEGVERESLDALLSIATKCVSSSPDERPTMHRVVQLLESEV-----MTPCPS 581          
BLAST of CN185801 vs. ExPASy Swiss-Prot
Match: Y1561_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56130 OS=Arabidopsis thaliana GN=At1g56130 PE=1 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 4.143e-19
Identity = 57/135 (42.22%), Postives = 85/135 (62.96%), Query Frame = -2
Query:  348 ICDFGLAKWLXEQWTHHTISKVEGTFGYLAPEFLMHGIVDEKTDVFAFGVLLLELVTGR----RALDYSQQSLVLWARPMIKRNEIRELVDASLADEYDTRQMNLVLLAASLCIQQSSIRRPQMSQVVQLLRGNL 740
            I DFGLAK   ++ TH + ++V GT GYLAPE+ M G + EKTDV+AFGV+ LELV+GR      L+  ++ L+ WA  + +++   EL+D  L D ++  +   ++  A LC Q S   RP MS+VV +L G++
Sbjct:  834 ISDFGLAKLYDDKKTHIS-TRVAGTIGYLAPEYAMRGHLTEKTDVYAFGVVALELVSGRPNSDENLEEEKKYLLEWAWNLHEKSRDIELIDDKLTD-FNMEEAKRMIGIALLCTQTSHALRPPMSRVVAMLSGDV 966          
BLAST of CN185801 vs. ExPASy Swiss-Prot
Match: Y5129_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g10290 OS=Arabidopsis thaliana GN=At5g10290 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.412e-19
Identity = 53/133 (39.85%), Postives = 84/133 (63.16%), Query Frame = -2
Query:  354 DFGLAKWLXEQWTHHTISKVEGTFGYLAPEFLMHGIVDEKTDVFAFGVLLLELVTGRRALDYSQQS------LVLWARPMIKRNEIRELVDASLADEYDTRQMNLVLLAASLCIQQSSIRRPQMSQVVQLLRG 734
            DFGLAK +  + T+ T ++V GT G++APE+L  G   E+TDVF +G++LLELVTG+RA+D+S+        L+   + + +   +  +VD +L  EY   ++ +++  A LC Q S   RP MS+VV++L G
Sbjct:  435 DFGLAKLVDVRRTNVT-TQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLGAIVDKNLDGEYIKEEVEMMIQVALLCTQGSPEDRPVMSEVVRMLEG 566          
The following BLAST results are available for this feature:
BLAST of CN185801 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 184
Match NameE-valueIdentityDescription
Y1765_ARATH2.197e-2040.60Probable LRR receptor-like serine/threonine-protei... [more]
Y2296_ARATH3.748e-2038.81Probable receptor-like protein kinase At2g42960 OS... [more]
Y5457_ARATH4.895e-2042.42Probable LRR receptor-like serine/threonine-protei... [more]
RLCK7_ARATH4.895e-2040.15Probable serine/threonine-protein kinase RLCKVII O... [more]
Y1534_ARATH8.349e-2038.35Probable LRR receptor-like serine/threonine-protei... [more]
Y5344_ARATH1.860e-1933.93Probable LRR receptor-like serine/threonine-protei... [more]
Y2197_ARATH1.860e-1936.36Probable protein kinase At2g41970 OS=Arabidopsis t... [more]
FEI2_ARATH3.173e-1939.73LRR receptor-like serine/threonine-protein kinase ... [more]
Y1561_ARATH4.143e-1942.22Probable LRR receptor-like serine/threonine-protei... [more]
Y5129_ARATH5.412e-1939.85Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001O06_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001O06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185801 ID=CN185801; Name=CN185801; organism=Citrus sinensis; type=EST; length=741bp
TTTTTTTATCAATTTTCTTTATAAATTGATTTGATACACGGGGTTTTCCA
GTGTATGTCCGGGTTCTGAAAATTCATCCGGATACCGCATTTATGTACAT
TATTTAAAATATATAACGAATTCTCACTATCAAAAAAAAAAAAAAAGAAT
TCTCATCATTTACCCTCAGTCCTAGTCTCCTGCACTAATATTTCTTTTGC
TCTCTCATTCTCCTTTGAATTTTTCTTAAATATGTACAAAAAGCAGGGGT
GATAAATTCGTTTTCATTTTGGTGCGCTCTTAAGCTCTTCACGGAGAGTT
TTTCGTAACAGTGGTGACCGACATTTTGTCATGTACTTCAAGCAGCAAAG
ATTGCCCCTGAGTAGCTGTACCACCTGACTCATTTGGGGCCGTCGAATTG
AAGACTGTTGTATACACAGCGAAGCCGCCAATAGTACCAGATTCATCTGC
CGGGTATCGTACTCATCTGCTAGGGAGGCATCAACTAGCTCTCTAATTTC
ATTCCTCTTTATCATAGGCCTTGCCCATAATACAAGGCTTTGCTGAGAGT
AATCAAGAGCTCGGCGTCCTGTGACCAATTCCAGTAGTAATACACCGAAG
GCAAAGACGTCGGTCTTTTCATCTACTATCCCATGCATTAAGAACTCAGG
AGCAAGATAGCCAAACGTGCCTTCAACTTTTGATATTGTGTGATGAGTCC
ATTGCTCANGTAGCCATTTCGCTAGTCCAAAATCACAAATC
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