CN185801

Overview
NameCN185801
Unique NameCN185801
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length741
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185801 vs. ExPASy Swiss-Prot
Match: BRL2_ARATH (Serine/threonine-protein kinase BRI1-like 2 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.084e-11
Identity = 42/146 (28.77%), Postives = 71/146 (48.63%), Query Frame = -2
Query:  357 ICDFGLAKWLXEQWTHHTISKVEGTFGYLAPEFLMHGIVDEKTDVFAFGVLLLELVTGRRALD---YSQQSLVLWARPMIKRNEIRELVDASLADEYDTRQMN---------------LVLLAASLCIQQSSIRRPQMSQVVQLLR 740
            + DFG+A+ +    TH ++S + GT GY+ PE+        K DV++ GV++LE+++G+R  D   +   +LV W++   +  +  E++D  L  E  +  +N                 L  A  C+     +RP M QVV  LR
Sbjct:  982 VSDFGMARLISALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSIGVVMLEILSGKRPTDKEEFGDTNLVGWSKMKAREGKHMEVIDEDLLKEGSSESLNEKEGFEGGVIVKEMLRYLEIALRCVDDFPSKRPNMLQVVASLR 1127          
BLAST of CN185801 vs. ExPASy Swiss-Prot
Match: Y5597_ARATH (Probable receptor-like protein kinase At5g59700 OS=Arabidopsis thaliana GN=At5g59700 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.252e-11
Identity = 37/128 (28.91%), Postives = 63/128 (49.22%), Query Frame = -2
Query:  369 ICDFGLAKWLXEQWTHHTISKVEGTFGYLAPEFLMHGIVDEKTDVFAFGVLLLELVTGRRALD----YSQQSLVLWARPMIKRNEIRELVDASLADEYDTRQMNLVLLAASLCIQQSSIRRPQMSQVV 740
            + DFGL+K   E    H  + V+G+FGYL PE+     + EK+DV++FGV++ E++  R  +D        +L  WA    K+ ++  ++D SL  +     +         C+    + RP M  V+
Sbjct:  622 VADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVMFEVLCARPVIDPTLTREMVNLAEWAMKWQKKGQLEHIIDPSLRGKIRPDSLRKFGETGEKCLADYGVDRPSMGDVL 749          
BLAST of CN185801 vs. ExPASy Swiss-Prot
Match: WAKLL_ARATH (Putative wall-associated receptor kinase-like 13 OS=Arabidopsis thaliana GN=WAKL13 PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.252e-11
Identity = 40/128 (31.25%), Postives = 72/128 (56.25%), Query Frame = -2
Query:  372 ICDFGLAKWLXEQWTHHTISKVEGTFGYLAPEFLMHGIVDEKTDVFAFGVLLLELVTGRR---ALDYSQQ--SLVLWARPMIKRNEIRELVDASLADEYDTRQMNLVLLAASLCIQQSSIRRPQMSQV 740
            + DFG ++ +    TH T + + GT GY+ PE+       EK+DV++FGV+L+EL+TG +    L  +Q+   L  + R  ++ N + E++DA + ++    Q+  V   A  C++++   RP M +V
Sbjct:  595 VSDFGTSRSVSIDHTHWT-TVISGTVGYVDPEYYGSSHFTEKSDVYSFGVVLVELITGEKPVITLSETQEITGLADYFRLAMRENRLFEIIDARIRNDCKLEQVIAVANLALRCLKKTGKTRPDMREV 721          
BLAST of CN185801 vs. ExPASy Swiss-Prot
Match: FERON_ARATH (Receptor-like protein kinase FERONIA OS=Arabidopsis thaliana GN=FER PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.252e-11
Identity = 42/128 (32.81%), Postives = 62/128 (48.44%), Query Frame = -2
Query:  369 ICDFGLAKWLXEQWTHHTISKVEGTFGYLAPEFLMHGIVDEKTDVFAFGVLLLELVTGRRALD----YSQQSLVLWARPMIKRNEIRELVDASLADEYDTRQMNLVLLAASLCIQQSSIRRPQMSQVV 740
            + DFGL+K        H  + V+G+FGYL PE+     + EK+DV++FGV+L E +  R AL+      Q SL  WA    K+  + ++VD  L  +            A  C+    I RP M  V+
Sbjct:  677 VSDFGLSKTGPTLDHTHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEALCARPALNPTLAKEQVSLAEWAPYCYKKGMLDQIVDPYLKGKITPECFKKFAETAMKCVLDQGIERPSMGDVL 804          
The following BLAST results are available for this feature:
BLAST of CN185801 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 184
Match NameE-valueIdentityDescription
BRL2_ARATH7.084e-1128.77Serine/threonine-protein kinase BRI1-like 2 OS=Ara... [more]
Y5597_ARATH9.252e-1128.91Probable receptor-like protein kinase At5g59700 OS... [more]
WAKLL_ARATH9.252e-1131.25Putative wall-associated receptor kinase-like 13 O... [more]
FERON_ARATH9.252e-1132.81Receptor-like protein kinase FERONIA OS=Arabidopsi... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001O06_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001O06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185801 ID=CN185801; Name=CN185801; organism=Citrus sinensis; type=EST; length=741bp
TTTTTTTATCAATTTTCTTTATAAATTGATTTGATACACGGGGTTTTCCA
GTGTATGTCCGGGTTCTGAAAATTCATCCGGATACCGCATTTATGTACAT
TATTTAAAATATATAACGAATTCTCACTATCAAAAAAAAAAAAAAAGAAT
TCTCATCATTTACCCTCAGTCCTAGTCTCCTGCACTAATATTTCTTTTGC
TCTCTCATTCTCCTTTGAATTTTTCTTAAATATGTACAAAAAGCAGGGGT
GATAAATTCGTTTTCATTTTGGTGCGCTCTTAAGCTCTTCACGGAGAGTT
TTTCGTAACAGTGGTGACCGACATTTTGTCATGTACTTCAAGCAGCAAAG
ATTGCCCCTGAGTAGCTGTACCACCTGACTCATTTGGGGCCGTCGAATTG
AAGACTGTTGTATACACAGCGAAGCCGCCAATAGTACCAGATTCATCTGC
CGGGTATCGTACTCATCTGCTAGGGAGGCATCAACTAGCTCTCTAATTTC
ATTCCTCTTTATCATAGGCCTTGCCCATAATACAAGGCTTTGCTGAGAGT
AATCAAGAGCTCGGCGTCCTGTGACCAATTCCAGTAGTAATACACCGAAG
GCAAAGACGTCGGTCTTTTCATCTACTATCCCATGCATTAAGAACTCAGG
AGCAAGATAGCCAAACGTGCCTTCAACTTTTGATATTGTGTGATGAGTCC
ATTGCTCANGTAGCCATTTCGCTAGTCCAAAATCACAAATC
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