CN185801

Overview
NameCN185801
Unique NameCN185801
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length741
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185801 vs. ExPASy Swiss-Prot
Match: Y1755_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07550 OS=Arabidopsis thaliana GN=At1g07550 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.274e-17
Identity = 53/144 (36.81%), Postives = 86/144 (59.72%), Query Frame = -2
Query:  318 ICDFGLAK-WLXEQWTHHTISKVEGTFGYLAPEFLMHGIVDEKTDVFAFGVLLLELVTGRRALDYSQQ--SLVLWARPMIKRNEIRELVDASLADEYDTRQMNLVLLAASLCIQQSSIRRPQMSQVVQLLRGNLCCLKYMTKCR 740
            I DFGL++ +L       T+  V GTFGYL PE+    ++  K+DV++FGV+LLE+++G+  +D S++  ++V W   +++  +I  +VD +L  +YDT     V+  A  C+ ++S  RP MSQVV +L     CL+   K R
Sbjct:  700 IADFGLSRSFLIGNEAQPTV--VAGTFGYLDPEYHKTSLLSMKSDVYSFGVVLLEIISGQDVIDLSRENCNIVEWTSFILENGDIESIVDPNLHQDYDTSSAWKVVELAMSCVNRTSKERPNMSQVVHVLNE---CLETCEKWR 838          
BLAST of CN185801 vs. ExPASy Swiss-Prot
Match: SRF8_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana GN=SRF8 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.969e-17
Identity = 55/132 (41.67%), Postives = 77/132 (58.33%), Query Frame = -2
Query:  360 ICDFGLAKWLXEQWTHHTISKVEGTFGYLAPEFLMHGIVDEKTDVFAFGVLLLELVTGRRALDYS----QQSLVLWARPMIKR-NEIRELVDASLADEYDTRQMNLVLLAASLCIQQSSIRRPQMSQVVQLL 740
            + D GLA  L         ++V G+FGY APEF + GI   K+DV+ FGV++LEL+TGR+ LD S    +QSLV WA P +   + + ++VD SL   Y  + ++      +LCIQ     RP MS+VVQ L
Sbjct:  539 LSDSGLAA-LTPNTERQVSTQVVGSFGYSAPEFALSGIYTVKSDVYTFGVVMLELLTGRKPLDSSRTRAEQSLVRWATPQLHDIDALSKMVDPSLNGMYPAKSLSRFADIIALCIQPEPEFRPPMSEVVQQL 669          
BLAST of CN185801 vs. ExPASy Swiss-Prot
Match: RKF3_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RKF3 OS=Arabidopsis thaliana GN=RKF3 PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.878e-17
Identity = 47/134 (35.07%), Postives = 82/134 (61.19%), Query Frame = -2
Query:  351 ICDFGLAKWLXEQWTHHTISKVEGTFGYLAPEFLMHGIVDEKTDVFAFGVLLLELVTGRRALDYSQQ----SLVLWARPMIKRNEIRELVDASLADEYDTRQMNLVLLAASLCIQQSSIRRPQMSQVVQLLRGN 740
            + DFGLAK+  E  TH + ++V GT GY+APE+ ++G + EK+DV++FGV+LLEL++ R+A+   ++    S+  WA  +++  +  ++V+  + ++     +   +L A LC       RP M QVV++L  N
Sbjct:  428 VADFGLAKFNPEGMTHMS-TRVAGTMGYVAPEYALYGQLTEKSDVYSFGVVLLELLSRRKAIVTDEEGQPVSVADWAWSLVREGQTLDVVEDGMPEKGPPEVLEKYVLIAVLCSHPQLHARPTMDQVVKMLESN 560          
BLAST of CN185801 vs. ExPASy Swiss-Prot
Match: CRK33_ARATH (Putative cysteine-rich receptor-like protein kinase 33 OS=Arabidopsis thaliana GN=CRK33 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 5.065e-17
Identity = 46/135 (34.07%), Postives = 77/135 (57.04%), Query Frame = -2
Query:  351 ICDFGLAKWLXEQWTHHTISKVEGTFGYLAPEFLMHGIVDEKTDVFAFGVLLLELVTGRR-----ALDYSQQSLVLWARPMIKRNEIRELVDASLADEYDTRQMNLVLLAASLCIQQSSIRRPQMSQVVQLLRGN 740
            + DFG+A+      +     +V GT GY++PE+LMHG    K+DV++FGVL+LE+++G+R       D S ++LV +A    +     ELVD+ L   Y + ++   +  A LC+Q    +RP +S ++ +L  N
Sbjct:  462 VADFGMARIFRVDQSRADTRRVVGTHGYISPEYLMHGQFSVKSDVYSFGVLVLEIISGKRNSNFHETDESGKNLVTYAWRHWRNGSPLELVDSELEKNYQSNEVFRCIHIALLCVQNDPEQRPNLSTIIMMLTSN 596          
BLAST of CN185801 vs. ExPASy Swiss-Prot
Match: CRK23_ARATH (Putative cysteine-rich receptor-like protein kinase 23 OS=Arabidopsis thaliana GN=CRK23 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 5.065e-17
Identity = 46/132 (34.85%), Postives = 73/132 (55.30%), Query Frame = -2
Query:  360 ICDFGLAKWLXEQWTHHTISKVEGTFGYLAPEFLMHGIVDEKTDVFAFGVLLLELVTGRR-----ALDYSQQSLVLWARPMIKRNEIRELVDASLADEYDTRQMNLVLLAASLCIQQSSIRRPQMSQVVQLL 740
            + DFG+A+      T     +V GT+GY+APE+ M+G    K+DV++FGVL+ E+++G +      +D S  +LV +   +       +LVD S  D Y T  +   +  A LC+Q+    RP MS +VQ+L
Sbjct:  649 VADFGMARIFGMDQTEANTRRVVGTYGYMAPEYAMYGQFSMKSDVYSFGVLVFEIISGMKNSSLYQMDDSVSNLVTYTWRLWSNGSQLDLVDPSFGDNYQTHDITRCIHIALLCVQEDVDDRPNMSAIVQML 780          
BLAST of CN185801 vs. ExPASy Swiss-Prot
Match: CRK16_ARATH (Putative cysteine-rich receptor-like protein kinase 16 OS=Arabidopsis thaliana GN=CRK16 PE=2 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 5.065e-17
Identity = 47/139 (33.81%), Postives = 78/139 (56.12%), Query Frame = -2
Query:  339 ICDFGLAKWLXEQWTHHTISKVEGTFGYLAPEFLMHGIVDEKTDVFAFGVLLLELVTGRRA-----LDYSQQSLVLWARPMIKRNEIRELVDASLADEYDTRQMNLVLLAASLCIQQSSIRRPQMSQVVQLLRGNLCCL 740
            I DFG+A+      T  T  +V GTFGY+ PE++ +G    K+DV++FGVL+LE++ G+++     +D S  +LV +   +       ELVD ++ + YD  ++   +  + LC+Q++   RP MS V Q+L      L
Sbjct:  476 IADFGVARNFRVDQTEATTGRVVGTFGYMPPEYVANGQFSMKSDVYSFGVLILEIIVGKKSSSFHEIDGSVGNLVTYVWRLWNNESFLELVDPAMGESYDKDEVIRCIHISLLCVQENPADRPTMSTVFQMLTNTFLTL 614          
BLAST of CN185801 vs. ExPASy Swiss-Prot
Match: APK1B_ARATH (Protein kinase APK1B, chloroplastic OS=Arabidopsis thaliana GN=APK1B PE=2 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 6.615e-17
Identity = 49/132 (37.12%), Postives = 79/132 (59.85%), Query Frame = -2
Query:  360 ICDFGLAKWLXEQWTHHTISKVEGTFGYLAPEFLMHGIVDEKTDVFAFGVLLLELVTGRRALDYS----QQSLVLWARPMI-KRNEIRELVDASLADEYDTRQMNLVLLAASLCIQQSSIRRPQMSQVVQLL 740
            + DFGLAK        H  +++ GT+GY APE+L  G +  K+DV+++GV+LLE+++GRRA+D +    +Q LV WARP++  + ++  ++D  L D+Y   +   V   A  C+      RP M++VV  L
Sbjct:  220 LSDFGLAKDGPTGDKSHVSTRIMGTYGYAAPEYLATGHLTTKSDVYSYGVVLLEVLSGRRAVDKNRPPGEQKLVEWARPLLANKRKLFRVIDNRLQDQYSMEEACKVATLALRCLTFEIKLRPNMNEVVSHL 351          
BLAST of CN185801 vs. ExPASy Swiss-Prot
Match: APK1A_ARATH (Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.615e-17
Identity = 51/132 (38.64%), Postives = 79/132 (59.85%), Query Frame = -2
Query:  360 ICDFGLAKWLXEQWTHHTISKVEGTFGYLAPEFLMHGIVDEKTDVFAFGVLLLELVTGRRALDYS----QQSLVLWARP-MIKRNEIRELVDASLADEYDTRQMNLVLLAASLCIQQSSIRRPQMSQVVQLL 740
            + DFGLAK        H  ++V GT GY APE+L  G +  K+DV++FGV+LLEL++GRRA+D +    +++LV WA+P ++ + +I  ++D  L D+Y   +   V   +  C+      RP MS+VV  L
Sbjct:  219 LSDFGLAKDGPIGDKSHVSTRVMGTHGYAAPEYLATGHLTTKSDVYSFGVVLLELLSGRRAVDKNRPSGERNLVEWAKPYLVNKRKIFRVIDNRLQDQYSMEEACKVATLSLRCLTTEIKLRPNMSEVVSHL 350          
BLAST of CN185801 vs. ExPASy Swiss-Prot
Match: NORK_PEA (Nodulation receptor kinase OS=Pisum sativum GN=NORK PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 8.640e-17
Identity = 48/135 (35.56%), Postives = 77/135 (57.04%), Query Frame = -2
Query:  348 ICDFGLAKWLXEQWTHHTISKVEGTFGYLAPEFLMHGIVDEKTDVFAFGVLLLELVTGRRALDYS----QQSLVLWARPMIKRNEIRELVDASLADEYDTRQMNLVLLAASLCIQQSSIRRPQMSQVVQLLRGNL 740
            + DFG +K+  ++   +   +V GT GYL PE+     + EK+DVF+FGV+LLE+V+GR  L+      + SLV WA+P I+ +++ E+VD  +   Y    +  V+  A  C++  S  RP M  +V+ L   L
Sbjct:  737 VADFGFSKYAPQEGDSYVSLEVRGTAGYLDPEYYKTQQLSEKSDVFSFGVVLLEIVSGREPLNIKRPRVEWSLVEWAKPYIRASKVDEIVDPGIKGGYHAEALWRVVEVALQCLEPYSTYRPCMVDIVRELEDAL 871          
BLAST of CN185801 vs. ExPASy Swiss-Prot
Match: NORK_MEDTR (Nodulation receptor kinase OS=Medicago truncatula GN=NORK PE=1 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 8.640e-17
Identity = 48/135 (35.56%), Postives = 77/135 (57.04%), Query Frame = -2
Query:  348 ICDFGLAKWLXEQWTHHTISKVEGTFGYLAPEFLMHGIVDEKTDVFAFGVLLLELVTGRRALDYS----QQSLVLWARPMIKRNEIRELVDASLADEYDTRQMNLVLLAASLCIQQSSIRRPQMSQVVQLLRGNL 740
            + DFG +K+  ++   +   +V GT GYL PE+     + EK+DVF+FGV+LLE+V+GR  L+      + SLV WA+P I+ +++ E+VD  +   Y    +  V+  A  C++  S  RP M  +V+ L   L
Sbjct:  738 VADFGFSKYAPQEGDSYVSLEVRGTAGYLDPEYYKTQQLSEKSDVFSFGVVLLEIVSGREPLNIKRPRIEWSLVEWAKPYIRASKVDEIVDPGIKGGYHAEALWRVVEVALQCLEPYSTYRPCMVDIVRELEDAL 872          
The following BLAST results are available for this feature:
BLAST of CN185801 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 184
Match NameE-valueIdentityDescription
Y1755_ARATH2.274e-1736.81Probable LRR receptor-like serine/threonine-protei... [more]
SRF8_ARATH2.969e-1741.67Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsi... [more]
RKF3_ARATH3.878e-1735.07Probable LRR receptor-like serine/threonine-protei... [more]
CRK33_ARATH5.065e-1734.07Putative cysteine-rich receptor-like protein kinas... [more]
CRK23_ARATH5.065e-1734.85Putative cysteine-rich receptor-like protein kinas... [more]
CRK16_ARATH5.065e-1733.81Putative cysteine-rich receptor-like protein kinas... [more]
APK1B_ARATH6.615e-1737.12Protein kinase APK1B, chloroplastic OS=Arabidopsis... [more]
APK1A_ARATH6.615e-1738.64Protein kinase APK1A, chloroplastic OS=Arabidopsis... [more]
NORK_PEA8.640e-1735.56Nodulation receptor kinase OS=Pisum sativum GN=NOR... [more]
NORK_MEDTR8.640e-1735.56Nodulation receptor kinase OS=Medicago truncatula ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001O06_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001O06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185801 ID=CN185801; Name=CN185801; organism=Citrus sinensis; type=EST; length=741bp
TTTTTTTATCAATTTTCTTTATAAATTGATTTGATACACGGGGTTTTCCA
GTGTATGTCCGGGTTCTGAAAATTCATCCGGATACCGCATTTATGTACAT
TATTTAAAATATATAACGAATTCTCACTATCAAAAAAAAAAAAAAAGAAT
TCTCATCATTTACCCTCAGTCCTAGTCTCCTGCACTAATATTTCTTTTGC
TCTCTCATTCTCCTTTGAATTTTTCTTAAATATGTACAAAAAGCAGGGGT
GATAAATTCGTTTTCATTTTGGTGCGCTCTTAAGCTCTTCACGGAGAGTT
TTTCGTAACAGTGGTGACCGACATTTTGTCATGTACTTCAAGCAGCAAAG
ATTGCCCCTGAGTAGCTGTACCACCTGACTCATTTGGGGCCGTCGAATTG
AAGACTGTTGTATACACAGCGAAGCCGCCAATAGTACCAGATTCATCTGC
CGGGTATCGTACTCATCTGCTAGGGAGGCATCAACTAGCTCTCTAATTTC
ATTCCTCTTTATCATAGGCCTTGCCCATAATACAAGGCTTTGCTGAGAGT
AATCAAGAGCTCGGCGTCCTGTGACCAATTCCAGTAGTAATACACCGAAG
GCAAAGACGTCGGTCTTTTCATCTACTATCCCATGCATTAAGAACTCAGG
AGCAAGATAGCCAAACGTGCCTTCAACTTTTGATATTGTGTGATGAGTCC
ATTGCTCANGTAGCCATTTCGCTAGTCCAAAATCACAAATC
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