CN185797

Overview
NameCN185797
Unique NameCN185797
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length614
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185797 vs. ExPASy Swiss-Prot
Match: DNJA1_HUMAN (DnaJ homolog subfamily A member 1 OS=Homo sapiens GN=DNAJA1 PE=1 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 4.639e-25
Identity = 58/132 (43.94%), Postives = 86/132 (65.15%), Query Frame = -2
Query:  224 EHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSLDFPES--LSPDQCKMLESVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRR 613
            +H  F R+G+DLF+   + L EALCGFQ  I+ LD R ++I S PG++VK    K + +EGMP+Y+RP+ +G+L I F ++FPE+  LSPD+  +LE +LP R  V+    E DE ++  L D +  +E RR
Sbjct:  247 DHAVFTRRGEDLFMCMDIQLVEALCGFQKPISTLDNRTIVITSHPGQIVKHGDIKCVLNEGMPIYRRPYEKGRLIIEFKVNFPENGFLSPDKLSLLEKLLPERKEVE----ETDEMDQVELVDFDPNQERRR 374          
BLAST of CN185797 vs. ExPASy Swiss-Prot
Match: DNJA1_BOVIN (DnaJ homolog subfamily A member 1 OS=Bos taurus GN=DNAJA1 PE=2 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 4.639e-25
Identity = 58/132 (43.94%), Postives = 86/132 (65.15%), Query Frame = -2
Query:  224 EHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSLDFPES--LSPDQCKMLESVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRR 613
            +H  F R+G+DLF+   + L EALCGFQ  I+ LD R ++I S PG++VK    K + +EGMP+Y+RP+ +G+L I F ++FPE+  LSPD+  +LE +LP R  V+    E DE ++  L D +  +E RR
Sbjct:  247 DHAVFTRRGEDLFMCMDIQLVEALCGFQKPISTLDNRTIVITSHPGQIVKHGDIKCVLNEGMPIYRRPYEKGRLIIEFKVNFPENGFLSPDKLSLLEKLLPERKEVE----ETDEMDQVELVDFDPNQERRR 374          
BLAST of CN185797 vs. ExPASy Swiss-Prot
Match: DNJA2_HUMAN (DnaJ homolog subfamily A member 2 OS=Homo sapiens GN=DNAJA2 PE=1 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.033e-24
Identity = 54/124 (43.55%), Postives = 79/124 (63.71%), Query Frame = -2
Query:  263 EHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSLDFPES--LSPDQCKMLESVLPPRTSV-----QLTDMELDECEET 613
            EH  F+R G+DL + + + L EALCGFQF   HLDGRQ+++K  PG+V++P   + +  EGMP Y+ PF +G LYI F + FPE+  ++PD+   LE +LP R  V     +  ++EL E + T
Sbjct:  256 EHEVFQRDGNDLHMTYKIGLVEALCGFQFTFKHLDGRQIVVKYPPGKVIEPGCVRVVRGEGMPQYRNPFEKGDLYIKFDVQFPENNWINPDKLSELEDLLPSRPEVPNIIGETEEVELQEFDST 379          
BLAST of CN185797 vs. ExPASy Swiss-Prot
Match: DNJA2_BOVIN (DnaJ homolog subfamily A member 2 OS=Bos taurus GN=DNAJA2 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 1.763e-24
Identity = 54/124 (43.55%), Postives = 78/124 (62.90%), Query Frame = -2
Query:  263 EHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSLDFPES--LSPDQCKMLESVLPPRTSV-----QLTDMELDECEET 613
            EH  F+R G+DL + + + L EALCGFQF   HLDGRQ+++K  PG+V++P   + +  EGMP Y+ PF +G LYI F + FPE+  ++PD+   LE +LP R  V        ++EL E + T
Sbjct:  256 EHEVFQRDGNDLHMTYKIGLVEALCGFQFTFKHLDGRQIVVKYPPGKVIEPGCVRVVRGEGMPQYRNPFEKGDLYIKFDVQFPENNWINPDKLSELEDLLPSRPEVPNIIGDTEEVELQEFDST 379          
BLAST of CN185797 vs. ExPASy Swiss-Prot
Match: DNJA2_RAT (DnaJ homolog subfamily A member 2 OS=Rattus norvegicus GN=Dnaja2 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 5.129e-24
Identity = 53/124 (42.74%), Postives = 78/124 (62.90%), Query Frame = -2
Query:  263 EHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSLDFPES--LSPDQCKMLESVLPPRTSV-----QLTDMELDECEET 613
            EH  F+R G+DL + + + L EALCGFQF   HLD RQ+++K  PG+V++P   + +  EGMP Y+ PF +G LYI F + FPE+  ++PD+   LE +LP R  V     +  ++EL E + T
Sbjct:  256 EHEVFQRDGNDLHMTYKIGLVEALCGFQFTFKHLDARQIVVKYPPGKVIEPGCVRVVRGEGMPQYRNPFEKGDLYIKFDVQFPENNWINPDKLSELEDLLPSRPEVPNVIGETEEVELQEFDST 379          
BLAST of CN185797 vs. ExPASy Swiss-Prot
Match: DNJA2_MOUSE (DnaJ homolog subfamily A member 2 OS=Mus musculus GN=Dnaja2 PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 5.129e-24
Identity = 53/124 (42.74%), Postives = 78/124 (62.90%), Query Frame = -2
Query:  263 EHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSLDFPES--LSPDQCKMLESVLPPRTSV-----QLTDMELDECEET 613
            EH  F+R G+DL + + + L EALCGFQF   HLD RQ+++K  PG+V++P   + +  EGMP Y+ PF +G LYI F + FPE+  ++PD+   LE +LP R  V     +  ++EL E + T
Sbjct:  256 EHEVFQRDGNDLHMTYKIGLVEALCGFQFTFKHLDARQIVVKYPPGKVIEPGCVRVVRGEGMPQYRNPFEKGDLYIKFDVQFPENNWINPDKLSELEDLLPSRPEVPNVIGETEEVELQEFDST 379          
BLAST of CN185797 vs. ExPASy Swiss-Prot
Match: DNJA4_MOUSE (DnaJ homolog subfamily A member 4 OS=Mus musculus GN=Dnaja4 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 5.307e-21
Identity = 55/133 (41.35%), Postives = 84/133 (63.16%), Query Frame = -2
Query:  221 EHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSLDFPES--LSPDQCKMLESVLPPRTSVQLTDMELDECEETTLHDVNIEEEMRRK 613
            +H  F+R+G DL ++  + L+EALCGF+  I  LD R L+I S+ GEV+K    K I +EGMP+Y+ P  +G + I F + FPE   LS ++   LE++LPPR  V++TD ++D+ E   L + N  E+  R+
Sbjct:  248 DHSVFQRRGQDLIMKMKIQLSEALCGFKKTIKTLDDRVLVISSKSGEVIKHGDLKCIRNEGMPIYKAPLEKGVMIIQFLVVFPEKQWLSQEKLPQLEALLPPRQKVRITD-DMDQVE---LKEFNPNEQSWRQ 376          
BLAST of CN185797 vs. ExPASy Swiss-Prot
Match: DNJA4_HUMAN (DnaJ homolog subfamily A member 4 OS=Homo sapiens GN=DNAJA4 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.544e-20
Identity = 51/117 (43.59%), Postives = 77/117 (65.81%), Query Frame = -2
Query:  269 EHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSLDFPES--LSPDQCKMLESVLPPRTSVQLTDMELDECE 613
            +H  F+R+G DL ++  + L+EALCGF+  I  LD R L+I S+ GEV+K    + + DEGMP+Y+ P  +G L I F + FPE   LS ++   LE++LPPR  V++TD ++D+ E
Sbjct:  248 DHSVFQRRGHDLIMKMKIQLSEALCGFKKTIKTLDNRILVITSKAGEVIKHGDLRCVRDEGMPIYKAPLEKGILIIQFLVIFPEKHWLSLEKLPQLEALLPPRQKVRITD-DMDQVE 363          
BLAST of CN185797 vs. ExPASy Swiss-Prot
Match: MAS5_SCHPO (Mitochondrial protein import protein mas5 OS=Schizosaccharomyces pombe GN=SPBC1734.11 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.107e-18
Identity = 49/103 (47.57%), Postives = 63/103 (61.17%), Query Frame = -2
Query:  311 EHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSLDFPES--LSPDQCKMLESVLPPR 613
            EHP+FKR GD LF E  + L  AL G Q V+ HLD R L I   PGE ++P++ K +  +GM + QR    G LYI F +DFPE    +P+Q  +LE  LPPR
Sbjct:  249 EHPRFKRSGDHLFYEAHVDLLTALAGGQIVVEHLDDRWLTIPIIPGECIRPNELKVLPGQGM-LSQRHHQPGNLYIRFHVDFPEPNFATPEQLALLEKALPPR 350          
BLAST of CN185797 vs. ExPASy Swiss-Prot
Match: DNJA1_DICDI (DnaJ homolog subfamily A member 1 homolog OS=Dictyostelium discoideum GN=dnaja1 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 6.948e-13
Identity = 38/119 (31.93%), Postives = 66/119 (55.46%), Query Frame = -2
Query:  245 FKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSLDFPESLSPDQCKMLESVLPPRTSVQLTDMELDECEETTLHDVN 601
            FKR GD+L     L L +++ G QF+I  LD R+L +  + G+++K    + I +EGMP+ +    +GKL I F +++P +L+ D  + L  +LP   +  ++     +C+   L  VN
Sbjct:  289 FKRNGDNLIYTKRLKLLDSIAGSQFIINTLDQRKLWVNHEKGDIIKQGDMRYIENEGMPI-KGTSRKGKLIIAFDIEYPSNLTNDDIEKLSKILPKAATPSVSK---SDCKSVGLSKVN 403          
The following BLAST results are available for this feature:
BLAST of CN185797 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 28
Match NameE-valueIdentityDescription
DNJA1_HUMAN4.639e-2543.94DnaJ homolog subfamily A member 1 OS=Homo sapiens ... [more]
DNJA1_BOVIN4.639e-2543.94DnaJ homolog subfamily A member 1 OS=Bos taurus GN... [more]
DNJA2_HUMAN1.033e-2443.55DnaJ homolog subfamily A member 2 OS=Homo sapiens ... [more]
DNJA2_BOVIN1.763e-2443.55DnaJ homolog subfamily A member 2 OS=Bos taurus GN... [more]
DNJA2_RAT5.129e-2442.74DnaJ homolog subfamily A member 2 OS=Rattus norveg... [more]
DNJA2_MOUSE5.129e-2442.74DnaJ homolog subfamily A member 2 OS=Mus musculus ... [more]
DNJA4_MOUSE5.307e-2141.35DnaJ homolog subfamily A member 4 OS=Mus musculus ... [more]
DNJA4_HUMAN1.544e-2043.59DnaJ homolog subfamily A member 4 OS=Homo sapiens ... [more]
MAS5_SCHPO1.107e-1847.57Mitochondrial protein import protein mas5 OS=Schiz... [more]
DNJA1_DICDI6.948e-1331.93DnaJ homolog subfamily A member 1 homolog OS=Dicty... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001O04_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001O04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185797 ID=CN185797; Name=CN185797; organism=Citrus sinensis; type=EST; length=614bp
ATCAGACCCCCTTTAACTACAGACAGACAAACCAAAACTAGAACCTCTAC
GGTCTATAACAGAAAATAAATATGTTGAGAATCTTTTTCTCCCAAACAAT
GAAAATACTAAATCAGGCCACCCCTTTTCTTCTACATCATCACTGCTGAG
CACACTGCGCTCTGTGGGCGCCACCTTGCATATCGTCATCTTCATCGTAT
GCCTCCTGAGCTGCTTGTTGCTTCCTTCGCATTTCCTCCTCAATGTTCAC
ATCATGCAGGGTTGTTTCTTCACACTCATCCAGTTCCATATCGGTGAGCT
GGACTGAGGTCCTTGGAGGTAGTACGGACTCCAGCATCTTGCACTGGTCT
GGGCTCAGTGACTCAGGGAAGTCAAGACTGAAATGAATGTACAGTTTGCC
CCTCATAAATGGCCTCTGATACATAGGCATTCCTTCATCATTTATGGCCT
TGAATTGGTCCGGCTTGACTACTTCCCCAGGCTGGGATTTGATGAGGAGT
TGCCGGCCATCCAAATGAGTTATTACAAATTGAAAGCCACAGAGAGCTTC
TGTCAGTGACAGGGTGTGCTCAACAAATAGGTCATCACCCTTTCGCTTAA
ATTTCGGGTGCTCT
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