CN185797

Overview
NameCN185797
Unique NameCN185797
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length614
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185797 vs. ExPASy Swiss-Prot
Match: MAS5_YEAST (Mitochondrial protein import protein MAS5 OS=Saccharomyces cerevisiae GN=YDJ1 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.185e-12
Identity = 44/116 (37.93%), Postives = 61/116 (52.59%), Query Frame = -2
Query:  272 HPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSLDFPES--LSPDQCKMLESVLPPRTSVQL-TDMELDEC 610
            H  FKR GDDL  E  + L  A+ G +F + H+ G  L +   PGEV+ P   K I  +GMP+  +    G L I F++ FPE+   S +  K LE +LPPR    +     +DEC
Sbjct:  256 HKSFKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPI-PKYGGYGNLIIKFTIKFPENHFTSEENLKKLEEILPPRIVPAIPKKATVDEC 370          
BLAST of CN185797 vs. ExPASy Swiss-Prot
Match: DNJ20_CAEEL (DnaJ homolog dnj-20 OS=Caenorhabditis elegans GN=dnj-20 PE=2 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 2.640e-12
Identity = 40/103 (38.83%), Postives = 60/103 (58.25%), Query Frame = -2
Query:  308 EHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSLDFPES-LSPDQCKMLESVLPPRT 613
            +HP+F+RKGDDL+   T+SL +AL GF+  I HLDG   ++K Q  +V  P       DEGMP  +    +G L + F ++FP++ LS +Q   +  +L   T
Sbjct:  246 KHPRFERKGDDLYTNVTISLQDALNGFEMEIQHLDGH--IVKVQRDKVTWPGARLRKKDEGMPSLEDNNKKGMLVVTFDVEFPKTELSDEQKAQIIEILQQNT 346          
BLAST of CN185797 vs. ExPASy Swiss-Prot
Match: DNJB4_PONAB (DnaJ homolog subfamily B member 4 OS=Pongo abelii GN=DNAJB4 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.003e-11
Identity = 37/99 (37.37%), Postives = 53/99 (53.54%), Query Frame = -2
Query:  317 EHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSLDFPESLSPDQCKMLESVLP 613
            +HPKFKR G ++     +SL EALCG    +  LDGR   I     ++VKP   + I   G+P  + P  RG L I F + FP+++S    ++L   LP
Sbjct:  239 DHPKFKRDGSNIIYTAKISLREALCGCSINVPTLDGRN--IPMSVNDIVKPGMRRRIIGYGLPFPKNPDQRGDLLIEFEVSFPDTISSSSKEVLRKHLP 335          
BLAST of CN185797 vs. ExPASy Swiss-Prot
Match: DNJB4_HUMAN (DnaJ homolog subfamily B member 4 OS=Homo sapiens GN=DNAJB4 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.003e-11
Identity = 37/99 (37.37%), Postives = 53/99 (53.54%), Query Frame = -2
Query:  317 EHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSLDFPESLSPDQCKMLESVLP 613
            +HPKFKR G ++     +SL EALCG    +  LDGR   I     ++VKP   + I   G+P  + P  RG L I F + FP+++S    ++L   LP
Sbjct:  239 DHPKFKRDGSNIIYTAKISLREALCGCSINVPTLDGRN--IPMSVNDIVKPGMRRRIIGYGLPFPKNPDQRGDLLIEFEVSFPDTISSSSKEVLRKHLP 335          
BLAST of CN185797 vs. ExPASy Swiss-Prot
Match: DNJB4_BOVIN (DnaJ homolog subfamily B member 4 OS=Bos taurus GN=DNAJB4 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.812e-11
Identity = 36/99 (36.36%), Postives = 53/99 (53.54%), Query Frame = -2
Query:  317 EHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSLDFPESLSPDQCKMLESVLP 613
            +HPKFKR G ++     +SL EALCG    +  +DGR   I     ++VKP   + I   G+P  + P  RG L I F + FP+++S    ++L   LP
Sbjct:  239 DHPKFKRDGSNIIYTAKISLREALCGCSINVPTMDGR--TIPMTINDIVKPGMRRRIIGYGLPFPKNPDQRGDLLIEFEVSFPDTISSSSKEVLRKHLP 335          
BLAST of CN185797 vs. ExPASy Swiss-Prot
Match: DJB11_PONAB (DnaJ homolog subfamily B member 11 OS=Pongo abelii GN=DNAJB11 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.979e-11
Identity = 37/105 (35.24%), Postives = 59/105 (56.19%), Query Frame = -2
Query:  299 EHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSLDFPESLSPDQCKMLESVLPPRTSVQ 613
            +HP F+R+GDDL+   T+SL E+L GF+  ITHLDG ++ I     ++ +P        EG+P +    ++G L I F +DFP+    ++ +     L  + SVQ
Sbjct:  247 KHPIFERRGDDLYTNVTISLVESLVGFEMDITHLDGHKVHISRD--KITRPGAKLWKKGEGLPNFDNNNIKGSLIITFDVDFPKEQLTEEAREGIKQLLKQGSVQ 349          
BLAST of CN185797 vs. ExPASy Swiss-Prot
Match: DJB11_HUMAN (DnaJ homolog subfamily B member 11 OS=Homo sapiens GN=DNAJB11 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.979e-11
Identity = 37/105 (35.24%), Postives = 59/105 (56.19%), Query Frame = -2
Query:  299 EHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSLDFPESLSPDQCKMLESVLPPRTSVQ 613
            +HP F+R+GDDL+   T+SL E+L GF+  ITHLDG ++ I     ++ +P        EG+P +    ++G L I F +DFP+    ++ +     L  + SVQ
Sbjct:  247 KHPIFERRGDDLYTNVTISLVESLVGFEMDITHLDGHKVHISRD--KITRPGAKLWKKGEGLPNFDNNNIKGSLIITFDVDFPKEQLTEEAREGIKQLLKQGSVQ 349          
BLAST of CN185797 vs. ExPASy Swiss-Prot
Match: DNJB4_MOUSE (DnaJ homolog subfamily B member 4 OS=Mus musculus GN=Dnajb4 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.503e-11
Identity = 36/99 (36.36%), Postives = 53/99 (53.54%), Query Frame = -2
Query:  317 EHPKFKRKGDDLFVEHTLSLTEALCGFQFVITHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIHFSLDFPESLSPDQCKMLESVLP 613
            EHPKFKR G ++     +SL EALCG    +  +DGR L +     ++VKP   + +   G+P  + P  RG L I F + FP+ +S    ++L   LP
Sbjct:  239 EHPKFKRDGSNIVYTAKISLREALCGCSLNVPTMDGRNLPMSVT--DIVKPGMRRRVIGYGLPFPKNPDQRGDLLIEFDVSFPDVISAASKEILRKHLP 335          
The following BLAST results are available for this feature:
BLAST of CN185797 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 28
Match NameE-valueIdentityDescription
MAS5_YEAST1.185e-1237.93Mitochondrial protein import protein MAS5 OS=Sacch... [more]
DNJ20_CAEEL2.640e-1238.83DnaJ homolog dnj-20 OS=Caenorhabditis elegans GN=d... [more]
DNJB4_PONAB1.003e-1137.37DnaJ homolog subfamily B member 4 OS=Pongo abelii ... [more]
DNJB4_HUMAN1.003e-1137.37DnaJ homolog subfamily B member 4 OS=Homo sapiens ... [more]
DNJB4_BOVIN3.812e-1136.36DnaJ homolog subfamily B member 4 OS=Bos taurus GN... [more]
DJB11_PONAB4.979e-1135.24DnaJ homolog subfamily B member 11 OS=Pongo abelii... [more]
DJB11_HUMAN4.979e-1135.24DnaJ homolog subfamily B member 11 OS=Homo sapiens... [more]
DNJB4_MOUSE6.503e-1136.36DnaJ homolog subfamily B member 4 OS=Mus musculus ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001O04_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001O04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185797 ID=CN185797; Name=CN185797; organism=Citrus sinensis; type=EST; length=614bp
ATCAGACCCCCTTTAACTACAGACAGACAAACCAAAACTAGAACCTCTAC
GGTCTATAACAGAAAATAAATATGTTGAGAATCTTTTTCTCCCAAACAAT
GAAAATACTAAATCAGGCCACCCCTTTTCTTCTACATCATCACTGCTGAG
CACACTGCGCTCTGTGGGCGCCACCTTGCATATCGTCATCTTCATCGTAT
GCCTCCTGAGCTGCTTGTTGCTTCCTTCGCATTTCCTCCTCAATGTTCAC
ATCATGCAGGGTTGTTTCTTCACACTCATCCAGTTCCATATCGGTGAGCT
GGACTGAGGTCCTTGGAGGTAGTACGGACTCCAGCATCTTGCACTGGTCT
GGGCTCAGTGACTCAGGGAAGTCAAGACTGAAATGAATGTACAGTTTGCC
CCTCATAAATGGCCTCTGATACATAGGCATTCCTTCATCATTTATGGCCT
TGAATTGGTCCGGCTTGACTACTTCCCCAGGCTGGGATTTGATGAGGAGT
TGCCGGCCATCCAAATGAGTTATTACAAATTGAAAGCCACAGAGAGCTTC
TGTCAGTGACAGGGTGTGCTCAACAAATAGGTCATCACCCTTTCGCTTAA
ATTTCGGGTGCTCT
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