CN185790
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Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185790 vs. ExPASy Swiss-Prot
Match: HAT3_ARATH (Homeobox-leucine zipper protein HAT3 OS=Arabidopsis thaliana GN=HAT3 PE=2 SV=2) HSP 1 Score: 123.25 bits (308), Expect = 3.245e-30 Identity = 60/88 (68.18%), Postives = 66/88 (75.00%), Query Frame = -1
Query: 424 KRQAWARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLHXXXXXXXXXXXXQPLYMHM-PAATLTMCPSCERI 684
++ A A+QLNLR RQVEVWFQNRRARTKLKQTEVDCE+LK+CCE LTDENRRL LYMHM P TLTMCPSCER+
Sbjct: 188 QKMALAKQLNLRTRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTDENRRLQKEVSELRALKLSPHLYMHMKPPTTLTMCPSCERV 275 HSP 2 Score: 29.6462 bits (65), Expect = 3.245e-30 Identity = 12/16 (75.00%), Postives = 14/16 (87.50%), Query Frame = -3
Query: 665 KQHSTLNPKQKASLGK 712
K+HSTLNPKQK +L K
Sbjct: 179 KEHSTLNPKQKMALAK 194
BLAST of CN185790 vs. ExPASy Swiss-Prot
Match: ATHB4_ARATH (Homeobox-leucine zipper protein ATHB-4 OS=Arabidopsis thaliana GN=ATHB-4 PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 1.581e-29 Identity = 59/93 (63.44%), Postives = 67/93 (72.04%), Query Frame = -1
Query: 409 KRQAWARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLHXXXXXXXXXXXXQPLYMHM-PAATLTMCPSCERIGGGIA 684
++ A A+QLNLR RQVEVWFQNRRARTKLKQTEVDCE+LK+CC+ LT+ENRRL LYMHM P TLTMCPSCER+ A
Sbjct: 189 QKLALAKQLNLRARQVEVWFQNRRARTKLKQTEVDCEYLKRCCDNLTEENRRLQKEVSELRALKLSPHLYMHMTPPTTLTMCPSCERVSSSAA 281 HSP 2 Score: 29.6462 bits (65), Expect = 1.581e-29 Identity = 12/16 (75.00%), Postives = 14/16 (87.50%), Query Frame = -3
Query: 665 KQHSTLNPKQKASLGK 712
K+HSTLNPKQK +L K
Sbjct: 180 KEHSTLNPKQKLALAK 195
BLAST of CN185790 vs. ExPASy Swiss-Prot
Match: HAT14_ARATH (Homeobox-leucine zipper protein HAT14 OS=Arabidopsis thaliana GN=HAT14 PE=2 SV=3) HSP 1 Score: 129.028 bits (323), Expect = 2.432e-29 Identity = 63/98 (64.29%), Postives = 72/98 (73.47%), Query Frame = -1
Query: 409 SILSKRQ--AWARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLHXXXXXXXXXXXXQPLYMHMPAATLTMCPSCERIGGGIA 696
S L+ +Q A A+QLNLRPRQVEVWFQNRRARTKLKQTEVDCE+LK+CCE+LT+ENRRL P YM +PA TLTMCPSCER+ A
Sbjct: 210 STLNPKQKIALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCESLTEENRRLQKEVKELRTLKTSTPFYMQLPATTLTMCPSCERVATSAA 307
BLAST of CN185790 vs. ExPASy Swiss-Prot
Match: HAT4_ARATH (Homeobox-leucine zipper protein HAT4 OS=Arabidopsis thaliana GN=HAT4 PE=1 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 1.704e-28 Identity = 57/88 (64.77%), Postives = 64/88 (72.73%), Query Frame = -1
Query: 424 KRQAWARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLHXXXXXXXXXXXXQPLYMHM-PAATLTMCPSCERI 684
++QA A+QL LR RQVEVWFQNRRARTKLKQTEVDCEFL++CCE LT+ENRRL YMHM P TLTMCPSCE +
Sbjct: 155 QKQALAKQLGLRARQVEVWFQNRRARTKLKQTEVDCEFLRRCCENLTEENRRLQKEVTELRALKLSPQFYMHMSPPTTLTMCPSCEHV 242 HSP 2 Score: 28.8758 bits (63), Expect = 1.704e-28 Identity = 12/16 (75.00%), Postives = 13/16 (81.25%), Query Frame = -3
Query: 665 KQHSTLNPKQKASLGK 712
K HSTLNPKQK +L K
Sbjct: 146 KDHSTLNPKQKQALAK 161
BLAST of CN185790 vs. ExPASy Swiss-Prot
Match: HOX1_ORYSJ (Homeobox-leucine zipper protein HOX1 OS=Oryza sativa subsp. japonica GN=HOX1 PE=1 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 4.885e-28 Identity = 63/115 (54.78%), Postives = 72/115 (62.61%), Query Frame = -1
Query: 367 KRQAWARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLH----XXXXXXXXXXXXQPLYMH----MPAATLTMCPSCERI-GGGIADGNSKGPFPMGTKP 684
++ A ARQLNL+PRQVEVWFQNRRARTKLKQTEVDCE LK+CCETLTDENRRLH P +++ P TLTMCPSCER+ N+ G P P
Sbjct: 183 QKAALARQLNLKPRQVEVWFQNRRARTKLKQTEVDCELLKRCCETLTDENRRLHRELQELRALKLATAAAAPHHLYGARVPPPTTLTMCPSCERVASAATTTRNNSGAAPARPVP 297 HSP 2 Score: 29.261 bits (64), Expect = 4.885e-28 Identity = 11/16 (68.75%), Postives = 15/16 (93.75%), Query Frame = -3
Query: 665 KQHSTLNPKQKASLGK 712
K+H+TLNPKQKA+L +
Sbjct: 174 KEHNTLNPKQKAALAR 189
BLAST of CN185790 vs. ExPASy Swiss-Prot
Match: HOX1_ORYSI (Homeobox-leucine zipper protein HOX1 OS=Oryza sativa subsp. indica GN=HOX1 PE=1 SV=2) HSP 1 Score: 116.316 bits (290), Expect = 4.885e-28 Identity = 63/115 (54.78%), Postives = 72/115 (62.61%), Query Frame = -1
Query: 367 KRQAWARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLH----XXXXXXXXXXXXQPLYMH----MPAATLTMCPSCERI-GGGIADGNSKGPFPMGTKP 684
++ A ARQLNL+PRQVEVWFQNRRARTKLKQTEVDCE LK+CCETLTDENRRLH P +++ P TLTMCPSCER+ N+ G P P
Sbjct: 183 QKAALARQLNLKPRQVEVWFQNRRARTKLKQTEVDCELLKRCCETLTDENRRLHRELQELRALKLATAAAAPHHLYGARVPPPTTLTMCPSCERVASAATTTRNNSGAAPARPVP 297 HSP 2 Score: 29.261 bits (64), Expect = 4.885e-28 Identity = 11/16 (68.75%), Postives = 15/16 (93.75%), Query Frame = -3
Query: 665 KQHSTLNPKQKASLGK 712
K+H+TLNPKQKA+L +
Sbjct: 174 KEHNTLNPKQKAALAR 189
BLAST of CN185790 vs. ExPASy Swiss-Prot
Match: HOX17_ORYSJ (Homeobox-leucine zipper protein HOX17 OS=Oryza sativa subsp. japonica GN=HOX17 PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 6.391e-28 Identity = 60/84 (71.43%), Postives = 65/84 (77.38%), Query Frame = -1
Query: 424 ARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLHXXXXXXXXXXXXQP-LYMHM-PAATLTMCPSCERI 669
A+QL LRPRQVEVWFQNRRARTKLKQTEVDCEFLK+CCETLT+ENRRL P LYM+M P TLTMCPSCER+
Sbjct: 113 AQQLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCETLTEENRRLQKEVQELRALKLVSPHLYMNMSPPTTLTMCPSCERV 196 HSP 2 Score: 25.7942 bits (55), Expect = 6.391e-28 Identity = 9/16 (56.25%), Postives = 14/16 (87.50%), Query Frame = -3
Query: 665 KQHSTLNPKQKASLGK 712
++H TLNP+QKA+L +
Sbjct: 99 REHPTLNPRQKATLAQ 114
BLAST of CN185790 vs. ExPASy Swiss-Prot
Match: HOX17_ORYSI (Homeobox-leucine zipper protein HOX17 OS=Oryza sativa subsp. indica GN=HOX17 PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 6.391e-28 Identity = 60/84 (71.43%), Postives = 65/84 (77.38%), Query Frame = -1
Query: 424 ARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLHXXXXXXXXXXXXQP-LYMHM-PAATLTMCPSCERI 669
A+QL LRPRQVEVWFQNRRARTKLKQTEVDCEFLK+CCETLT+ENRRL P LYM+M P TLTMCPSCER+
Sbjct: 113 AQQLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCETLTEENRRLQKEVQELRALKLVSPHLYMNMSPPTTLTMCPSCERV 196 HSP 2 Score: 25.7942 bits (55), Expect = 6.391e-28 Identity = 9/16 (56.25%), Postives = 14/16 (87.50%), Query Frame = -3
Query: 665 KQHSTLNPKQKASLGK 712
++H TLNP+QKA+L +
Sbjct: 99 REHPTLNPRQKATLAQ 114
BLAST of CN185790 vs. ExPASy Swiss-Prot
Match: HAT2_ARATH (Homeobox-leucine zipper protein HAT2 OS=Arabidopsis thaliana GN=HAT2 PE=2 SV=2) HSP 1 Score: 109.768 bits (273), Expect = 7.341e-26 Identity = 56/107 (52.34%), Postives = 67/107 (62.62%), Query Frame = -1
Query: 367 KRQAWARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLHXXXXXXXXXXXXQPLYMHM-PAATLTMCPSCERIGGGIADGNSKGPFPMGTKP 684
++ A A++LNL RQVEVWFQNRRARTKLKQTEVDCE+LK+C E LT+ENRRL Y M P TL MCPSCER+GG + + P+ P
Sbjct: 156 QKLALAKKLNLTARQVEVWFQNRRARTKLKQTEVDCEYLKRCVEKLTEENRRLQKEAMELRTLKLSPQFYGQMTPPTTLIMCPSCERVGGPSSSNHHHNHRPVSINP 262 HSP 2 Score: 28.4906 bits (62), Expect = 7.341e-26 Identity = 11/16 (68.75%), Postives = 14/16 (87.50%), Query Frame = -3
Query: 665 KQHSTLNPKQKASLGK 712
K+H+TLNPKQK +L K
Sbjct: 147 KEHNTLNPKQKLALAK 162
BLAST of CN185790 vs. ExPASy Swiss-Prot
Match: HAT1_ARATH (Homeobox-leucine zipper protein HAT1 OS=Arabidopsis thaliana GN=HAT1 PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 2.937e-24 Identity = 53/90 (58.89%), Postives = 61/90 (67.78%), Query Frame = -1
Query: 418 KRQAWARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLHXXXXXXXXXXXXQPLYMHM-PAATLTMCPSCERIGG 684
++ A A++L L RQVEVWFQNRRARTKLKQTEVDCE+LK+C E LT+ENRRL LY M P TL MCPSCER+ G
Sbjct: 161 QKLALAKKLGLTARQVEVWFQNRRARTKLKQTEVDCEYLKRCVEKLTEENRRLEKEAAELRALKLSPRLYGQMSPPTTLLMCPSCERVAG 250 HSP 2 Score: 28.4906 bits (62), Expect = 2.937e-24 Identity = 11/16 (68.75%), Postives = 14/16 (87.50%), Query Frame = -3
Query: 665 KQHSTLNPKQKASLGK 712
K+H+TLNPKQK +L K
Sbjct: 152 KEHNTLNPKQKLALAK 167 The following BLAST results are available for this feature:
BLAST of CN185790 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 33
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185790 ID=CN185790; Name=CN185790; organism=Citrus sinensis; type=EST; length=714bpback to top |