CN185789

Overview
NameCN185789
Unique NameCN185789
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length753
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185789 vs. ExPASy Swiss-Prot
Match: CSN5_USTMA (COP9 signalosome complex subunit 5 OS=Ustilago maydis GN=RRI1 PE=3 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 1.444e-63
Identity = 104/141 (73.76%), Postives = 123/141 (87.23%), Query Frame = 1
Query:  313 VKISALALLKMVVHARSGGTIEVMGLMQGKTDGD--AIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGY 729
            V+ISA+AL+KMV+HARSGG  E+MGLMQGK D +   + VMD+FALPVEGTETRVNAQ +AYEYMV Y   +K+ GRLEN VGWYHSHPGYGCWLSGIDV+TQ  NQQFQ+PF+A+VIDP RT+S+GKV+IGAFRT+PEGY
Sbjct:   61 VRISAVALIKMVMHARSGGIYEIMGLMQGKIDVENRTLYVMDSFALPVEGTETRVNAQNEAYEYMVQYLDHSKEVGRLENVVGWYHSHPGYGCWLSGIDVNTQRTNQQFQDPFVAIVIDPNRTISSGKVDIGAFRTFPEGY 201          

HSP 2 Score: 41.9726 bits (97), Expect = 1.444e-63
Identity = 23/63 (36.51%), Postives = 34/63 (53.97%), Query Frame = 3
Query:  126 SMDSSIAQKTWELENNIVSMETPPTNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYFKR 314
            S  +S+A+  +EL N I+     P +ST      D+IF YD  AQ      +PW  DPH+F++
Sbjct:    7 SSSASMARANFELNNAII-----PLSSTT----LDSIFAYDNEAQRAILHAQPWKTDPHFFQK 60          
BLAST of CN185789 vs. ExPASy Swiss-Prot
Match: CSN5_EMENI (COP9 signalosome complex subunit 5 OS=Emericella nidulans GN=rri1 PE=1 SV=2)

HSP 1 Score: 214.927 bits (546), Expect = 2.919e-61
Identity = 105/145 (72.41%), Postives = 123/145 (84.83%), Query Frame = 1
Query:  310 SVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDE 744
            SV+ISA+ALLKMV+HARSGG++EVMGLMQG    +  +V DAF LPVEGTETRVNAQ +A EYMV Y Q+ ++AGR+ENAVGWYHSHPGYGCWLSGIDVSTQ + QQ   PF+AVVIDP RT+SAGKV+IGAFRT+P+ Y PP E
Sbjct:   50 SVRISAVALLKMVMHARSGGSLEVMGLMQGYILPNTFVVTDAFRLPVEGTETRVNAQDEANEYMVSYLQSCREAGRMENAVGWYHSHPGYGCWLSGIDVSTQDM-QQMSGPFVAVVIDPERTISAGKVDIGAFRTFPKDYTPPKE 193          

HSP 2 Score: 41.9726 bits (97), Expect = 2.919e-61
Identity = 19/56 (33.93%), Postives = 27/56 (48.21%), Query Frame = 3
Query:  144 AQKTWELENNIVSMETPPTNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYFK 311
            AQ +WELEN +  ++             D+++ YDE         +PW  DPHYFK
Sbjct:    4 AQLSWELENAVTLIDPQ----------RDSLYRYDEETHKYLSDTRPWTKDPHYFK 49          
BLAST of CN185789 vs. ExPASy Swiss-Prot
Match: CSN5_GIBZE (COP9 signalosome complex subunit 5 OS=Gibberella zeae GN=RRI1 PE=3 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 4.962e-61
Identity = 101/141 (71.63%), Postives = 116/141 (82.27%), Query Frame = 1
Query:  313 VKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKP 735
            V+ISA AL+KM +HARSGG +EVMGLMQG T GD  IV DAF LPVEGTETRVNAQ +A EY+V+Y    +  GR EN VGWYHSHPGYGCWLSGIDV T+ + QQFQ+PFLAVVIDP RT+++GKV+IGAFRTYP  YKP
Sbjct:   52 VRISATALIKMTMHARSGGNLEVMGLMQGYTQGDTFIVTDAFRLPVEGTETRVNAQDEANEYIVEYLDLCRAQGRQENVVGWYHSHPGYGCWLSGIDVDTEAMQQQFQDPFLAVVIDPDRTINSGKVDIGAFRTYPADYKP 192          

HSP 2 Score: 40.4318 bits (93), Expect = 4.962e-61
Identity = 19/56 (33.93%), Postives = 29/56 (51.79%), Query Frame = 3
Query:  144 AQKTWELENNIVSMETPPTNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYFK 311
            A K WEL+NN+  ++             DA++ +D  AQ    +E+PW  DP +FK
Sbjct:    5 ALKAWELDNNVQLVDPK----------RDALYNFDADAQKAINKEQPWKQDPSHFK 50          
BLAST of CN185789 vs. ExPASy Swiss-Prot
Match: CSN5_ASPFU (COP9 signalosome complex subunit 5 OS=Aspergillus fumigatus GN=csn5 PE=3 SV=2)

HSP 1 Score: 210.305 bits (534), Expect = 1.100e-60
Identity = 101/145 (69.66%), Postives = 121/145 (83.45%), Query Frame = 1
Query:  310 SVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPDE 744
            S++ISA+AL+KM +HARSGG++EVMGLMQG    +  +V DAF LPVEGTETRVNAQ +A EYMV Y Q+ + AGR+ENAVGWYHSHPGYGCWLSGIDV+TQ + QQ   PF+AVVIDP RT+SAGKV+IGAFRT+P+ Y PP E
Sbjct:   50 SIRISAVALIKMTMHARSGGSLEVMGLMQGYILPETFVVTDAFRLPVEGTETRVNAQEEANEYMVSYLQSCRDAGRMENAVGWYHSHPGYGCWLSGIDVTTQDM-QQLGGPFVAVVIDPERTISAGKVDIGAFRTFPKDYTPPKE 193          

HSP 2 Score: 44.669 bits (104), Expect = 1.100e-60
Identity = 21/56 (37.50%), Postives = 28/56 (50.00%), Query Frame = 3
Query:  144 AQKTWELENNIVSMETPPTNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYFK 311
            AQ++WELEN I  ++             DA++ YDE         +PW  DPHYFK
Sbjct:    4 AQQSWELENTISLIDPQ----------RDALYRYDEETHKALSAARPWAKDPHYFK 49          
BLAST of CN185789 vs. ExPASy Swiss-Prot
Match: CSN5_YARLI (COP9 signalosome complex subunit 5 OS=Yarrowia lipolytica GN=RRI1 PE=3 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 2.035e-59
Identity = 101/143 (70.63%), Postives = 117/143 (81.82%), Query Frame = 1
Query:  310 SVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPP 738
            +V +S++AL+KM +HARSGG IEVMG+M GK   +  +VMD + LPVEGTETRVNAQ +  E+MV+Y Q  K  GR EN VGWYHSHPGYGCWLSGIDV TQ  NQQFQEPFLAVV+DP RT+SAGKVEIGAFRTYP+ YKPP
Sbjct:   55 NVLVSSIALVKMAMHARSGGAIEVMGMMTGKILPNTFVVMDCYPLPVEGTETRVNAQQEGIEFMVEYLQGLKDVGRRENIVGWYHSHPGYGCWLSGIDVDTQFQNQQFQEPFLAVVVDPNRTISAGKVEIGAFRTYPKDYKPP 197          

HSP 2 Score: 33.4982 bits (75), Expect = 2.035e-59
Identity = 16/53 (30.19%), Postives = 27/53 (50.94%), Query Frame = 3
Query:  153 TWELENNIVSMETPPTNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYFK 311
            T+++EN+IV +++ P          D ++ YD+  Q       PW  DP YF+
Sbjct:    6 TFQVENDIVDVDSTPQQGFD----RDDLYKYDDVEQKAILAAHPWRTDPSYFR 54          
BLAST of CN185789 vs. ExPASy Swiss-Prot
Match: CSN5_NEUCR (COP9 signalosome complex subunit 5 OS=Neurospora crassa GN=rri-1 PE=1 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 1.304e-58
Identity = 97/142 (68.31%), Postives = 118/142 (83.10%), Query Frame = 1
Query:  310 SVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKP 735
            +V+IS++A++KMV+HARSGG +EVMG+MQG  +G  +++ DA+ LPVEGTETRVNAQ +A EYMV+Y +  ++  RLEN +GWYHSHPGYGCWLSGIDV TQ L QQF EPF+AVVIDP RTVS  KVEIGAFRT PEG KP
Sbjct:   43 TVRISSVAMIKMVMHARSGGNLEVMGMMQGYIEGSTMVITDAYRLPVEGTETRVNAQDEANEYMVEYLRLCREENRLENVIGWYHSHPGYGCWLSGIDVGTQSLQQQFNEPFVAVVIDPDRTVSQNKVEIGAFRTIPEGIKP 184          

HSP 2 Score: 36.5798 bits (83), Expect = 1.304e-58
Identity = 17/43 (39.53%), Postives = 20/43 (46.51%), Query Frame = 3
Query:  183 METPPTNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYFK 311
            ME PP     D    DA++ YD  A       +PW ND  YFK
Sbjct:    1 MELPPNPGLVDVQR-DALYAYDSEAHKAVVNSRPWTNDHKYFK 42          
BLAST of CN185789 vs. ExPASy Swiss-Prot
Match: CSN5_CRYNE (COP9 signalosome complex subunit 5 OS=Cryptococcus neoformans GN=RRI1 PE=3 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 4.907e-58
Identity = 98/143 (68.53%), Postives = 115/143 (80.42%), Query Frame = 1
Query:  310 SVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPP 738
            +VKISA+AL+KMV HARSGG  E+MG+M GK       +MD  ALPV+GTETRVNA  +A EYMV++   N +AG+ E   GWYHSHPGYGCWLSGIDV+TQ+ NQ+F +P+LAVVIDP RTVSAGKVEIGAFRTYPEGY PP
Sbjct:   50 TVKISAVALIKMVTHARSGGIYEIMGIMYGKVRDGTFWIMDVAALPVQGTETRVNAGNEAMEYMVNFQTANAEAGKGELLRGWYHSHPGYGCWLSGIDVNTQLNNQKFNDPYLAVVIDPNRTVSAGKVEIGAFRTYPEGYTPP 192          

HSP 2 Score: 38.891 bits (89), Expect = 4.907e-58
Identity = 22/58 (37.93%), Postives = 28/58 (48.28%), Query Frame = 3
Query:  135 SSIAQKTWELENNIVSMETPPTNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYF 308
            +S A+KT+E+ NN+            D SA  AIF Y    +     E PW  DPHYF
Sbjct:    2 ASTARKTFEINNNV---------QVVDPSA--AIFQYSREEEKLLDDEAPWRTDPHYF 48          
BLAST of CN185789 vs. ExPASy Swiss-Prot
Match: CSN5_DEBHA (COP9 signalosome complex subunit 5 OS=Debaryomyces hansenii GN=RRI1 PE=3 SV=2)

HSP 1 Score: 216.083 bits (549), Expect = 9.854e-56
Identity = 101/141 (71.63%), Postives = 117/141 (82.98%), Query Frame = 1
Query:  319 ISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEGYKPPD 741
            IS+LAL KM VHA+SGG IEVMG+M GK   ++IIVMD + LPVEGTETRVNAQA+ YEYMV Y + +KQ GR EN VGWYHSHPGYGCWLSGIDV+TQ LNQ FQ+P+LA+VIDP +T   GKVEIGAFRT+P+ YK PD
Sbjct:   65 ISSLALCKMSVHAKSGGAIEVMGMMTGKIIKNSIIVMDVYPLPVEGTETRVNAQAEGYEYMVQYLENSKQVGRDENIVGWYHSHPGYGCWLSGIDVATQSLNQNFQDPYLAIVIDPMKTEDQGKVEIGAFRTFPDNYKSPD 205          

HSP 2 Score: 22.3274 bits (46), Expect = 9.854e-56
Identity = 9/42 (21.43%), Postives = 19/42 (45.24%), Query Frame = 3
Query:  189 TPPTNSTADTSASDAIFFYDEGAQTKFQQEKPWVNDPHYFKR 314
            T   ++T     +D   F+   +     + +PW ++  YFK+
Sbjct:   21 TQSLDATEIDKHADYESFFSINSDESIMKARPWKSNAKYFKK 62          
BLAST of CN185789 vs. ExPASy Swiss-Prot
Match: CSN5_SCHPO (COP9 signalosome complex subunit 5 OS=Schizosaccharomyces pombe GN=csn5 PE=1 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 4.257e-47
Identity = 85/139 (61.15%), Postives = 106/139 (76.26%), Query Frame = 1
Query:  310 SVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEG 726
            SVKISA+ALLKM+ H   G  +EVMG +QGK +G ++I++D+FALPVEGTETRVNA  +A EY V Y    K   R EN +GWYHSHP YGCWLSG+DV TQ  NQ++Q+PF+AVV+DP R++ +  V IGAFRTYP G
Sbjct:   34 SVKISAVALLKMLRHVSQGMPLEVMGYVQGKVEGASLIILDSFALPVEGTETRVNAHEEAQEYSVQYHTLCKSVYRHENVIGWYHSHPNYGCWLSGVDVETQRQNQKYQDPFVAVVLDPKRSLESPYVNIGAFRTYPVG 172          

HSP 2 Score: 26.9498 bits (58), Expect = 4.257e-47
Identity = 9/26 (34.62%), Postives = 16/26 (61.54%), Query Frame = 3
Query:  234 IFFYDEGAQTKFQQEKPWVNDPHYFK 311
            +F +DE  +    +E PW +DP +F+
Sbjct:    8 VFRFDEEKERAKIRESPWKHDPEFFR 33          
BLAST of CN185789 vs. ExPASy Swiss-Prot
Match: CSN5_CANAL (COP9 signalosome complex subunit 5 OS=Candida albicans GN=RRI1 PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 5.045e-44
Identity = 84/134 (62.69%), Postives = 103/134 (76.87%), Query Frame = 1
Query:  319 ISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGR---LENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFR 711
            IS+LAL+KM  HA++GG+IE+MG++ GK  G +IIVMD + LPVEGTETRVNAQ +AY YMV+Y    +Q       EN VGWYH HP YGCWL GIDVSTQ LNQ  Q+P+LA+V+DP +T+  GKVEIGAFR
Sbjct:   77 ISSLALMKMCTHAQTGGSIEIMGMLVGKISGHSIIVMDTYRLPVEGTETRVNAQNEAYTYMVEYLTERQQLSNGKNEENIVGWYHRHPRYGCWLKGIDVSTQSLNQGLQDPYLAIVVDPVKTLKQGKVEIGAFR 210          
The following BLAST results are available for this feature:
BLAST of CN185789 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
CSN5_USTMA1.444e-6373.76COP9 signalosome complex subunit 5 OS=Ustilago may... [more]
CSN5_EMENI2.919e-6172.41COP9 signalosome complex subunit 5 OS=Emericella n... [more]
CSN5_GIBZE4.962e-6171.63COP9 signalosome complex subunit 5 OS=Gibberella z... [more]
CSN5_ASPFU1.100e-6069.66COP9 signalosome complex subunit 5 OS=Aspergillus ... [more]
CSN5_YARLI2.035e-5970.63COP9 signalosome complex subunit 5 OS=Yarrowia lip... [more]
CSN5_NEUCR1.304e-5868.31COP9 signalosome complex subunit 5 OS=Neurospora c... [more]
CSN5_CRYNE4.907e-5868.53COP9 signalosome complex subunit 5 OS=Cryptococcus... [more]
CSN5_DEBHA9.854e-5671.63COP9 signalosome complex subunit 5 OS=Debaryomyces... [more]
CSN5_SCHPO4.257e-4761.15COP9 signalosome complex subunit 5 OS=Schizosaccha... [more]
CSN5_CANAL5.045e-4462.69COP9 signalosome complex subunit 5 OS=Candida albi... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001N23_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001N23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185789 ID=CN185789; Name=CN185789; organism=Citrus sinensis; type=EST; length=753bp
GAGGTTAGAATATATATATATATATATAGAAATTAGAATTGTTGTTGGTG
TTGTTGGTGTTCGTCTTGTTTGTTGTTCCAGACAGTGTAGGGTGTAGGCA
GAGAGGGAGAGAAAACAACATAGTATCGATGGACTCGTCAATAGCGCAAA
AGACATGGGAACTGGAAAACAACATAGTATCGATGGAGACACCGCCGACA
AACTCAACAGCCGACACGTCAGCATCGGACGCGATTTTCTTCTACGACGA
AGGGGCGCAGACCAAGTTCCAGCAAGAGAAGCCCTGGGTCAATGACCCTC
ACTACTTCAAGCGTGAAGATCTCCGCACTCGCCCTCCTCAAGATGGTCGT
CCATGCGCGATCCGGTGGGACCATCGAGGTCATGGGCCTTATGCAAGGCA
AAACCGACGGCGACGCCATCATTGTCATGGACGCCTTTGCTTTGCCCGTT
GAAGGTACCGAAACCAGGGTTAATGCTCAGGCCGATGCTTATGAATATAT
GGTCGATTATTCCCAAACCAACAAACAGGCCGGACGTCTGGAGAATGCTG
TTGGGTGGTACCATTCACATCCTGGCTATGGATGCTGGCTTTCGGGTATT
GATGTTTCAACTCAAATGCTTAATCAGCAGTTTCAGGAGCCATTTTTGGC
TGTTGTGATTGATCCTACTAGGACTGTTTCTGCTGGGAAAGTTGAGATTG
GAGCTTTCAGGACGTATCCTGAAGGATACAAGCCTCCGGATGAACCCATC
TCT
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