CN185789
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185789 vs. ExPASy Swiss-Prot
Match: PSDE_HUMAN (26S proteasome non-ATPase regulatory subunit 14 OS=Homo sapiens GN=PSMD14 PE=1 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 3.285e-27 Identity = 69/139 (49.64%), Postives = 89/139 (64.03%), Query Frame = 1 Query: 301 TTSSVKISALALLKMVVHARSGGTIEVMGLMQGK-TDGDAIIVMDAFALPVEGTETRVNAQADAYEY-MVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFR 711 T V IS+LALLKM+ H R+G +EVMGLM G+ D + V+D FA+P GT V A ++ M+D KQ GR E VGWYHSHPG+GCWLSG+D++TQ + E +AVV+DP ++V GKV I AFR Sbjct: 27 TAEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQSGTGVSVEAVDPVFQAKMLDML---KQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPIQSVK-GKVVIDAFR 161
BLAST of CN185789 vs. ExPASy Swiss-Prot
Match: PSDE_ARATH (26S proteasome non-ATPase regulatory subunit 14 OS=Arabidopsis thaliana GN=RPN11 PE=2 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 3.285e-27 Identity = 66/139 (47.48%), Postives = 91/139 (65.47%), Query Frame = 1 Query: 301 TTSSVKISALALLKMVVHARSGGTIEVMGLMQGK-TDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRT 714 T+ V IS+LALLKM+ H R+G +EVMGLM G+ D + V+D FA+P GT V+ +A + + + KQ GR E VGWYHSHPG+GCWLSG+D++TQ + + +AVV+DP ++V GKV I AFR+ Sbjct: 26 TSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVVDVFAMPQSGTG--VSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQSVK-GKVVIDAFRS 161
BLAST of CN185789 vs. ExPASy Swiss-Prot
Match: PSDE_DROME (26S proteasome non-ATPase regulatory subunit 14 OS=Drosophila melanogaster GN=Rpn11 PE=1 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 4.290e-27 Identity = 69/139 (49.64%), Postives = 89/139 (64.03%), Query Frame = 1 Query: 301 TTSSVKISALALLKMVVHARSGGTIEVMGLMQGK-TDGDAIIVMDAFALPVEGTETRVNAQADAYEY-MVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFR 711 T V IS+LALLKM+ H R+G +EVMGLM G+ D + V+D FA+P GT V A ++ M+D KQ GR E VGWYHSHPG+GCWLSG+D++TQ + E +AVV+DP ++V GKV I AFR Sbjct: 25 TAEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVQVIDVFAMPQTGTGVSVEAVDPVFQAKMLDML---KQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPIQSVK-GKVVIDAFR 159
BLAST of CN185789 vs. ExPASy Swiss-Prot
Match: RPN11_YEAST (26S proteasome regulatory subunit RPN11 OS=Saccharomyces cerevisiae GN=RPN11 PE=1 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 5.604e-27 Identity = 69/144 (47.92%), Postives = 91/144 (63.19%), Query Frame = 1 Query: 301 TTSSVKISALALLKMVVHARSGGTIEVMGLMQGK-TDGDAIIVMDAFALPVEGTETRVNAQADAYEY-MVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEG 726 T +V IS++ALLKM+ H R+G +EVMGLM G+ D + V+D FA+P GT V A D ++ M+D KQ GR + VGWYHSHPG+GCWLS +DV+TQ +Q +AVV+DP ++V GKV I AFR G Sbjct: 23 TKETVYISSIALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVNVVDVFAMPQSGTGVSVEAVDDVFQAKMMDML---KQTGRDQMVVGWYHSHPGFGCWLSSVDVNTQKSFEQLNSRAVAVVVDPIQSVK-GKVVIDAFRLIDTG 162
BLAST of CN185789 vs. ExPASy Swiss-Prot
Match: RPN11_CANGA (26S proteasome regulatory subunit RPN11 OS=Candida glabrata GN=RPN11 PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 7.318e-27 Identity = 69/144 (47.92%), Postives = 91/144 (63.19%), Query Frame = 1 Query: 301 TTSSVKISALALLKMVVHARSGGTIEVMGLMQGK-TDGDAIIVMDAFALPVEGTETRVNAQADAYEY-MVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFRTYPEG 726 T +V IS++ALLKM+ H R+G +EVMGLM G+ D + V+D FA+P GT V A D ++ M+D KQ GR + VGWYHSHPG+GCWLS +DV+TQ +Q +AVV+DP ++V GKV I AFR G Sbjct: 23 TKETVYISSIALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVNVVDVFAMPQSGTGVSVEAVDDVFQARMMDML---KQTGRDQMVVGWYHSHPGFGCWLSSVDVNTQKSFEQLNNRAVAVVVDPIQSVK-GKVVIDAFRLIDTG 162
BLAST of CN185789 vs. ExPASy Swiss-Prot
Match: RPN11_ASHGO (26S proteasome regulatory subunit RPN11 OS=Ashbya gossypii GN=RPN11 PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.248e-26 Identity = 69/139 (49.64%), Postives = 89/139 (64.03%), Query Frame = 1 Query: 301 TTSSVKISALALLKMVVHARSGGTIEVMGLMQGK-TDGDAIIVMDAFALPVEGTETRVNAQADAYEY-MVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFR 711 T +V IS+LALLKM+ H+R+G +EVMGLM G D + V+D FA+P GT V A D ++ M+D KQ GR + VGWYHSHPG+GCWLS +DV TQ +Q +AVV+DP ++V GKV I AFR Sbjct: 28 TKETVYISSLALLKMLKHSRAGVPMEVMGLMLGDFVDEYTVNVVDVFAMPQSGTGVSVEAVDDVFQAKMMDML---KQTGRDQMVVGWYHSHPGFGCWLSSVDVDTQRSFEQLNSRAVAVVVDPIQSVK-GKVVIDAFR 162
BLAST of CN185789 vs. ExPASy Swiss-Prot
Match: RPN11_SCHPO (26S proteasome regulatory subunit rpn11 OS=Schizosaccharomyces pombe GN=rpn11 PE=1 SV=2) HSP 1 Score: 116.701 bits (291), Expect = 1.380e-25 Identity = 67/135 (49.63%), Postives = 86/135 (63.70%), Query Frame = 1 Query: 313 VKISALALLKMVVHARSGGTIEVMGLMQGK-TDGDAIIVMDAFALPVEGTETRVNAQADAYEY-MVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFR 711 V IS+LALLKM+ H R G +EVMGLM G+ D + V+D FA+P GT V A ++ M+D KQ GR E VGWYHSHPG+GCWLS +D++TQ +Q +AVV+DP ++V GKV I AFR Sbjct: 30 VYISSLALLKMLRHGRHGTPMEVMGLMLGEFVDDFTVRVVDVFAMPQSGTGVSVEAVDPVFQKNMMDML---KQTGRPEMVVGWYHSHPGFGCWLSSVDINTQQSFEQLTPRAVAVVVDPIQSVK-GKVVIDAFR 160
BLAST of CN185789 vs. ExPASy Swiss-Prot
Match: RPN11_ENCCU (26S proteasome regulatory subunit RPN11 OS=Encephalitozoon cuniculi GN=RPN11 PE=1 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.380e-25 Identity = 63/137 (45.99%), Postives = 89/137 (64.96%), Query Frame = 1 Query: 304 TSSVKISALALLKMVVHARSGGTIEVMGLMQGK-TDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENAVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVEIGAFR 711 + +V+IS+LALLKM+ H R+G +EVMGLM G+ D + V+D FA+P GT V + ++ ++ K GR E VGWYHSHPG+GCWLS +D+STQ ++ + +AVV+DP ++V GKV I AFR Sbjct: 18 SETVQISSLALLKMLKHGRAGIPLEVMGLMLGEFVDEYTVKVVDVFAMPQSGTNVTVESVDPIFQ--MEMMSILKATGRHETVVGWYHSHPGFGCWLSTVDISTQQSFEKLCKRAVAVVVDPIQSVK-GKVVIDAFR 151 The following BLAST results are available for this feature:
BLAST of CN185789 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN185789 ID=CN185789; Name=CN185789; organism=Citrus sinensis; type=EST; length=753bpback to top |