CN185769

Overview
NameCN185769
Unique NameCN185769
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length732
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185769 vs. ExPASy Swiss-Prot
Match: DHSO2_YEAST (Sorbitol dehydrogenase 2 OS=Saccharomyces cerevisiae GN=SOR2 PE=1 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.368e-27
Identity = 71/201 (35.32%), Postives = 116/201 (57.71%), Query Frame = -3
Query:  146 LRFGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS----TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAAREVDVVGVFRYK-NTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETS-ARGGTAIKVM 730
            L  G+H+ + A +   T V++ GAGP+GL+T   ARAFGA  ++ VDV D +L  AK+ GA N    S       QD+A+ V+K+    G   DV F+C+G +  +  A+  T+ GG +  VGMG +    P+   + +E+ ++G FRY    +   +  + +GK++VKPLITH+F F  ++  +A++ + A GG  +K +
Sbjct:  156 LSVGVHSNKLAGVRFGTKVVVFGAGPVGLLTGAVARAFGATDVIFVDVFDNKLQRAKDFGATNTFNSSQFSTDKAQDLADGVQKL--LGGNHADVVFECSGADVCIDAAVKTTKVGGTMVQVGMGKNYTNFPIAEVSGKEMKLIGCFRYSFGDYRDAVNLVATGKVNVKPLITHKFKF--EDAAKAYDYNIAHGGEVVKTI 352          
BLAST of CN185769 vs. ExPASy Swiss-Prot
Match: DHSO1_YEAST (Sorbitol dehydrogenase 1 OS=Saccharomyces cerevisiae GN=SOR1 PE=1 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.368e-27
Identity = 71/201 (35.32%), Postives = 116/201 (57.71%), Query Frame = -3
Query:  146 LRFGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS----TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAAREVDVVGVFRYK-NTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETS-ARGGTAIKVM 730
            L  G+H+ + A +   T V++ GAGP+GL+T   ARAFGA  ++ VDV D +L  AK+ GA N    S       QD+A+ V+K+    G   DV F+C+G +  +  A+  T+ GG +  VGMG +    P+   + +E+ ++G FRY    +   +  + +GK++VKPLITH+F F  ++  +A++ + A GG  +K +
Sbjct:  156 LSVGVHSNKLAGVRFGTKVVVFGAGPVGLLTGAVARAFGATDVIFVDVFDNKLQRAKDFGATNTFNSSQFSTDKAQDLADGVQKL--LGGNHADVVFECSGADVCIDAAVKTTKVGGTMVQVGMGKNYTNFPIAEVSGKEMKLIGCFRYSFGDYRDAVNLVATGKVNVKPLITHKFKF--EDAAKAYDYNIAHGGEVVKTI 352          
BLAST of CN185769 vs. ExPASy Swiss-Prot
Match: YDJJ_ECOLI (Uncharacterized zinc-type alcohol dehydrogenase-like protein ydjJ OS=Escherichia coli (strain K12) GN=ydjJ PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.756e-22
Identity = 66/187 (35.29%), Postives = 106/187 (56.68%), Query Frame = -3
Query:  176 GLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPA-----AAREVDVVGVFRYKNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETS 721
            G+HA   A++ P   ++I+GAG IGL+T+   +  GA  I +VDV + RL++A++LGA   V ++   +D     ++  + MG   D+ F+ AG   T+  A      GGK+ +VG      TVP   A       REV +  VFRY N +P+ +E + SG+ DVK ++TH + +  ++V++AFE S
Sbjct:  157 GMHAAMLADVKPGKKIIILGAGCIGLMTLQACKCLGATEIAVVDVLEKRLAMAEQLGA--TVVINGAKEDTIARCQQFTEDMGA--DIVFETAGSAVTVKQAPYLVMRGGKIMIVG------TVPGDSAINFLKINREVTIQTVFRYANRYPVTIEAISSGRFDVKSMVTHIYDY--RDVQQAFEES 331          
BLAST of CN185769 vs. ExPASy Swiss-Prot
Match: XYL2_YEAST (D-xylulose reductase OS=Saccharomyces cerevisiae GN=XYL2 PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.996e-22
Identity = 66/188 (35.11%), Postives = 102/188 (54.26%), Query Frame = -3
Query:  173 LRFGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMG-TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAAREVDVVGVFRY-KNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSA 730
            L   +HA + A I      ++ GAGPIGL+    A  FGA  +V VD+ + +L  A++ GA +IV  S +L         I+KA+G  G DV F+C+G    +   +   +AGG +  VGMG  E+  P++    +E+   G FRY +  +   +E + S K+ +KP ITHR+ F  K+  EAFE ++
Sbjct:  157 LSVAIHANKLAKIKFGARCVVFGAGPIGLLAGKVASVFGAADVVFVDLLENKLETARQFGATHIVN-SGDLPHGVTVDSVIKKAIGKKGADVVFECSGAEPCVRAGIEVCKAGGTIVQVGMGQEEIQFPISIIPTKELTFQGCFRYCQGDYSDSIELVSSRKLSLKPFITHRYSF--KDAVEAFEETS 341          
BLAST of CN185769 vs. ExPASy Swiss-Prot
Match: TDH_BURP8 (L-threonine 3-dehydrogenase OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=tdh PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.066e-19
Identity = 58/174 (33.33%), Postives = 97/174 (55.75%), Query Frame = -3
Query:  167 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAAREVDVVGVFRYK--NTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARG 679
            +VLI GAGPIG++ +  A+  GA  +VI DV+DYRL +A+++GA   V VS   L+D+  ++      M  G DV  + +G     ++ L A   GGK+ L+G+   +  +  T    + +++ G++  +   TW   +  L+SG +D+ P++THRF     + E+AF T   G
Sbjct:  166 DVLITGAGPIGIMAVAIAKHVGARNVVITDVNDYRLELARKMGATRAVNVSRETLRDVMRDLH-----MTEGFDVGLEMSGVPSAFTSMLEAMNHGGKIALLGIPPAQTAIDWTQVIFKGLEIKGIYGREMFETWYKMVAMLQSG-LDLSPILTHRFAVD--DYEKAFATMLSG 331          
BLAST of CN185769 vs. ExPASy Swiss-Prot
Match: XYLD_RHILO (Putative D-xylulose reductase OS=Rhizobium loti GN=mlr4915 PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.818e-19
Identity = 59/185 (31.89%), Postives = 97/185 (52.43%), Query Frame = -3
Query:  167 GLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAAREVDVVGVFRYKNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARG 721
            G+ A  RA I P    +++G GPIG++  L A A G  +++I D    +L +A +     IV V+   + + + V       G   D+ F+ +G  K  +      R GG V LVG+    + + +  A ++EV +  VFRY N +   L+ + SGK+D+KPLIT  + F+  +  +AFE +A+G
Sbjct:  154 GMQAASRARIVPGDVAVVVGCGPIGIMIALAALAGGCSKVLISDFSAPKLKIAAQYAG--IVPVNIGERSLVDAVAAATDKWGA--DIVFEASGSPKAFADLFDVVRPGGAVVLVGLPVEPVALNVPAAISKEVRIETVFRYANIFDRALQLIASGKVDLKPLITGTYDFA--DSIKAFERAAQG 332          
BLAST of CN185769 vs. ExPASy Swiss-Prot
Match: TDH_FRAP2 (L-threonine 3-dehydrogenase OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=tdh PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.100e-19
Identity = 63/190 (33.16%), Postives = 102/190 (53.68%), Query Frame = -3
Query:  167 LHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS--TNLQDIAEEVEKIQKAMG--TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAAREVDVVGVFRYK--NTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARG 718
            +H     N+  E +VLI GAGPIGL+ +  AR  GA RIVI D++ YRL +A++ GA   V VS   N Q +  ++ K+   +G   G DV  + +G N  +S  L     GGK+ L+G+   +++V       + + + G++  +   TW L    L++G +D++P+ITHR      + ++ FE    G
Sbjct:  155 IHTALSFNLTGE-DVLITGAGPIGLMAVKIARFCGARRIVITDINKYRLQMARDFGATVAVNVSEFQNQQQLTAQMRKVMSEIGMTEGFDVGLEMSGINSAISMMLDVMNHGGKLSLLGISAGDISVDWGAILFKGLTLKGIYGREMFETWYLMTSMLQAG-MDMEPIITHRLHID--DYQKGFEIMKSG 340          
BLAST of CN185769 vs. ExPASy Swiss-Prot
Match: YDJL_ECOLI (Uncharacterized zinc-type alcohol dehydrogenase-like protein ydjL OS=Escherichia coli (strain K12) GN=ydjL PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.049e-19
Identity = 65/185 (35.14%), Postives = 96/185 (51.89%), Query Frame = -3
Query:  146 PETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDD---YRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAAREVDVVGVFRYKNT-WPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGTAIKVM 688
            P  +V+++G GP+GL ++  AR  GA  IV+V + +    R  VAKELGA  +V  ST  +D+    ++I      G+ +  +C+G N  +  A+   R  G+V  VGMG   +   +    A    ++G   Y +T W   +  L SG I VKP+ITHR G SQ    E F+      TAIKV+
Sbjct:  174 PGQDVVVIGTGPLGLFSVQMARIMGAVNIVVVGLQEDVAVRFPVAKELGATAVVNGST--EDVVARCQQICGKDNLGLVI--ECSGANIALKQAIEMLRPNGEVVRVGMGFKPLDFSINDITAWNKSIIGHMAYDSTSWRNAIRLLASGAIKVKPMITHRIGLSQ--WREGFDAMV-DKTAIKVI 351          
BLAST of CN185769 vs. ExPASy Swiss-Prot
Match: TDH_BURPP (L-threonine 3-dehydrogenase OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=tdh PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.289e-19
Identity = 57/174 (32.76%), Postives = 97/174 (55.75%), Query Frame = -3
Query:  167 NVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAAREVDVVGVFRYK--NTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARG 679
            +VLI GAGPIG++ +  A+  GA  +VI DV+DYRL +A+++GA   V VS  +L+D+  ++      M  G DV  + +G     ++ L A   GGK+ L+G+   +  +  T    + +++ G++  +   TW   +  L+SG +D+ P++TH   F   + +EAF T   G
Sbjct:  166 DVLITGAGPIGIMAVAIAKHVGARNVVITDVNDYRLELARKMGATRAVNVSRESLRDVMADLH-----MTEGFDVGLEMSGVPSAFTSMLEAMNHGGKIALLGIPPAQTAIDWTQVIFKGLEIKGIYGREMFETWYKMVAMLQSG-LDLSPILTHH--FKVDDYQEAFATMLSG 331          
BLAST of CN185769 vs. ExPASy Swiss-Prot
Match: TDH_FRATW (L-threonine 3-dehydrogenase OS=Francisella tularensis subsp. tularensis (strain WY96-3418) GN=tdh PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 6.907e-19
Identity = 61/190 (32.11%), Postives = 103/190 (54.21%), Query Frame = -3
Query:  167 LHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS--TNLQDIAEEVEKIQKAMG--TGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAAREVDVVGVFRYK--NTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARG 718
            +H     N+  E +VLI GAGPIGL+ +  AR  GA RIVI D+++YRL +A++ GA   + V+   N  ++ +++ K+   +G   G DV  + +G N  +S  L     GGK+ L+G+   +++V       + + + G++  +   TW L    L++G +D+ P+ITHR      E ++ FE    G
Sbjct:  155 IHTALSFNLTGE-DVLITGAGPIGLMAVKIARFCGARRIVITDINEYRLQMARDFGATVALNVAPFKNQDELVKQMRKVMSDIGMTEGFDVGLEMSGINSAISMMLDVMNHGGKLSLLGISAGDISVDWGAILFKGLTLKGIYGREMFETWYLMTSMLQAG-MDMNPIITHRLHID--EFQKGFEIMKSG 340          
The following BLAST results are available for this feature:
BLAST of CN185769 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 267
Match NameE-valueIdentityDescription
DHSO2_YEAST2.368e-2735.32Sorbitol dehydrogenase 2 OS=Saccharomyces cerevisi... [more]
DHSO1_YEAST2.368e-2735.32Sorbitol dehydrogenase 1 OS=Saccharomyces cerevisi... [more]
YDJJ_ECOLI1.756e-2235.29Uncharacterized zinc-type alcohol dehydrogenase-li... [more]
XYL2_YEAST2.996e-2235.11D-xylulose reductase OS=Saccharomyces cerevisiae G... [more]
TDH_BURP81.066e-1933.33L-threonine 3-dehydrogenase OS=Burkholderia phymat... [more]
XYLD_RHILO1.818e-1931.89Putative D-xylulose reductase OS=Rhizobium loti GN... [more]
TDH_FRAP23.100e-1933.16L-threonine 3-dehydrogenase OS=Francisella philomi... [more]
YDJL_ECOLI4.049e-1935.14Uncharacterized zinc-type alcohol dehydrogenase-li... [more]
TDH_BURPP5.289e-1932.76L-threonine 3-dehydrogenase OS=Burkholderia phytof... [more]
TDH_FRATW6.907e-1932.11L-threonine 3-dehydrogenase OS=Francisella tularen... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS05_0001N12_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001N12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185769 ID=CN185769; Name=CN185769; organism=Citrus sinensis; type=EST; length=732bp
TTTTTTTTGAGAATCTGAATTTTATTTTGTAATAGATAGAAATAAAGTAA
TATGCTACACTTTGATTCATATTACTCGGCGACAATTCCATTTTATTTCA
TCTTTTGCCCAAACGTTTACTTTACGTTGTATTTTACAGATTAAACATGA
CCTTGATTGCAGTACCACCACGAGCACTTGTTTCAAAGGCCTCTTCCACT
TCTTTCTGGGAGAAACCAAACCTATGCGTGATAAGGGGCTTTACATCAAT
CTTTCCGCTTCTAAGGAACTCCAGACACAGTGGCCAGGTGTTCTTGTAGC
GAAACACCCCCACCACATCCACCTCCCTTGCAGCAGCCGGAGTGAGTGGG
ACAGTCATTTCATGATGACCCATCCCCACGAGGCAAACTTTACCACCTGC
ACGAGTAGCACTCAGTGCTGTTGACATGGTTTTGTTAAAGCCTGCACAAT
CAAAGCTCACATCTATTCCTGTCCCCATGGCTTTCTGTATCTTTTCCACT
TCTTCAGCTATGTCCTGCAAATTTGTTGAAACTTTAACAATATTATCTGC
ACCAAGTTCCTTTGCAACAGATAAACGATAGTCATCCACATCCACAATGA
CAATTCTAGGAGCTCCAAAAGCACGAGCTCCTAGCATTGTGACAAGTCCT
ATGGGCCCTGCTCCCATGATAAGCACATTTGTCTCAGGACCGATATTGGC
ACGGCGGCAGGCATGAAGACCAAACCTCAAGG
back to top