CN185735
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185735 vs. ExPASy Swiss-Prot
Match: RL17_PROMS (50S ribosomal protein L17 OS=Prochlorococcus marinus (strain AS9601) GN=rplQ PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 2.799e-33 Identity = 65/114 (57.02%), Postives = 90/114 (78.95%), Query Frame = -2 Query: 172 MRHGRRVPKLSRPPDQRRGLFGGLTTQLLKHGRIKTPRARASAVRKYVDKMITLAKDGSLHKRRQALGFIYEKQIVHALFAEVQERYGERNGGYTRIIRTLPRGGDNPPLAYIE 513 MRH R+P LS+P DQR+ L GLTTQL++ GR+ T +ARA A+R ++MI+LAK+GSL RR+A+G+IY+K++VH+LF + +ERYG+R GGYTRI+RT+ R GDN +A IE Sbjct: 1 MRHQLRIPLLSKPADQRKALLRGLTTQLIREGRVTTTKARAKALRNEAERMISLAKEGSLASRRRAIGYIYDKKLVHSLFEKAKERYGDREGGYTRIVRTVSRKGDNAQMAIIE 114
BLAST of CN185735 vs. ExPASy Swiss-Prot
Match: RL17_NOSP7 (50S ribosomal protein L17 OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=rplQ PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 2.799e-33 Identity = 69/114 (60.53%), Postives = 87/114 (76.32%), Query Frame = -2 Query: 172 MRHGRRVPKLSRPPDQRRGLFGGLTTQLLKHGRIKTPRARASAVRKYVDKMITLAKDGSLHKRRQALGFIYEKQIVHALFAEVQERYGERNGGYTRIIRTLPRGGDNPPLAYIE 513 MRH RV KLS+P DQRR L LTT+L++HG+I T RA +R V+KMITLAK+GSL RR+ALG+I++KQ+VHALF +V RYG+R GGYTRI+ T+PR GDN +A IE Sbjct: 1 MRHRCRVKKLSKPADQRRALLRSLTTELIRHGKITTTLIRAKVLRSEVEKMITLAKNGSLAARREALGYIFDKQLVHALFEQVPTRYGDRQGGYTRILHTVPRRGDNAKMAIIE 114
BLAST of CN185735 vs. ExPASy Swiss-Prot
Match: RL17_SYNSC (50S ribosomal protein L17 OS=Synechococcus sp. (strain CC9605) GN=rplQ PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 4.774e-33 Identity = 67/114 (58.77%), Postives = 86/114 (75.44%), Query Frame = -2 Query: 172 MRHGRRVPKLSRPPDQRRGLFGGLTTQLLKHGRIKTPRARASAVRKYVDKMITLAKDGSLHKRRQALGFIYEKQIVHALFAEVQERYGERNGGYTRIIRTLPRGGDNPPLAYIE 513 MRH RVP+L RP DQR+ + LTTQL++ GR+ T +ARA A+R ++MITLAKDGSL RR+A+G+IY+KQ+VHALF + RY +R GGYTRI RT+PR GDN +A IE Sbjct: 1 MRHQCRVPQLGRPADQRKAMLRALTTQLIREGRVTTTKARAKALRDEAERMITLAKDGSLASRRRAMGYIYDKQLVHALFDKAPNRYSDRKGGYTRITRTVPRRGDNAEMAIIE 114
BLAST of CN185735 vs. ExPASy Swiss-Prot
Match: RL17_SYNP6 (50S ribosomal protein L17 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=rplQ PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.369e-32 Identity = 66/114 (57.89%), Postives = 86/114 (75.44%), Query Frame = -2 Query: 172 MRHGRRVPKLSRPPDQRRGLFGGLTTQLLKHGRIKTPRARASAVRKYVDKMITLAKDGSLHKRRQALGFIYEKQIVHALFAEVQERYGERNGGYTRIIRTLPRGGDNPPLAYIE 513 MRH VP+L RP DQR+ L LTT+++++G + T +ARA AVR V++M+TLAKDGSL RRQALG+IY+KQ+VH LF + ERY +R GGYTRI+RT+ R GDN +A IE Sbjct: 1 MRHRCNVPQLGRPADQRKALLRSLTTEIIRNGTVTTTKARAKAVRSEVERMVTLAKDGSLAARRQALGYIYDKQLVHLLFEQAPERYAKRQGGYTRILRTVRRRGDNAEMAIIE 114
BLAST of CN185735 vs. ExPASy Swiss-Prot
Match: RL17_SYNE7 (50S ribosomal protein L17 OS=Synechococcus elongatus (strain PCC 7942) GN=rplQ PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.369e-32 Identity = 66/114 (57.89%), Postives = 86/114 (75.44%), Query Frame = -2 Query: 172 MRHGRRVPKLSRPPDQRRGLFGGLTTQLLKHGRIKTPRARASAVRKYVDKMITLAKDGSLHKRRQALGFIYEKQIVHALFAEVQERYGERNGGYTRIIRTLPRGGDNPPLAYIE 513 MRH VP+L RP DQR+ L LTT+++++G + T +ARA AVR V++M+TLAKDGSL RRQALG+IY+KQ+VH LF + ERY +R GGYTRI+RT+ R GDN +A IE Sbjct: 1 MRHRCNVPQLGRPADQRKALLRSLTTEIIRNGTVTTTKARAKAVRSEVERMVTLAKDGSLAARRQALGYIYDKQLVHLLFEQAPERYAKRQGGYTRILRTVRRRGDNAEMAIIE 114
BLAST of CN185735 vs. ExPASy Swiss-Prot
Match: RL17_SYNPW (50S ribosomal protein L17 OS=Synechococcus sp. (strain WH7803) GN=rplQ PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 3.095e-32 Identity = 65/114 (57.02%), Postives = 86/114 (75.44%), Query Frame = -2 Query: 172 MRHGRRVPKLSRPPDQRRGLFGGLTTQLLKHGRIKTPRARASAVRKYVDKMITLAKDGSLHKRRQALGFIYEKQIVHALFAEVQERYGERNGGYTRIIRTLPRGGDNPPLAYIE 513 MRH RVP+L RP DQR+ + GLTTQL++ GR+ T +ARA A+R ++MITLAK+GSL RR+ LG++Y+KQ+VHALF + +RY +R GGYTRI RT+ R GDN +A IE Sbjct: 1 MRHQCRVPQLGRPADQRKAMLRGLTTQLIREGRVTTTKARAKALRDEAERMITLAKEGSLASRRRVLGYVYDKQLVHALFEKAPDRYSDRKGGYTRITRTVRRRGDNAEMAIIE 114
BLAST of CN185735 vs. ExPASy Swiss-Prot
Match: RL17_SYNJA (50S ribosomal protein L17 OS=Synechococcus sp. (strain JA-3-3Ab) GN=rplQ PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 9.955e-31 Identity = 66/114 (57.89%), Postives = 83/114 (72.81%), Query Frame = -2 Query: 172 MRHGRRVPKLSRPPDQRRGLFGGLTTQLLKHGRIKTPRARASAVRKYVDKMITLAKDGSLHKRRQALGFIYEKQIVHALFAEVQERYGERNGGYTRIIRTLPRGGDNPPLAYIE 513 MRH RR P L++P DQR+ L LTT LL+ GRI T +ARA A+R +KMITLAKDGSL RRQAL +IY+K++V +LF + ERY +R GGYTRI+RT+ R GD +A IE Sbjct: 1 MRHRRRTPHLNKPADQRKALMRALTTALLREGRITTTKARAKAIRATTEKMITLAKDGSLAARRQALAYIYDKELVRSLFEQAPERYRDRPGGYTRILRTVRRRGDGAEMAVIE 114
BLAST of CN185735 vs. ExPASy Swiss-Prot
Match: RL17_SYNJB (50S ribosomal protein L17 OS=Synechococcus sp. GN=rplQ PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.896e-30 Identity = 65/114 (57.02%), Postives = 83/114 (72.81%), Query Frame = -2 Query: 172 MRHGRRVPKLSRPPDQRRGLFGGLTTQLLKHGRIKTPRARASAVRKYVDKMITLAKDGSLHKRRQALGFIYEKQIVHALFAEVQERYGERNGGYTRIIRTLPRGGDNPPLAYIE 513 MRH RR P L++P DQR+ L LTT LL+ GRI T +ARA A+R +KMITLAK+GSL RRQAL +IY+K++V +LF + ERY +R GGYTRI+RT+ R GD +A IE Sbjct: 1 MRHRRRTPHLNKPADQRKALMRALTTALLREGRITTTKARAKAIRATTEKMITLAKEGSLAARRQALAYIYDKELVRSLFEQAPERYRDRPGGYTRILRTVHRRGDGAEMAVIE 114
BLAST of CN185735 vs. ExPASy Swiss-Prot
Match: RL17_THETN (50S ribosomal protein L17 OS=Thermoanaerobacter tengcongensis GN=rplQ PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.785e-25 Identity = 58/106 (54.72%), Postives = 69/106 (65.09%), Query Frame = -2 Query: 172 KLSRPPDQRRGLFGGLTTQLLKHGRIKTPRARASAVRKYVDKMITLAKDGSLHKRRQALGFIYEKQIVHALFAEVQERYGERNGGYTRIIRTLPRGGDNPPLAYIE 489 KL RP DQRR + L T L++ RI T ARA VRK +KMITL K G LH RRQAL +I ++ +V LF ++ RY ERNGGYTRI + PR GD PLA IE Sbjct: 5 KLGRPSDQRRAMLRNLVTDFLRYERITTTEARAKEVRKIAEKMITLGKRGDLHARRQALAYILDESVVKKLFDDIAPRYKERNGGYTRIFKLGPRRGDGAPLAVIE 110
BLAST of CN185735 vs. ExPASy Swiss-Prot
Match: RL17_THEPX (50S ribosomal protein L17 OS=Thermoanaerobacter sp. (strain X514) GN=rplQ PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 3.102e-24 Identity = 56/106 (52.83%), Postives = 68/106 (64.15%), Query Frame = -2 Query: 172 KLSRPPDQRRGLFGGLTTQLLKHGRIKTPRARASAVRKYVDKMITLAKDGSLHKRRQALGFIYEKQIVHALFAEVQERYGERNGGYTRIIRTLPRGGDNPPLAYIE 489 KL RP DQRR + L T LK+GRI T ARA VR +KMITL K G LH RRQAL +I ++ +V LF E+ +Y +R GGYTRI++ PR GD PL IE Sbjct: 5 KLGRPSDQRRAMLRNLVTDFLKYGRITTTEARAKEVRSISEKMITLGKRGDLHARRQALAYILDESVVKKLFDEIAPKYKDRQGGYTRILKLGPRRGDGAPLVIIE 110 The following BLAST results are available for this feature:
BLAST of CN185735 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185735 ID=CN185735; Name=CN185735; organism=Citrus sinensis; type=EST; length=718bpback to top |